CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 537 | Y537Y | Y717Y | syn | taC | taT | 13556 | 13556 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537del | Y717del | del | TAC | --- | 83 | 83 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537X | Y717X | nonsyn | taC | taG | 24 | 20 | 0.833333 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537X | Y717X | nonsyn | taC | taA | 24 | 4 | 0.166667 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537F | Y717F | nonsyn | tAc | tTc | 10 | 10 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537C | Y717C | nonsyn | tAc | tGc | 10 | 9 | 0.9 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537C | Y717C | nonsyn | tAC | tGT | 10 | 1 | 0.1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537D | Y717D | nonsyn | Tac | Gac | 9 | 9 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537H | Y717H | nonsyn | Tac | Cac | 8 | 8 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537N | Y717N | nonsyn | Tac | Aac | 4 | 4 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537S | Y717S | nonsyn | TAc | AGc | 4 | 2 | 0.5 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537del1 | Y717del1 | del | TaC | Ma- | 4 | 2 | 0.5 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537del1 | Y717del1 | del | TaC | Ya- | 4 | 1 | 0.25 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537S | Y717S | nonsyn | tAC | tCG | 4 | 1 | 0.25 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537S | Y717S | nonsyn | tAC | tCT | 4 | 1 | 0.25 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537del1 | Y717del1 | del | Tac | -ac | 4 | 1 | 0.25 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537R | Y717R | nonsyn | TAC | CGT | 3 | 2 | 0.666667 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537L | Y717L | nonsyn | TAc | CTc | 3 | 1 | 0.333333 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537R | Y717R | nonsyn | TAC | CGG | 3 | 1 | 0.333333 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537L | Y717L | nonsyn | tAC | tTG | 3 | 1 | 0.333333 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537L | Y717L | nonsyn | TAC | CTT | 3 | 1 | 0.333333 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537W | Y717W | nonsyn | tAC | tGG | 2 | 2 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537P | Y717P | nonsyn | TAC | CCT | 2 | 1 | 0.5 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537P | Y717P | nonsyn | TAC | CCG | 2 | 1 | 0.5 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537Q | Y717Q | nonsyn | TaC | CaA | 1 | 1 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537G | Y717G | nonsyn | TAC | GGT | 1 | 1 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537K | Y717K | nonsyn | TaC | AaA | 1 | 1 | 1 | 2414-2416 |
ORF1ab/nsp2 | 537 | Y537del2 | Y717del2 | del | TAc | --c | 1 | 1 | 1 | 2414-2416 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 13556 | 13556 | All | 0.002593 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5070 | 5070 | B.1 | 0.046439 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1934 | 1934 | B.1.279 | 0.993323 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 992 | 992 | B.1.389 | 0.993988 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 777 | 777 | B.1.177.44 | 0.403217 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 507 | 507 | B.1.474 | 0.963878 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 468 | 468 | B.1.1.7 | 0.000419 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 418 | 418 | B.1.13 | 0.992874 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 398 | 398 | B.1.480 | 0.99005 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 290 | 290 | AZ.4 | 0.973154 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 176 | 176 | B.1.270 | 0.988764 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 171 | 171 | AY.4 | 0.000266 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 165 | 165 | AY.4.2 | 0.003579 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 126 | 126 | B.1.280 | 0.9 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 95 | 95 | AY.25 | 0.000571 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 93 | 93 | B.1.617.2 | 0.00035 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 84 | 84 | B.1.258.17 | 0.008734 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 84 | 84 | B.1.274 | 1 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 83 | 83 | All | 0.000016 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 82 | 82 | B.1.159 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 80 | 80 | B.1.478 | 0.941176 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 79 | 79 | B.1.2 | 0.000696 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 77 | 77 | B.1.273 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 76 | 76 | AY.44 | 0.000463 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 75 | 75 | B.1.622 | 0.974026 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 73 | 73 | B.1.177 | 0.000961 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 70 | 70 | B.1.629 | 0.933333 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 68 | 68 | B.1.37 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 66 | 66 | B.1.282 | 0.985075 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 59 | 59 | B.1.563 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 43 | 43 | B.1.276 | 0.728814 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 42 | 42 | B.1.277 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 37 | 37 | B.1.281 | 0.804348 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 31 | 31 | B.1.1.318 | 0.009354 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 27 | 27 | P.1 | 0.000425 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 26 | 26 | AY.43 | 0.000115 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 25 | 25 | B.1.1 | 0.000454 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 20 | 24 | All | 0.000004 |
ORF1ab/nsp2 | 537 | Y537X | taC | taA | 4 | 24 | All | 0.000001 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 24 | 24 | AY.103 | 0.000149 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 24 | 24 | B.1.479 | 0.923077 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 21 | 21 | B.1.576 | 0.019039 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 19 | 19 | A.21 | 0.052632 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 18 | 18 | B.1.158 | 0.428571 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 16 | 16 | B | 0.002045 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 14 | 14 | AY.42 | 0.000563 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 14 | 14 | B.1.160 | 0.000437 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 12 | 12 | AY.36 | 0.001779 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 12 | 12 | B.1.482 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 12 | 12 | B.1.526 | 0.000282 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 12 | 12 | B.1.544 | 0.072289 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 11 | 11 | B.1.429 | 0.000259 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 10 | 10 | All | 0.000002 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 9 | 10 | All | 0.000002 |
