CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 550 & Codon = cAc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2550L550HL730HnonsyncTccAc383812453-2455

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2550L550HcTccAc3838All0.000007
ORF1ab/nsp2550L550HcTccAc1515B.1.1.70.000013
ORF1ab/nsp2550L550HcTccAc99AA.10.065217
ORF1ab/nsp2550L550HcTccAc22B.1.1600.000062
ORF1ab/nsp2550L550HcTccAc11AY.1020.000027
ORF1ab/nsp2550L550HcTccAc11AY.350.000233
ORF1ab/nsp2550L550HcTccAc11AY.430.000004
ORF1ab/nsp2550L550HcTccAc11AY.440.000006
ORF1ab/nsp2550L550HcTccAc11AY.60.000041
ORF1ab/nsp2550L550HcTccAc11B.1.1.2770.000759
ORF1ab/nsp2550L550HcTccAc11B.1.1.3260.001761
ORF1ab/nsp2550L550HcTccAc11B.1.177.820.000477
ORF1ab/nsp2550L550HcTccAc11B.1.20.000009
ORF1ab/nsp2550L550HcTccAc11B.1.2340.000132
ORF1ab/nsp2550L550HcTccAc11P.10.000016
ORF1ab/nsp2550L550HcTccAc11P.1.140.000048