CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 550 & Codon = cGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2550L550RL730RnonsyncTccGc515112453-2455

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2550L550RcTccGc5151All0.00001
ORF1ab/nsp2550L550RcTccGc1919AY.9.20.000698
ORF1ab/nsp2550L550RcTccGc1010B.1.1.70.000009
ORF1ab/nsp2550L550RcTccGc44B.1.1.630.001543
ORF1ab/nsp2550L550RcTccGc33AY.40.000005
ORF1ab/nsp2550L550RcTccGc11AY.190.00114
ORF1ab/nsp2550L550RcTccGc11AY.250.000006
ORF1ab/nsp2550L550RcTccGc11AY.30.00001
ORF1ab/nsp2550L550RcTccGc11AY.440.000006
ORF1ab/nsp2550L550RcTccGc11B.1.1.2890.002083
ORF1ab/nsp2550L550RcTccGc11B.1.1.330.000421
ORF1ab/nsp2550L550RcTccGc11B.1.1600.000031
ORF1ab/nsp2550L550RcTccGc11B.1.177.440.000519
ORF1ab/nsp2550L550RcTccGc11B.1.3320.003497
ORF1ab/nsp2550L550RcTccGc11B.1.351.20.000303
ORF1ab/nsp2550L550RcTccGc11B.1.360.000146
ORF1ab/nsp2550L550RcTccGc11B.1.4970.000315
ORF1ab/nsp2550L550RcTccGc11B.1.5820.000491
ORF1ab/nsp2550L550RcTccGc11B.1.617.20.000004
ORF1ab/nsp2550L550RcTccGc11B.1.6210.000089