CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 550 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2550L550LL730LsynctCctA101792300.02259552453-2455

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2550L550LctCctA23010179All0.000044
ORF1ab/nsp2550L550LctCctA1622104B.1.1.70.000145
ORF1ab/nsp2550L550LctCctA21299B.1.617.20.000008
ORF1ab/nsp2550L550LctCctA11075AY.40.000002
ORF1ab/nsp2550L550LctCctA45868P.10.000709
ORF1ab/nsp2550L550LctCctA2148B.10.000018
ORF1ab/nsp2550L550LctCctA188B.1.10.000018
ORF1ab/nsp2550L550LctCctA286AY.250.000012
ORF1ab/nsp2550L550LctCctA185AY.30.00001
ORF1ab/nsp2550L550LctCctA279AY.430.000009
ORF1ab/nsp2550L550LctCctA260AY.390.000049
ORF1ab/nsp2550L550LctCctA138B.1.1.5190.00004
ORF1ab/nsp2550L550LctCctA110P.1.120.000484
ORF1ab/nsp2550L550LctCctA17B.1.466.20.000391
ORF1ab/nsp2550L550LctCctA16AY.90.000068
ORF1ab/nsp2550L550LctCctA16P.1.140.000048
ORF1ab/nsp2550L550LctCctA13AY.540.000095
ORF1ab/nsp2550L550LctCctA12B.1.1.5280.004808
ORF1ab/nsp2550L550LctCctA12P.1.10.000318
ORF1ab/nsp2550L550LctCctA11B.1.1.1760.000439
ORF1ab/nsp2550L550LctCctA11B.1.2370.004975