CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 560

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2560I560II740IsynatCatT15678152980.9757622483-2485
ORF1ab/nsp2560I560II740IsynatCatA156783800.02423782483-2485
ORF1ab/nsp2560I560VI740VnonsynAtcGtc3543490.9858762483-2485
ORF1ab/nsp2560I560VI740VnonsynAtCGtT35430.008474582483-2485
ORF1ab/nsp2560I560VI740VnonsynAtCGtA35420.005649722483-2485
ORF1ab/nsp2560I560TI740TnonsynaTcaCc21721712483-2485
ORF1ab/nsp2560I560delI740deldelATC---888812483-2485
ORF1ab/nsp2560I560SI740SnonsynaTcaGc1290.752483-2485
ORF1ab/nsp2560I560SI740SnonsynATcTCc1230.252483-2485
ORF1ab/nsp2560I560NI740NnonsynaTcaAc111112483-2485
ORF1ab/nsp2560I560FI740FnonsynAtcTtc1090.92483-2485
ORF1ab/nsp2560I560FI740FnonsynAtCTtT1010.12483-2485
ORF1ab/nsp2560I560MI740MnonsynatCatG5512483-2485
ORF1ab/nsp2560I560LI740LnonsynAtcCtc5512483-2485
ORF1ab/nsp2560I560GI740GnonsynATcGGc420.52483-2485
ORF1ab/nsp2560I560GI740GnonsynATCGGA420.52483-2485
ORF1ab/nsp2560I560del1I740del1delAtc-tc3312483-2485
ORF1ab/nsp2560I560RI740RnonsynATCCGT2212483-2485
ORF1ab/nsp2560I560YI740YnonsynATcTAc1112483-2485
ORF1ab/nsp2560I560del2I740del2delATc--c1112483-2485
ORF1ab/nsp2560I560PI740PnonsynATCCCT1112483-2485

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2560I560IatCatT1529815678All0.002926
ORF1ab/nsp2560I560IatCatA38015678All0.000073
ORF1ab/nsp2560I560IatCatT29212936AY.40.004546
ORF1ab/nsp2560I560IatCatA152936AY.40.000023
ORF1ab/nsp2560I560IatCatT18291842B.1.1.70.001637
ORF1ab/nsp2560I560IatCatA131842B.1.1.70.000012
ORF1ab/nsp2560I560IatCatT10061006B.1.214.20.603118
ORF1ab/nsp2560I560IatCatT868868B.1.360.126641
ORF1ab/nsp2560I560IatCatT840840AY.1100.094659
ORF1ab/nsp2560I560IatCatT741742B.1.617.20.00279
ORF1ab/nsp2560I560IatCatA1742B.1.617.20.000004
ORF1ab/nsp2560I560IatCatT685685AY.39.10.027135
ORF1ab/nsp2560I560IatCatT497499AY.440.003025
ORF1ab/nsp2560I560IatCatA2499AY.440.000012
ORF1ab/nsp2560I560IatCatT467476AY.250.002809
ORF1ab/nsp2560I560IatCatA9476AY.250.000054
ORF1ab/nsp2560I560IatCatA296449AY.430.001311
ORF1ab/nsp2560I560IatCatT153449AY.430.000678
ORF1ab/nsp2560I560IatCatT375378B.1.20.003302
ORF1ab/nsp2560I560IatCatA3378B.1.20.000026
ORF1ab/nsp2560I560VAtcGtc349354All0.000067
ORF1ab/nsp2560I560VAtCGtT3354All0.000001
ORF1ab/nsp2560I560VAtCGtA2354All0
ORF1ab/nsp2560I560IatCatT283284AY.1030.001757
ORF1ab/nsp2560I560IatCatA1284AY.1030.000006
ORF1ab/nsp2560I560IatCatT270270B.1.2430.018788
ORF1ab/nsp2560I560IatCatT243244B.1.4290.005718
ORF1ab/nsp2560I560IatCatA1244B.1.4290.000024
ORF1ab/nsp2560I560IatCatT230231P.10.003623
ORF1ab/nsp2560I560IatCatA1231P.10.000016
ORF1ab/nsp2560I560IatCatT229229C.1.20.974468
ORF1ab/nsp2560I560TaTcaCc217217All0.000042
ORF1ab/nsp2560I560IatCatT211213AY.30.002099
ORF1ab/nsp2560I560IatCatA2213AY.30.00002
ORF1ab/nsp2560I560IatCatT184185B.1.1770.002423
ORF1ab/nsp2560I560IatCatA1185B.1.1770.000013
ORF1ab/nsp2560I560IatCatT177177B.1.2580.011779
ORF1ab/nsp2560I560IatCatT166166AY.60.006827
ORF1ab/nsp2560I560IatCatT158159B.1.10.002866
ORF1ab/nsp2560I560IatCatA1159B.1.10.000018
ORF1ab/nsp2560I560IatCatT125128B.10.001145
ORF1ab/nsp2560I560IatCatA3128B.10.000027
ORF1ab/nsp2560I560IatCatT122122B.1.4270.006161
ORF1ab/nsp2560I560IatCatT119119B.1.1.5190.004726
ORF1ab/nsp2560I560delATC---8888All0.000017
ORF1ab/nsp2560I560IatCatT8787B.1.2210.00618
ORF1ab/nsp2560I560IatCatT8484B.1.4560.27451
ORF1ab/nsp2560I560IatCatT7070B.1.5610.027789
