CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 559 & Codon = aGt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2559I559SI739SnonsynaTtaGt12110.9166672480-2482

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2559I559SaTtaGt1112All0.000002
ORF1ab/nsp2559I559SaTtaGt220.111111
ORF1ab/nsp2559I559SaTtaGt22B.1.10.000036
ORF1ab/nsp2559I559SaTtaGt22B.1.1.70.000002
ORF1ab/nsp2559I559SaTtaGt11A.60.005128
ORF1ab/nsp2559I559SaTtaGt11AY.34.10.00051
ORF1ab/nsp2559I559SaTtaGt11AY.390.000025
ORF1ab/nsp2559I559SaTtaGt11AY.40.000002
ORF1ab/nsp2559I559SaTtaGt11B.1.1600.000031