CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 554 & Codon = aaC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2554K554NK734NnonsynaaAaaC1391100.7913672465-2467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2554K554NaaAaaC110139All0.000021
ORF1ab/nsp2554K554NaaAaaC3131B.1.177.370.837838
ORF1ab/nsp2554K554NaaAaaC2727AY.1130.003845
ORF1ab/nsp2554K554NaaAaaC1419B.1.1.70.000013
ORF1ab/nsp2554K554NaaAaaC810AY.30.00008
ORF1ab/nsp2554K554NaaAaaC25AY.430.000009
ORF1ab/nsp2554K554NaaAaaC34AY.250.000018
ORF1ab/nsp2554K554NaaAaaC34AY.440.000018
ORF1ab/nsp2554K554NaaAaaC33AY.260.000085
ORF1ab/nsp2554K554NaaAaaC13B.1.1770.000013
ORF1ab/nsp2554K554NaaAaaC13B.1.617.20.000004
ORF1ab/nsp2554K554NaaAaaC12B.10.000009
ORF1ab/nsp2554K554NaaAaaC22B.1.3510.000059
ORF1ab/nsp2554K554NaaAaaC22P.1.140.000096
ORF1ab/nsp2554K554NaaAaaC11AY.1020.000027
ORF1ab/nsp2554K554NaaAaaC11AY.1030.000006
ORF1ab/nsp2554K554NaaAaaC11AY.1190.000035
ORF1ab/nsp2554K554NaaAaaC11AY.330.000067
ORF1ab/nsp2554K554NaaAaaC11AY.98.10.000048
ORF1ab/nsp2554K554NaaAaaC11B.1.177.750.001041
ORF1ab/nsp2554K554NaaAaaC11B.1.2430.00007
ORF1ab/nsp2554K554NaaAaaC11B.1.3400.004292
ORF1ab/nsp2554K554NaaAaaC11C.370.000116
ORF1ab/nsp2554K554NaaAaaC11P.10.000016
ORF1ab/nsp2554K554NaaAaaC11P.1.100.000269
ORF1ab/nsp2554K554NaaAaaC11Q.10.000126