ORF1ab/nsp2560I560IatCatT6666B.1.3510.001962
ORF1ab/nsp2560I560IatCatT6565C.350.05031
ORF1ab/nsp2560I560IatCatT6364B.1.5260.001481
ORF1ab/nsp2560I560IatCatA164B.1.5260.000024
ORF1ab/nsp2560I560IatCatT6262R.10.005581
ORF1ab/nsp2560I560IatCatT5959AY.360.008745
ORF1ab/nsp2560I560IatCatT5050AY.4.20.001084
ORF1ab/nsp2560I560IatCatT4646AY.1020.00122
ORF1ab/nsp2560I560VAtcGtc4646AY.40.000072
ORF1ab/nsp2560I560IatCatT4545AY.420.00181
ORF1ab/nsp2560I560VAtcGtc4545B.1.1.70.00004
ORF1ab/nsp2560I560IatCatT4242Q.70.046667
ORF1ab/nsp2560I560IatCatT4040AY.1190.001412
ORF1ab/nsp2560I560IatCatT4040B.1.621.10.020233
ORF1ab/nsp2560I560IatCatT3939AY.710.018527
ORF1ab/nsp2560I560VAtcGtc3838AY.1030.000236
ORF1ab/nsp2560I560IatCatT3536AY.260.000991
ORF1ab/nsp2560I560IatCatA136AY.260.000028
ORF1ab/nsp2560I560IatCatT3636AY.610.003772
ORF1ab/nsp2560I560IatCatT3434AY.50.000702
ORF1ab/nsp2560I560VAtcGtc3232AY.440.000195
ORF1ab/nsp2560I560TaTcaCc3131B.1.4270.001565
ORF1ab/nsp2560I560IatCatT3030B.1.1.2140.001664
ORF1ab/nsp2560I560IatCatT3030B.1.1600.000936
ORF1ab/nsp2560I560IatCatT3030C.36.3.10.081522
ORF1ab/nsp2560I560IatCatT2929AY.140.002552
ORF1ab/nsp2560I560IatCatT2829AY.390.000692
ORF1ab/nsp2560I560IatCatA129AY.390.000025
ORF1ab/nsp2560I560IatCatT2828AY.4.50.00301
ORF1ab/nsp2560I560IatCatT2727B.1.36.80.027
ORF1ab/nsp2560I560IatCatT2525AY.99.20.002304
ORF1ab/nsp2560I560IatCatT2324AY.750.001289
ORF1ab/nsp2560I560IatCatA124AY.750.000056
ORF1ab/nsp2560I560IatCatT2424B.1.5750.007282
ORF1ab/nsp2560I560IatCatT2424P.1.150.005576
ORF1ab/nsp2560I560TaTcaCc2323AY.40.000036
ORF1ab/nsp2560I560IatCatT2223AY.450.002677
ORF1ab/nsp2560I560IatCatA123AY.450.000122
ORF1ab/nsp2560I560TaTcaCc2222B.1.1.70.00002
ORF1ab/nsp2560I560IatCatT2121AY.200.000816
ORF1ab/nsp2560I560IatCatT2121AY.640.0125
ORF1ab/nsp2560I560IatCatT2121B.1.1.2160.0187
ORF1ab/nsp2560I560IatCatT2121B.1.36.290.010864
ORF1ab/nsp2560I560IatCatT2121B.1.5960.00183
ORF1ab/nsp2560I560delATC---2020B.1.1.70.000018
ORF1ab/nsp2560I560IatCatT2020B.1.2410.016234
ORF1ab/nsp2560I560IatCatT2020B.1.617.10.002579
ORF1ab/nsp2560I560IatCatT2020P.1.140.000956
ORF1ab/nsp2560I560IatCatT1818AY.470.00056
ORF1ab/nsp2560I560IatCatT1818B.1.1.10.00588
ORF1ab/nsp2560I560IatCatT1717AY.950.012938
ORF1ab/nsp2560I560TaTcaCc1717B.1.2580.001131
ORF1ab/nsp2560I560IatCatT1617P.20.002986
ORF1ab/nsp2560I560IatCatA117P.20.000187
ORF1ab/nsp2560I560IatCatT1515AY.290.000237
ORF1ab/nsp2560I560IatCatT1515AY.740.001735
ORF1ab/nsp2560I560IatCatT1515B.1.160.90.107914
ORF1ab/nsp2560I560VAtcGtc1515B.1.4290.000353
ORF1ab/nsp2560I560IatCatT1314AY.1000.000598
ORF1ab/nsp2560I560IatCatA114AY.1000.000046
ORF1ab/nsp2560I560IatCatT1414AY.730.009315
ORF1ab/nsp2560I560VAtcGtc1314B.10.000119
ORF1ab/nsp2560I560VAtCGtT114B.10.000009
ORF1ab/nsp2560I560IatCatT1414B.1.1.280.004357
ORF1ab/nsp2560I560IatCatT1314B.1.438.10.001394
ORF1ab/nsp2560I560IatCatA114B.1.438.10.000107
ORF1ab/nsp2560I560VAtcGtc1313AY.250.000078
ORF1ab/nsp2560I560IatCatT1013AY.330.000668
ORF1ab/nsp2560I560IatCatA313AY.330.0002
ORF1ab/nsp2560I560TaTcaCc1313B.1.20.000114
ORF1ab/nsp2560I560SaTcaGc912All0.000002
ORF1ab/nsp2560I560SATcTCc312All0.000001
ORF1ab/nsp2560I560IatCatT1212AY.1110.002198
ORF1ab/nsp2560I560IatCatT1212AY.320.00639
ORF1ab/nsp2560I560VAtcGtc1212AY.39.10.000475
ORF1ab/nsp2560I560IatCatT1212AY.46.40.001974
ORF1ab/nsp2560I560IatCatT1212B.1.258.170.001248
ORF1ab/nsp2560I560VAtcGtc1212B.1.617.20.000045
ORF1ab/nsp2560I560IatCatT1212B.1.6210.001062
