CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 529 & Codon = Ctt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2529F529LF709LnonsynTttCtt2041750.8578432390-2392

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2529F529LTttCtt175204All0.000033
ORF1ab/nsp2529F529LTttCtt2727AY.30.000269
ORF1ab/nsp2529F529LTttCtt1320B.1.1.70.000012
ORF1ab/nsp2529F529LTttCtt1415AY.40.000022
ORF1ab/nsp2529F529LTttCtt1212B.1.258.140.011765
ORF1ab/nsp2529F529LTttCtt711B.1.20.000062
ORF1ab/nsp2529F529LTttCtt77AY.200.000272
ORF1ab/nsp2529F529LTttCtt77B.10.000064
ORF1ab/nsp2529F529LTttCtt77B.1.4290.000165
ORF1ab/nsp2529F529LTttCtt77P.10.00011
ORF1ab/nsp2529F529LTttCtt66AY.1030.000037
ORF1ab/nsp2529F529LTttCtt56B.1.617.20.000019
ORF1ab/nsp2529F529LTttCtt55AY.430.000022
ORF1ab/nsp2529F529LTttCtt55B.1.1.4340.001743
ORF1ab/nsp2529F529LTttCtt55B.1.2580.000333
ORF1ab/nsp2529F529LTttCtt44AY.3.10.000341
ORF1ab/nsp2529F529LTttCtt44B.1.10.000073
ORF1ab/nsp2529F529LTttCtt33AY.440.000018
ORF1ab/nsp2529F529LTttCtt33B.1.5260.000071
ORF1ab/nsp2529F529LTttCtt22AY.120.000632
ORF1ab/nsp2529F529LTttCtt22AY.250.000012
ORF1ab/nsp2529F529LTttCtt22AY.390.000049
ORF1ab/nsp2529F529LTttCtt22B.1.6210.000177
ORF1ab/nsp2529F529LTttCtt22P.1.140.000096
ORF1ab/nsp2529F529LTttCtt11A.2.50.000499
ORF1ab/nsp2529F529LTttCtt11AY.1100.000113
ORF1ab/nsp2529F529LTttCtt11AY.1170.000085
ORF1ab/nsp2529F529LTttCtt11AY.230.00007
ORF1ab/nsp2529F529LTttCtt11AY.260.000028
ORF1ab/nsp2529F529LTttCtt11AY.330.000067
ORF1ab/nsp2529F529LTttCtt11AY.450.000122
ORF1ab/nsp2529F529LTttCtt11AY.46.10.001027
ORF1ab/nsp2529F529LTttCtt11AY.50.000021
ORF1ab/nsp2529F529LTttCtt11AY.5.40.000277
ORF1ab/nsp2529F529LTttCtt11AY.60.000041
ORF1ab/nsp2529F529LTttCtt11AY.710.000475
ORF1ab/nsp2529F529LTttCtt11AY.730.000665
ORF1ab/nsp2529F529LTttCtt11AY.9.20.000037
ORF1ab/nsp2529F529LTttCtt11B0.000128
ORF1ab/nsp2529F529LTttCtt11B.1.1.330.000421
ORF1ab/nsp2529F529LTttCtt11B.1.1.3970.002252
ORF1ab/nsp2529F529LTttCtt11B.1.214.20.0006
ORF1ab/nsp2529F529LTttCtt11B.1.36.170.000494
ORF1ab/nsp2529F529LTttCtt11B.1.4480.002625
ORF1ab/nsp2529F529LTttCtt11B.1.5030.002488
ORF1ab/nsp2529F529LTttCtt11B.1.5750.000303
ORF1ab/nsp2529F529LTttCtt11B.1.6280.000352
ORF1ab/nsp2529F529LTttCtt11B.3.10.001658