CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 509 & Codon = tTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2509C509FC689FnonsyntGttTt343412330-2332

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2509C509FtGttTt3434All0.000007
ORF1ab/nsp2509C509FtGttTt44AY.4.40.001637
ORF1ab/nsp2509C509FtGttTt44B.1.617.20.000015
ORF1ab/nsp2509C509FtGttTt33AY.440.000018
ORF1ab/nsp2509C509FtGttTt22AY.250.000012
ORF1ab/nsp2509C509FtGttTt22B.10.000018
ORF1ab/nsp2509C509FtGttTt22B.1.20.000018
ORF1ab/nsp2509C509FtGttTt11A.10.000282
ORF1ab/nsp2509C509FtGttTt11A.20.000662
ORF1ab/nsp2509C509FtGttTt11AY.1190.000035
ORF1ab/nsp2509C509FtGttTt11AY.40.000002
ORF1ab/nsp2509C509FtGttTt11AY.430.000004
ORF1ab/nsp2509C509FtGttTt11AY.50.000021
ORF1ab/nsp2509C509FtGttTt11AY.610.000105
ORF1ab/nsp2509C509FtGttTt11AY.9.20.000037
ORF1ab/nsp2509C509FtGttTt11B.1.10.000018
ORF1ab/nsp2509C509FtGttTt11B.1.1.70.000001
ORF1ab/nsp2509C509FtGttTt11B.1.1770.000013
ORF1ab/nsp2509C509FtGttTt11B.1.2210.000071
ORF1ab/nsp2509C509FtGttTt11B.1.3510.00003
ORF1ab/nsp2509C509FtGttTt11B.1.5250.000113
ORF1ab/nsp2509C509FtGttTt11C.370.000116
ORF1ab/nsp2509C509FtGttTt11D.20.000075
ORF1ab/nsp2509C509FtGttTt11P.10.000016