ORF1ab/nsp2560I560IatCatT1212C.370.001393
ORF1ab/nsp2560I560IatCatT1111AK.20.5
ORF1ab/nsp2560I560NaTcaAc1111All0.000002
ORF1ab/nsp2560I560IatCatT1111AY.230.000767
ORF1ab/nsp2560I560IatCatT811AY.540.000763
ORF1ab/nsp2560I560IatCatA311AY.540.000286
ORF1ab/nsp2560I560IatCatT1111AY.980.000869
ORF1ab/nsp2560I560IatCatT1111B.1.5950.002871
ORF1ab/nsp2560I560FAtcTtc910All0.000002
ORF1ab/nsp2560I560FAtCTtT110All0
ORF1ab/nsp2560I560IatCatA610AY.1200.000223
ORF1ab/nsp2560I560IatCatT410AY.1200.000149
ORF1ab/nsp2560I560VAtcGtc1010AY.290.000158
ORF1ab/nsp2560I560IatCatT1010B.1.1.3170.004117
ORF1ab/nsp2560I560IatCatT1010B.1.1.3500.4
ORF1ab/nsp2560I560IatCatT99A.23.10.006338
ORF1ab/nsp2560I560IatCatT99AY.1090.006657
ORF1ab/nsp2560I560IatCatT99AY.4.2.10.001341
ORF1ab/nsp2560I560IatCatT99B.1.36.260.025714
ORF1ab/nsp2560I560IatCatT99C.36.30.005105
ORF1ab/nsp2560I560IatCatT88AY.1170.000676
ORF1ab/nsp2560I560IatCatT88AY.570.005249
ORF1ab/nsp2560I560IatCatT88B.1.1.250.004548
ORF1ab/nsp2560I560IatCatT88B.1.177.810.001515
ORF1ab/nsp2560I560IatCatT88B.1.5650.006483
ORF1ab/nsp2560I560IatCatT88Q.80.001319
ORF1ab/nsp2560I560IatCatT77AY.34.10.00357
ORF1ab/nsp2560I560VAtcGtc77AY.430.000031
ORF1ab/nsp2560I560TaTcaCc77AY.46.60.000505
ORF1ab/nsp2560I560IatCatT77AY.75.10.001262
ORF1ab/nsp2560I560IatCatT77B.1.36.190.064815
ORF1ab/nsp2560I560IatCatT77B.1.6090.003356
ORF1ab/nsp2560I560TaTcaCc77B.1.617.20.000026
ORF1ab/nsp2560I560IatCatT66AY.1140.001387
ORF1ab/nsp2560I560IatCatT66AY.23.10.002504
ORF1ab/nsp2560I560VAtcGtc66AY.30.00006
ORF1ab/nsp2560I560TaTcaCc66AY.30.00006
ORF1ab/nsp2560I560IatCatT66AY.340.000582
ORF1ab/nsp2560I560IatCatT66AY.880.005305
ORF1ab/nsp2560I560IatCatT66AY.90.000406
ORF1ab/nsp2560I560IatCatT66AY.9.10.000502
ORF1ab/nsp2560I560TaTcaCc66B.10.000055
ORF1ab/nsp2560I560IatCatT56B.1.1.3060.002192
ORF1ab/nsp2560I560IatCatA16B.1.1.3060.000438
ORF1ab/nsp2560I560TaTcaCc66B.1.1.5190.000238
ORF1ab/nsp2560I560IatCatT66B.1.177.210.000459
ORF1ab/nsp2560I560IatCatT66B.1.177.40.001266
ORF1ab/nsp2560I560IatCatT66B.1.2340.000792
ORF1ab/nsp2560I560IatCatT66B.1.2400.001293
ORF1ab/nsp2560I560IatCatT46B.1.5820.001963
ORF1ab/nsp2560I560IatCatA26B.1.5820.000981
ORF1ab/nsp2560I560MatCatG55All0.000001
ORF1ab/nsp2560I560LAtcCtc55All0.000001
ORF1ab/nsp2560I560IatCatT55AY.100.00265
ORF1ab/nsp2560I560IatCatT55AY.1130.000712
ORF1ab/nsp2560I560VAtcGtc55AY.200.000194
ORF1ab/nsp2560I560IatCatT45AY.240.001724
ORF1ab/nsp2560I560IatCatA15AY.240.000431
ORF1ab/nsp2560I560delATC---55AY.40.000008
ORF1ab/nsp2560I560IatCatT55AY.460.00052
ORF1ab/nsp2560I560IatCatT55AY.7.10.000564
ORF1ab/nsp2560I560IatCatT55AY.840.002187
ORF1ab/nsp2560I560IatCatT55AY.9.20.000184
ORF1ab/nsp2560I560IatCatT55AY.900.003422
ORF1ab/nsp2560I560IatCatT55AY.930.001365
ORF1ab/nsp2560I560delATC---55B.10.000046
ORF1ab/nsp2560I560IatCatT55B.1.1.4860.007886
ORF1ab/nsp2560I560VAtcGtc55B.1.20.000044
ORF1ab/nsp2560I560NaTcaAc55B.1.3460.006553
ORF1ab/nsp2560I560IatCatT55B.1.5230.012255
ORF1ab/nsp2560I560IatCatT55B.1.5250.000566
ORF1ab/nsp2560I560delATC---55B.1.617.20.000019
ORF1ab/nsp2560I560IatCatT55C.10.011962
ORF1ab/nsp2560I560IatCatT55Q.40.002274
ORF1ab/nsp2560I560delATC---440.222222
ORF1ab/nsp2560I560VAtCGtA240.111111
ORF1ab/nsp2560I560VAtcGtc240.111111
ORF1ab/nsp2560I560GATcGGc240.111111
ORF1ab/nsp2560I560GATCGGA240.111111
ORF1ab/nsp2560I560GATcGGc24All0
ORF1ab/nsp2560I560GATCGGA24All0
ORF1ab/nsp2560I560IatCatT44AY.1010.001962
