CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 529 & Codon = -tt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2529F529del1F709del1delTtt-tt12110.9166672390-2392

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2529F529del1Ttt-tt1112All0.000002
ORF1ab/nsp2529F529del1Ttt-tt23B.1.20.000018
ORF1ab/nsp2529F529del1Ttt-tt11AY.250.000006
ORF1ab/nsp2529F529del1Ttt-tt11AY.40.000002
ORF1ab/nsp2529F529del1Ttt-tt11AY.440.000006
ORF1ab/nsp2529F529del1Ttt-tt11AY.90.000068
ORF1ab/nsp2529F529del1Ttt-tt11B.10.000009
ORF1ab/nsp2529F529del1Ttt-tt11B.1.10.000018
ORF1ab/nsp2529F529del1Ttt-tt11B.1.1.120.007463
ORF1ab/nsp2529F529del1Ttt-tt11B.1.1.70.000001
ORF1ab/nsp2529F529del1Ttt-tt11D.20.000075