CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 560 & Codon = atA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2560I560II740IsynatCatA156783800.02423782483-2485

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2560I560IatCatA38015678All0.000073
ORF1ab/nsp2560I560IatCatA152936AY.40.000023
ORF1ab/nsp2560I560IatCatA131842B.1.1.70.000012
ORF1ab/nsp2560I560IatCatA1742B.1.617.20.000004
ORF1ab/nsp2560I560IatCatA2499AY.440.000012
ORF1ab/nsp2560I560IatCatA9476AY.250.000054
ORF1ab/nsp2560I560IatCatA296449AY.430.001311
ORF1ab/nsp2560I560IatCatA3378B.1.20.000026
ORF1ab/nsp2560I560IatCatA1284AY.1030.000006
ORF1ab/nsp2560I560IatCatA1244B.1.4290.000024
ORF1ab/nsp2560I560IatCatA1231P.10.000016
ORF1ab/nsp2560I560IatCatA2213AY.30.00002
ORF1ab/nsp2560I560IatCatA1185B.1.1770.000013
ORF1ab/nsp2560I560IatCatA1159B.1.10.000018
ORF1ab/nsp2560I560IatCatA3128B.10.000027
ORF1ab/nsp2560I560IatCatA164B.1.5260.000024
ORF1ab/nsp2560I560IatCatA136AY.260.000028
ORF1ab/nsp2560I560IatCatA129AY.390.000025
ORF1ab/nsp2560I560IatCatA124AY.750.000056
ORF1ab/nsp2560I560IatCatA123AY.450.000122
ORF1ab/nsp2560I560IatCatA117P.20.000187
ORF1ab/nsp2560I560IatCatA114AY.1000.000046
ORF1ab/nsp2560I560IatCatA114B.1.438.10.000107
ORF1ab/nsp2560I560IatCatA313AY.330.0002
ORF1ab/nsp2560I560IatCatA311AY.540.000286
ORF1ab/nsp2560I560IatCatA610AY.1200.000223
ORF1ab/nsp2560I560IatCatA16B.1.1.3060.000438
ORF1ab/nsp2560I560IatCatA26B.1.5820.000981
ORF1ab/nsp2560I560IatCatA15AY.240.000431
ORF1ab/nsp2560I560IatCatA24B0.000256
ORF1ab/nsp2560I560IatCatA33B.1.1.3370.010791
ORF1ab/nsp2560I560IatCatA11B.1.160.140.002119
ORF1ab/nsp2560I560IatCatA11P.1.100.000269