ORF1ab/nsp2560I560VAtcGtc44AY.1020.000106
ORF1ab/nsp2560I560IatCatT44AY.1080.00441
ORF1ab/nsp2560I560IatCatT44AY.1180.000251
ORF1ab/nsp2560I560IatCatT44AY.120.001264
ORF1ab/nsp2560I560TaTcaCc44AY.200.000155
ORF1ab/nsp2560I560IatCatT44AY.270.000259
ORF1ab/nsp2560I560VAtcGtc44AY.470.000124
ORF1ab/nsp2560I560IatCatT44AY.670.001857
ORF1ab/nsp2560I560IatCatT44AY.700.000834
ORF1ab/nsp2560I560IatCatT44AY.98.10.000194
ORF1ab/nsp2560I560VAtcGtc44AY.99.20.000369
ORF1ab/nsp2560I560IatCatA24B0.000256
ORF1ab/nsp2560I560IatCatT24B0.000256
ORF1ab/nsp2560I560IatCatT44B.1.1.1760.001757
ORF1ab/nsp2560I560IatCatT44B.1.1.2220.000816
ORF1ab/nsp2560I560IatCatT44B.1.1.3180.001207
ORF1ab/nsp2560I560IatCatT44B.1.1640.059701
ORF1ab/nsp2560I560IatCatT44B.1.177.600.000874
ORF1ab/nsp2560I560IatCatT44B.1.177.860.000734
ORF1ab/nsp2560I560IatCatT44B.1.4090.003125
ORF1ab/nsp2560I560VAtcGtc44B.1.4270.000202
ORF1ab/nsp2560I560VAtcGtc44B.1.5950.001044
ORF1ab/nsp2560I560IatCatT33A0.001161
ORF1ab/nsp2560I560IatCatT33AD.20.000657
ORF1ab/nsp2560I560del1Atc-tc33All0.000001
ORF1ab/nsp2560I560TaTcaCc33AY.1030.000019
ORF1ab/nsp2560I560IatCatT33AY.1060.001005
ORF1ab/nsp2560I560IatCatT33AY.1070.001398
ORF1ab/nsp2560I560IatCatT33AY.1160.00086
ORF1ab/nsp2560I560IatCatT33AY.130.000483
ORF1ab/nsp2560I560IatCatT33AY.29.10.000662
ORF1ab/nsp2560I560IatCatT33AY.3.10.000256
ORF1ab/nsp2560I560IatCatT33AY.300.001187
ORF1ab/nsp2560I560IatCatT33AY.400.002893
ORF1ab/nsp2560I560IatCatT33AY.410.000882
ORF1ab/nsp2560I560TaTcaCc33AY.430.000013
ORF1ab/nsp2560I560IatCatT33AY.590.001589
ORF1ab/nsp2560I560IatCatT33AY.630.001161
ORF1ab/nsp2560I560VAtcGtc33B.1.10.000054
ORF1ab/nsp2560I560TaTcaCc33B.1.10.000054
ORF1ab/nsp2560I560IatCatT33B.1.1.100.003344
ORF1ab/nsp2560I560IatCatT33B.1.1.1890.004539
ORF1ab/nsp2560I560IatCatT33B.1.1.2200.005576
ORF1ab/nsp2560I560IatCatT33B.1.1.2840.000322
ORF1ab/nsp2560I560delATC---33B.1.1.330.001263
ORF1ab/nsp2560I560IatCatA33B.1.1.3370.010791
ORF1ab/nsp2560I560IatCatT33B.1.1.3480.002389
ORF1ab/nsp2560I560TaTcaCc33B.1.1.370.000579
ORF1ab/nsp2560I560IatCatT33B.1.1.500.002037
ORF1ab/nsp2560I560IatCatT33B.1.1.540.009063
ORF1ab/nsp2560I560LAtcCtc33B.1.1.70.000003
ORF1ab/nsp2560I560IatCatT33B.1.177.120.000455
ORF1ab/nsp2560I560IatCatT33B.1.177.570.000843
ORF1ab/nsp2560I560IatCatT33B.1.177.70.000495
ORF1ab/nsp2560I560IatCatT33B.1.177.750.003122
ORF1ab/nsp2560I560TaTcaCc33B.1.177.810.000568
ORF1ab/nsp2560I560VAtcGtc33B.1.2340.000396
ORF1ab/nsp2560I560VAtcGtc33B.1.2910.057692
ORF1ab/nsp2560I560TaTcaCc33B.1.3510.000089
ORF1ab/nsp2560I560IatCatT33B.1.3750.002459
ORF1ab/nsp2560I560IatCatT33B.1.466.20.001174
ORF1ab/nsp2560I560TaTcaCc33B.1.5750.00091
ORF1ab/nsp2560I560IatCatT33B.1.5900.013636
ORF1ab/nsp2560I560IatCatT33C.60.111111
ORF1ab/nsp2560I560IatCatT33D.20.000225
ORF1ab/nsp2560I560VAtcGtc33P.10.000047
ORF1ab/nsp2560I560IatCatT33P.1.170.000485
ORF1ab/nsp2560I560TaTcaCc33P.20.00056
ORF1ab/nsp2560I560RATCCGT220.111111
ORF1ab/nsp2560I560IatCatT22AE.80.000978
ORF1ab/nsp2560I560RATCCGT22All0
ORF1ab/nsp2560I560IatCatT22AY.10.000791
ORF1ab/nsp2560I560VAtcGtc22AY.1190.000071
ORF1ab/nsp2560I560IatCatT22AY.150.004444
ORF1ab/nsp2560I560delATC---22AY.250.000012
ORF1ab/nsp2560I560VAtcGtc22AY.260.000057
ORF1ab/nsp2560I560TaTcaCc22AY.300.000791
ORF1ab/nsp2560I560IatCatT22AY.380.000999
ORF1ab/nsp2560I560VAtcGtc22AY.390.000049
ORF1ab/nsp2560I560VAtcGtc22AY.4.50.000215
ORF1ab/nsp2560I560FAtcTtc22AY.430.000009
ORF1ab/nsp2560I560delATC---22AY.430.000009
