CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 499 & Codon = ttC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2499F499FF679FsynttTttC11211212300-2302

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2499F499FttTttC112112All0.000021
ORF1ab/nsp2499F499FttTttC7777AY.1180.004824
ORF1ab/nsp2499F499FttTttC77B.1.1.70.000006
ORF1ab/nsp2499F499FttTttC44AY.40.000006
ORF1ab/nsp2499F499FttTttC33AY.420.000121
ORF1ab/nsp2499F499FttTttC33AY.430.000013
ORF1ab/nsp2499F499FttTttC22AY.1200.000074
ORF1ab/nsp2499F499FttTttC22AY.290.000032
ORF1ab/nsp2499F499FttTttC22AY.440.000012
ORF1ab/nsp2499F499FttTttC22AY.60.000082
ORF1ab/nsp2499F499FttTttC22B.1.617.20.000008
ORF1ab/nsp2499F499FttTttC11AY.1020.000027
ORF1ab/nsp2499F499FttTttC11AY.230.00007
ORF1ab/nsp2499F499FttTttC11AY.30.00001
ORF1ab/nsp2499F499FttTttC11AY.46.60.000072
ORF1ab/nsp2499F499FttTttC11B.1.1.1330.008475
ORF1ab/nsp2499F499FttTttC11B.1.2580.000067
ORF1ab/nsp2499F499FttTttC11B.1.36.290.000517
ORF1ab/nsp2499F499FttTttC11B.1.438.10.000107