ORF1ab/nsp2 | 537 | Y537C | tAC | tGT | 1 | 10 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 10 | 10 | AY.29 | 0.000158 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 9 | 9 | All | 0.000002 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 9 | 9 | AY.102 | 0.000239 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 9 | 9 | AY.39.1 | 0.000357 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 9 | 9 | AY.98 | 0.000711 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 9 | 9 | B.1.483 | 1 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 8 | 8 | All | 0.000002 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | AY.120.2 | 0.010283 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.1.28 | 0.00249 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.1.397 | 0.018018 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.1.519 | 0.000318 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.160.15 | 0.039604 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.525 | 0.000905 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | AY.46.6 | 0.000505 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | AY.98.1 | 0.000339 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.1.1 | 0.002287 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.128 | 0.004447 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.160.32 | 0.030043 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.475 | 1 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.476 | 0.7 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 7 | 7 | B.1.8 | 0.013807 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 6 | 6 | 0.333333 | |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 6 | 6 | B.1.356 | 0.010363 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 6 | 6 | B.1.361 | 0.007732 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | AY.100 | 0.00023 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | AY.3.1 | 0.000426 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | B.1.1.39 | 0.002548 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | B.1.110.3 | 0.003592 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | B.1.177.32 | 0.006748 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 5 | 5 | B.1.258 | 0.000333 |
ORF1ab/nsp2 | 537 | Y537N | Tac | Aac | 4 | 4 | All | 0.000001 |
ORF1ab/nsp2 | 537 | Y537S | TAc | AGc | 2 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537del1 | TaC | Ma- | 2 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537S | tAC | tCT | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537del1 | Tac | -ac | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537S | tAC | tCG | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537del1 | TaC | Ya- | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 4 | 4 | AY.26 | 0.000113 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 4 | 4 | B.1.210 | 0.008529 |
ORF1ab/nsp2 | 537 | Y537R | TAC | CGT | 2 | 3 | All | 0 |
ORF1ab/nsp2 | 537 | Y537L | TAc | CTc | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 537 | Y537L | tAC | tTG | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 537 | Y537L | TAC | CTT | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 537 | Y537R | TAC | CGG | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.1.312 | 0.005736 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.157 | 0.008955 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.177.21 | 0.000229 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.177.31 | 0.034483 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.232 | 0.001612 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.516 | 0.005871 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.520 | 0.065217 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 3 | 3 | B.1.580 | 0.012195 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp2 | 537 | Y537del1 | TaC | Ma- | 2 | 2 | 0.111111 | |
ORF1ab/nsp2 | 537 | Y537W | tAC | tGG | 2 | 2 | All | 0 |
ORF1ab/nsp2 | 537 | Y537P | TAC | CCT | 1 | 2 | All | 0 |
ORF1ab/nsp2 | 537 | Y537P | TAC | CCG | 1 | 2 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp2 | 537 | Y537S | tAC | tCT | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537R | TAC | CGG | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537P | TAC | CCG | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537P | TAC | CCT | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537S | tAC | tCG | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537R | TAC | CGT | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.147 | 0.001512 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.160.30 | 0.005952 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.177.23 | 0.006472 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.222 | 0.003384 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.399 | 0.003868 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | B.1.424 | 0.016129 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.468 | 0.011429 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.469 | 0.00722 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.1.635 | 0.035088 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | A.25 | 0.018182 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp2 | 537 | Y537del2 | TAc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 537 | Y537K | TaC | AaA | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Q | TaC | CaA | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 537 | Y537G | TAC | GGT | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 537 | Y537N | Tac | Aac | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 537 | Y537del2 | TAc | --c | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537K | TaC | AaA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537N | Tac | Aac | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 537 | Y537S | TAc | AGc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 537 | Y537N | Tac | Aac | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 537 | Y537S | TAc | AGc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp2 | 537 | Y537X | taC | taA | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp2 | 537 | Y537L | TAc | CTc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 537 | Y537W | tAC | tGG | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537C | tAC | tGT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | AZ.6 | 0.008403 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537N | Tac | Aac | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537X | taC | taA | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537del1 | TaC | Ya- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.1.113 | 0.006993 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.1.139 | 0.022727 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.356 | 0.008547 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.466 | 0.008696 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 1 | 1 | B.1.1.52 | 0.012195 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 537 | Y537W | tAC | tGG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 537 | Y537L | tAC | tTG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | B.1.160.29 | 0.004219 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.28 | 0.007407 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.177.89 | 0.02439 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp2 | 537 | Y537del1 | Tac | -ac | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537Q | TaC | CaA | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.214.3 | 0.007143 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.310 | 0.047619 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.316 | 0.111111 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp2 | 537 | Y537D | Tac | Gac | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.556 | 0.007519 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp2 | 537 | Y537F | tAc | tTc | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 537 | Y537H | Tac | Cac | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537L | TAC | CTT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537R | TAC | CGT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537G | TAC | GGT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537X | taC | taA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.23 | 0.002924 |
ORF1ab/nsp2 | 537 | Y537X | taC | taA | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp2 | 537 | Y537X | taC | taG | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp2 | 537 | Y537C | tAc | tGc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp2 | 537 | Y537del | TAC | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp2 | 537 | Y537Y | taC | taT | 1 | 1 | Y.1 | 0.012821 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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