ORF1ab/nsp2560I560IatCatT22AY.46.10.002053
ORF1ab/nsp2560I560IatCatT22AY.46.60.000144
ORF1ab/nsp2560I560TaTcaCc22AY.470.000062
ORF1ab/nsp2560I560delATC---22AY.50.000041
ORF1ab/nsp2560I560IatCatT22AY.5.40.000553
ORF1ab/nsp2560I560IatCatT22AY.530.000575
ORF1ab/nsp2560I560IatCatT22AY.550.001835
ORF1ab/nsp2560I560VAtCGtT22AY.60.000082
ORF1ab/nsp2560I560IatCatT22AY.600.001876
ORF1ab/nsp2560I560IatCatT22AY.690.000373
ORF1ab/nsp2560I560VAtcGtc22AY.750.000112
ORF1ab/nsp2560I560IatCatT22AY.860.00166
ORF1ab/nsp2560I560TaTcaCc22AY.980.000158
ORF1ab/nsp2560I560TaTcaCc22AY.98.10.000097
ORF1ab/nsp2560I560IatCatT22AY.99.10.003106
ORF1ab/nsp2560I560TaTcaCc22AY.99.20.000184
ORF1ab/nsp2560I560IatCatT22AZ.20.001642
ORF1ab/nsp2560I560SATcTCc22B.10.000018
ORF1ab/nsp2560I560delATC---22B.1.10.000036
ORF1ab/nsp2560I560IatCatT22B.1.1.2800.006173
ORF1ab/nsp2560I560IatCatT22B.1.1.3160.00185
ORF1ab/nsp2560I560IatCatT22B.1.1.330.000842
ORF1ab/nsp2560I560IatCatT22B.1.1.3350.025974
ORF1ab/nsp2560I560delATC---22B.1.1.3480.001592
ORF1ab/nsp2560I560VAtcGtc22B.1.1.370.000386
ORF1ab/nsp2560I560IatCatT22B.1.1.370.000386
ORF1ab/nsp2560I560IatCatT22B.1.1.3750.02381
ORF1ab/nsp2560I560IatCatT22B.1.1.3980.006452
ORF1ab/nsp2560I560IatCatT22B.1.1.4340.000697
ORF1ab/nsp2560I560IatCatT22B.1.1.700.000682
ORF1ab/nsp2560I560IatCatT22B.1.110.30.001437
ORF1ab/nsp2560I560TaTcaCc22B.1.160.140.004237
ORF1ab/nsp2560I560delATC---22B.1.1770.000026
ORF1ab/nsp2560I560TaTcaCc22B.1.1770.000026
ORF1ab/nsp2560I560TaTcaCc22B.1.177.210.000153
ORF1ab/nsp2560I560IatCatT22B.1.177.410.005
ORF1ab/nsp2560I560IatCatT22B.1.177.730.001133
ORF1ab/nsp2560I560IatCatT22B.1.177.790.004684
ORF1ab/nsp2560I560IatCatT22B.1.177.830.002963
ORF1ab/nsp2560I560IatCatT22B.1.177.90.002663
ORF1ab/nsp2560I560IatCatT22B.1.1890.008584
ORF1ab/nsp2560I560VAtcGtc22B.1.2060.001631
ORF1ab/nsp2560I560IatCatT22B.1.214.30.014286
ORF1ab/nsp2560I560IatCatT22B.1.3050.004301
ORF1ab/nsp2560I560VAtcGtc22B.1.360.000292
ORF1ab/nsp2560I560IatCatT22B.1.36.250.004415
ORF1ab/nsp2560I560IatCatT22B.1.36.310.003503
ORF1ab/nsp2560I560IatCatT22B.1.3960.001411
ORF1ab/nsp2560I560IatCatT22B.1.3980.005952
ORF1ab/nsp2560I560IatCatT22B.1.4040.002604
ORF1ab/nsp2560I560VAtcGtc22B.1.4060.012121
ORF1ab/nsp2560I560delATC---22B.1.4240.016129
ORF1ab/nsp2560I560IatCatT22B.1.428.30.025641
ORF1ab/nsp2560I560delATC---22B.1.4290.000047
ORF1ab/nsp2560I560VAtcGtc22B.1.4970.00063
ORF1ab/nsp2560I560IatCatT22B.1.5090.001732
ORF1ab/nsp2560I560IatCatT22B.1.5640.000852
ORF1ab/nsp2560I560VAtcGtc22B.1.617.10.000258
ORF1ab/nsp2560I560TaTcaCc22B.1.617.10.000258
ORF1ab/nsp2560I560IatCatT22B.1.6200.001892
ORF1ab/nsp2560I560IatCatT22B.1.6280.000705
ORF1ab/nsp2560I560VAtcGtc22B.1.6370.000146
ORF1ab/nsp2560I560IatCatT22B.110.010256
ORF1ab/nsp2560I560IatCatT22B.6.60.001778
ORF1ab/nsp2560I560delATC---22N.60.014184
ORF1ab/nsp2560I560TaTcaCc22P.10.000032
ORF1ab/nsp2560I560IatCatT22P.1.70.000639
ORF1ab/nsp2560I560TaTcaCc22P.50.027397
ORF1ab/nsp2560I560IatCatT22Q.30.00029
ORF1ab/nsp2560I560VAtcGtc22Q.80.00033
ORF1ab/nsp2560I560VAtcGtc22R.10.00018
ORF1ab/nsp2560I560SaTcaGc11A0.000387
ORF1ab/nsp2560I560IatCatT11A.10.000282
ORF1ab/nsp2560I560VAtcGtc11A.180.05
ORF1ab/nsp2560I560IatCatT11A.190.009434
ORF1ab/nsp2560I560TaTcaCc11A.2.50.000499
ORF1ab/nsp2560I560MatCatG11A.60.005128
ORF1ab/nsp2560I560PATCCCT11All0
ORF1ab/nsp2560I560YATcTAc11All0
ORF1ab/nsp2560I560del2ATc--c11All0
ORF1ab/nsp2560I560IatCatT11AM.40.003571
ORF1ab/nsp2560I560IatCatT11AT.10.005128
ORF1ab/nsp2560I560VAtcGtc11AV.10.005051
ORF1ab/nsp2560I560TaTcaCc11AY.10.000396
ORF1ab/nsp2560I560TaTcaCc11AY.1000.000046
ORF1ab/nsp2560I560TaTcaCc11AY.1020.000027
ORF1ab/nsp2560I560FAtCTtT11AY.1030.000006
ORF1ab/nsp2560I560IatCatT11AY.1040.001984
ORF1ab/nsp2560I560delATC---11AY.1080.001103
ORF1ab/nsp2560I560VAtcGtc11AY.1090.00074
ORF1ab/nsp2560I560TaTcaCc11AY.1090.00074
ORF1ab/nsp2560I560IatCatT11AY.110.001339
ORF1ab/nsp2560I560delATC---11AY.1130.000142
ORF1ab/nsp2560I560IatCatT11AY.116.10.000311
ORF1ab/nsp2560I560TaTcaCc11AY.1190.000035
ORF1ab/nsp2560I560VAtcGtc11AY.1200.000037
ORF1ab/nsp2560I560IatCatT11AY.120.10.000321
ORF1ab/nsp2560I560IatCatT11AY.120.2.10.000498
ORF1ab/nsp2560I560IatCatT11AY.1210.000135
ORF1ab/nsp2560I560IatCatT11AY.160.00038
ORF1ab/nsp2560I560IatCatT11AY.170.008197
ORF1ab/nsp2560I560delATC---11AY.190.00114
ORF1ab/nsp2560I560TaTcaCc11AY.230.00007
ORF1ab/nsp2560I560VAtcGtc11AY.240.000431
ORF1ab/nsp2560I560TaTcaCc11AY.250.000006
ORF1ab/nsp2560I560SaTcaGc11AY.260.000028
ORF1ab/nsp2560I560TaTcaCc11AY.260.000028
ORF1ab/nsp2560I560SaTcaGc11AY.270.000065
ORF1ab/nsp2560I560SaTcaGc11AY.30.00001
ORF1ab/nsp2560I560delATC---11AY.30.00001
ORF1ab/nsp2560I560SaTcaGc11AY.320.000532
ORF1ab/nsp2560I560IatCatT11AY.350.000233
ORF1ab/nsp2560I560VAtcGtc11AY.360.000148
ORF1ab/nsp2560I560IatCatT11AY.370.000316
ORF1ab/nsp2560I560TaTcaCc11AY.39.10.00004
ORF1ab/nsp2560I560MatCatG11AY.40.000002
ORF1ab/nsp2560I560IatCatT11AY.4.40.000409
ORF1ab/nsp2560I560VAtcGtc11AY.420.00004
ORF1ab/nsp2560I560delATC---11AY.420.00004
ORF1ab/nsp2560I560TaTcaCc11AY.440.000006
ORF1ab/nsp2560I560delATC---11AY.440.000006
ORF1ab/nsp2560I560delATC---11AY.460.000104
ORF1ab/nsp2560I560IatCatT11AY.46.20.000635
ORF1ab/nsp2560I560IatCatT11AY.46.50.000198
ORF1ab/nsp2560I560VAtcGtc11AY.46.60.000072
ORF1ab/nsp2560I560delATC---11AY.46.60.000072
ORF1ab/nsp2560I560IatCatT11AY.480.000465
ORF1ab/nsp2560I560VAtcGtc11AY.50.000021
ORF1ab/nsp2560I560IatCatT11AY.5.30.000337
ORF1ab/nsp2560I560TaTcaCc11AY.5.40.000277
ORF1ab/nsp2560I560VAtcGtc11AY.510.000909
ORF1ab/nsp2560I560IatCatT11AY.520.000814
ORF1ab/nsp2560I560VAtcGtc11AY.550.000917
ORF1ab/nsp2560I560IatCatT11AY.560.001605
ORF1ab/nsp2560I560IatCatT11AY.580.000907
ORF1ab/nsp2560I560delATC---11AY.60.000041
ORF1ab/nsp2560I560VAtcGtc11AY.610.000105
ORF1ab/nsp2560I560SaTcaGc11AY.620.000436
ORF1ab/nsp2560I560IatCatT11AY.620.000436
ORF1ab/nsp2560I560IatCatT11AY.650.000533
ORF1ab/nsp2560I560LAtcCtc11AY.670.000464
ORF1ab/nsp2560I560IatCatT11AY.680.000274
ORF1ab/nsp2560I560TaTcaCc11AY.70.000196
ORF1ab/nsp2560I560IatCatT11AY.7.20.000559
ORF1ab/nsp2560I560TaTcaCc11AY.700.000209
ORF1ab/nsp2560I560IatCatT11AY.720.001361
ORF1ab/nsp2560I560IatCatT11AY.800.001129
ORF1ab/nsp2560I560delATC---11AY.840.000437
ORF1ab/nsp2560I560IatCatT11AY.850.000427
ORF1ab/nsp2560I560TaTcaCc11AY.850.000427
ORF1ab/nsp2560I560IatCatT11AY.870.000833
ORF1ab/nsp2560I560delATC---11AY.9.20.000037
ORF1ab/nsp2560I560VAtcGtc11AY.9.20.000037
ORF1ab/nsp2560I560IatCatT11AY.920.000287
ORF1ab/nsp2560I560VAtcGtc11AY.98.10.000048
ORF1ab/nsp2560I560IatCatT11AY.990.001049
ORF1ab/nsp2560I560delATC---11AY.990.001049
ORF1ab/nsp2560I560TaTcaCc11AZ.30.00152
ORF1ab/nsp2560I560FAtcTtc11B0.000128
ORF1ab/nsp2560I560MatCatG11B.10.000009
ORF1ab/nsp2560I560del1Atc-tc11B.10.000009
ORF1ab/nsp2560I560NaTcaAc11B.10.000009
ORF1ab/nsp2560I560LAtcCtc11B.1.10.000018
ORF1ab/nsp2560I560FAtcTtc11B.1.10.000018
ORF1ab/nsp2560I560IatCatT11B.1.1.1320.014925
ORF1ab/nsp2560I560IatCatT11B.1.1.1710.003676
ORF1ab/nsp2560I560VAtcGtc11B.1.1.1740.003378
ORF1ab/nsp2560I560IatCatT11B.1.1.1740.003378
ORF1ab/nsp2560I560IatCatT11B.1.1.1770.019231
ORF1ab/nsp2560I560IatCatT11B.1.1.2310.003096
ORF1ab/nsp2560I560IatCatT11B.1.1.2540.011236
ORF1ab/nsp2560I560IatCatT11B.1.1.2690.001353
ORF1ab/nsp2560I560TaTcaCc11B.1.1.2730.006757
ORF1ab/nsp2560I560IatCatT11B.1.1.2770.000759
ORF1ab/nsp2560I560TaTcaCc11B.1.1.2890.002083
ORF1ab/nsp2560I560IatCatT11B.1.1.2940.001266
ORF1ab/nsp2560I560IatCatT11B.1.1.3040.002809
ORF1ab/nsp2560I560IatCatT11B.1.1.3110.000358
ORF1ab/nsp2560I560NaTcaAc11B.1.1.3180.000302
ORF1ab/nsp2560I560IatCatT11B.1.1.3260.001761
ORF1ab/nsp2560I560IatCatT11B.1.1.3530.020833
ORF1ab/nsp2560I560IatCatT11B.1.1.3720.000689
ORF1ab/nsp2560I560IatCatT11B.1.1.3770.001381
ORF1ab/nsp2560I560IatCatT11B.1.1.3780.007299
ORF1ab/nsp2560I560IatCatT11B.1.1.3850.004464
ORF1ab/nsp2560I560FAtcTtc11B.1.1.390.00051
ORF1ab/nsp2560I560IatCatT11B.1.1.3970.002252
ORF1ab/nsp2560I560IatCatT11B.1.1.4020.011111
ORF1ab/nsp2560I560delATC---11B.1.1.4160.000905
ORF1ab/nsp2560I560IatCatT11B.1.1.440.00241
ORF1ab/nsp2560I560delATC---11B.1.1.4480.002033
ORF1ab/nsp2560I560IatCatT11B.1.1.4480.002033
ORF1ab/nsp2560I560TaTcaCc11B.1.1.460.004367
ORF1ab/nsp2560I560IatCatT11B.1.1.4610.012048
ORF1ab/nsp2560I560IatCatT11B.1.1.4640.001473
ORF1ab/nsp2560I560IatCatT11B.1.1.4810.071429
ORF1ab/nsp2560I560IatCatT11B.1.1.4850.016667
ORF1ab/nsp2560I560IatCatT11B.1.1.490.017544
ORF1ab/nsp2560I560IatCatT11B.1.1.5170.006803
ORF1ab/nsp2560I560VAtcGtc11B.1.1.540.003021
ORF1ab/nsp2560I560del2ATc--c11B.1.1.70.000001
ORF1ab/nsp2560I560SaTcaGc11B.1.1.70.000001
ORF1ab/nsp2560I560MatCatG11B.1.1.70.000001
ORF1ab/nsp2560I560NaTcaAc11B.1.1.70.000001
ORF1ab/nsp2560I560TaTcaCc11B.1.1110.001175
ORF1ab/nsp2560I560IatCatT11B.1.1310.008772
ORF1ab/nsp2560I560TaTcaCc11B.1.1600.000031
ORF1ab/nsp2560I560IatCatA11B.1.160.140.002119
ORF1ab/nsp2560I560IatCatT11B.1.160.220.006757
ORF1ab/nsp2560I560IatCatT11B.1.1620.005025
ORF1ab/nsp2560I560IatCatT11B.1.1650.011905
ORF1ab/nsp2560I560SATcTCc11B.1.1670.007812
ORF1ab/nsp2560I560IatCatT11B.1.1700.00431
ORF1ab/nsp2560I560MatCatG11B.1.1770.000013
ORF1ab/nsp2560I560SaTcaGc11B.1.1770.000013
ORF1ab/nsp2560I560IatCatT11B.1.177.100.000878
ORF1ab/nsp2560I560IatCatT11B.1.177.160.000664
ORF1ab/nsp2560I560IatCatT11B.1.177.200.001517
ORF1ab/nsp2560I560delATC---11B.1.177.430.001477
ORF1ab/nsp2560I560TaTcaCc11B.1.177.440.000519
ORF1ab/nsp2560I560IatCatT11B.1.177.530.002392
ORF1ab/nsp2560I560VAtcGtc11B.1.177.570.000281
ORF1ab/nsp2560I560delATC---11B.1.177.570.000281
ORF1ab/nsp2560I560IatCatT11B.1.177.670.007634
ORF1ab/nsp2560I560IatCatT11B.1.177.80.000752
ORF1ab/nsp2560I560delATC---11B.1.177.830.001481
ORF1ab/nsp2560I560NaTcaAc11B.1.177.870.000728
ORF1ab/nsp2560I560FAtcTtc11B.1.177.870.000728
ORF1ab/nsp2560I560YATcTAc11B.1.177.870.000728
ORF1ab/nsp2560I560delATC---11B.1.1790.003759
ORF1ab/nsp2560I560delATC---11B.1.20.000009
ORF1ab/nsp2560I560IatCatT11B.1.214.10.02
ORF1ab/nsp2560I560VAtcGtc11B.1.220.001318
ORF1ab/nsp2560I560delATC---11B.1.2210.000071
ORF1ab/nsp2560I560IatCatT11B.1.2230.002778
ORF1ab/nsp2560I560IatCatT11B.1.2320.000537
ORF1ab/nsp2560I560del1Atc-tc11B.1.2340.000132
ORF1ab/nsp2560I560IatCatT11B.1.2390.001221
ORF1ab/nsp2560I560IatCatT11B.1.258.110.000396
ORF1ab/nsp2560I560IatCatT11B.1.258.140.00098
ORF1ab/nsp2560I560delATC---11B.1.258.30.001675
ORF1ab/nsp2560I560IatCatT11B.1.2600.003344
ORF1ab/nsp2560I560VAtcGtc11B.1.2790.000514
ORF1ab/nsp2560I560SaTcaGc11B.1.2790.000514
ORF1ab/nsp2560I560TaTcaCc11B.1.3060.005714
ORF1ab/nsp2560I560IatCatT11B.1.3290.000608
ORF1ab/nsp2560I560IatCatT11B.1.3360.002439
ORF1ab/nsp2560I560IatCatT11B.1.3380.008621
ORF1ab/nsp2560I560IatCatT11B.1.3490.000715
ORF1ab/nsp2560I560VAtcGtc11B.1.3510.00003
ORF1ab/nsp2560I560IatCatT11B.1.351.50.0006
ORF1ab/nsp2560I560VAtcGtc11B.1.351.50.0006
ORF1ab/nsp2560I560TaTcaCc11B.1.360.000146
ORF1ab/nsp2560I560IatCatT11B.1.36.10.00114
ORF1ab/nsp2560I560delATC---11B.1.36.180.00042
ORF1ab/nsp2560I560VAtcGtc11B.1.36.180.00042
ORF1ab/nsp2560I560IatCatT11B.1.36.180.00042
ORF1ab/nsp2560I560IatCatT11B.1.36.220.001208
ORF1ab/nsp2560I560VAtcGtc11B.1.36.290.000517
ORF1ab/nsp2560I560IatCatT11B.1.36.360.000602
ORF1ab/nsp2560I560FAtcTtc11B.1.36.80.001
ORF1ab/nsp2560I560IatCatT11B.1.3670.000792
ORF1ab/nsp2560I560IatCatT11B.1.4000.000429
ORF1ab/nsp2560I560IatCatT11B.1.4080.00369
ORF1ab/nsp2560I560IatCatT11B.1.4110.003704
ORF1ab/nsp2560I560IatCatT11B.1.415.10.007576
ORF1ab/nsp2560I560IatCatT11B.1.416.10.001563
ORF1ab/nsp2560I560IatCatT11B.1.4260.001009
ORF1ab/nsp2560I560TaTcaCc11B.1.4290.000024
ORF1ab/nsp2560I560IatCatT11B.1.4320.011236
ORF1ab/nsp2560I560TaTcaCc11B.1.438.10.000107
ORF1ab/nsp2560I560VAtcGtc11B.1.4590.004082
ORF1ab/nsp2560I560IatCatT11B.1.4700.001404
ORF1ab/nsp2560I560IatCatT11B.1.4710.002732
ORF1ab/nsp2560I560IatCatT11B.1.4990.00105
ORF1ab/nsp2560I560IatCatT11B.1.5070.011236
ORF1ab/nsp2560I560TaTcaCc11B.1.5090.000866
ORF1ab/nsp2560I560IatCatT11B.1.5170.000427
ORF1ab/nsp2560I560IatCatT11B.1.5600.00463
ORF1ab/nsp2560I560delATC---11B.1.5610.000397
ORF1ab/nsp2560I560TaTcaCc11B.1.5640.000426
ORF1ab/nsp2560I560IatCatT11B.1.564.10.001577
ORF1ab/nsp2560I560IatCatT11B.1.5760.000907
ORF1ab/nsp2560I560IatCatT11B.1.5770.000687
ORF1ab/nsp2560I560IatCatT11B.1.5850.027778
ORF1ab/nsp2560I560IatCatT11B.1.5870.001898
ORF1ab/nsp2560I560IatCatT11B.1.5880.00091
ORF1ab/nsp2560I560NaTcaAc11B.1.5950.000261
ORF1ab/nsp2560I560IatCatT11B.1.595.10.005848
ORF1ab/nsp2560I560TaTcaCc11B.1.5960.000087
ORF1ab/nsp2560I560VAtcGtc11B.1.5960.000087
ORF1ab/nsp2560I560VAtcGtc11B.1.5970.00463
ORF1ab/nsp2560I560VAtcGtc11B.1.6090.000479
ORF1ab/nsp2560I560IatCatT11B.1.6100.003546
ORF1ab/nsp2560I560IatCatT11B.1.6120.002653
ORF1ab/nsp2560I560PATCCCT11B.1.617.10.000129
ORF1ab/nsp2560I560delATC---11B.1.617.30.002985
ORF1ab/nsp2560I560delATC---11B.1.6210.000089
ORF1ab/nsp2560I560IatCatT11B.1.6230.000536
ORF1ab/nsp2560I560FAtcTtc11B.1.6280.000352
ORF1ab/nsp2560I560IatCatT11B.1.80.001972
ORF1ab/nsp2560I560NaTcaAc11B.1.90.006173
ORF1ab/nsp2560I560del1Atc-tc11B.340.013699
ORF1ab/nsp2560I560IatCatT11B.40.002208
ORF1ab/nsp2560I560IatCatT11B.550.00295
ORF1ab/nsp2560I560delATC---11B.570.015152
ORF1ab/nsp2560I560IatCatT11N.50.001767
ORF1ab/nsp2560I560delATC---11P.10.000016
ORF1ab/nsp2560I560FAtcTtc11P.10.000016
ORF1ab/nsp2560I560IatCatT11P.1.10.000318
ORF1ab/nsp2560I560IatCatA11P.1.100.000269
ORF1ab/nsp2560I560IatCatT11P.1.10.10.00813
ORF1ab/nsp2560I560IatCatT11P.1.120.000484
ORF1ab/nsp2560I560VAtcGtc11P.1.140.000048
ORF1ab/nsp2560I560IatCatT11P.1.160.000374
ORF1ab/nsp2560I560IatCatT11P.1.20.001156
ORF1ab/nsp2560I560IatCatT11P.1.40.000977
ORF1ab/nsp2560I560delATC---11P.20.000187
ORF1ab/nsp2560I560IatCatT11Q.10.000126
ORF1ab/nsp2560I560IatCatT11W.40.001351