CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 499 & Codon = Ctt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2499F499LF679LnonsynTttCtt4634100.8855292300-2302

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2499F499LTttCtt410463All0.000078
ORF1ab/nsp2499F499LTttCtt134136B.10.001227
ORF1ab/nsp2499F499LTttCtt6666AY.46.40.010857
ORF1ab/nsp2499F499LTttCtt5959B.1.5631
ORF1ab/nsp2499F499LTttCtt1341B.1.617.20.000049
ORF1ab/nsp2499F499LTttCtt2323AY.40.000036
ORF1ab/nsp2499F499LTttCtt2222AY.1020.000583
ORF1ab/nsp2499F499LTttCtt1111AY.30.000109
ORF1ab/nsp2499F499LTttCtt810B.1.20.00007
ORF1ab/nsp2499F499LTttCtt69AY.440.000037
ORF1ab/nsp2499F499LTttCtt77AY.98.10.000339
ORF1ab/nsp2499F499LTttCtt67B.1.1.70.000005
ORF1ab/nsp2499F499LTttCtt66B.1.3620.009245
ORF1ab/nsp2499F499LTttCtt55AY.430.000022
ORF1ab/nsp2499F499LTttCtt35AY.9.20.00011
ORF1ab/nsp2499F499LTttCtt55P.10.000079
ORF1ab/nsp2499F499LTttCtt34B.1.10.000054
ORF1ab/nsp2499F499LTttCtt33AY.1030.000019
ORF1ab/nsp2499F499LTttCtt33AY.260.000085
ORF1ab/nsp2499F499LTttCtt33AY.750.000168
ORF1ab/nsp2499F499LTttCtt22AY.230.000139
ORF1ab/nsp2499F499LTttCtt22B.1.1.2160.001781
ORF1ab/nsp2499F499LTttCtt12B.1.258.170.000104
ORF1ab/nsp2499F499LTttCtt12B.1.4270.00005
ORF1ab/nsp2499F499LTttCtt22D.20.00015
ORF1ab/nsp2499F499LTttCtt11A.2.40.003367
ORF1ab/nsp2499F499LTttCtt11AY.1200.000037
ORF1ab/nsp2499F499LTttCtt11AY.320.000532
ORF1ab/nsp2499F499LTttCtt11AY.330.000067
ORF1ab/nsp2499F499LTttCtt11AY.340.000097
ORF1ab/nsp2499F499LTttCtt11AY.34.10.00051
ORF1ab/nsp2499F499LTttCtt11AY.420.00004
ORF1ab/nsp2499F499LTttCtt11B.1.1.1980.001468
ORF1ab/nsp2499F499LTttCtt11B.1.1.390.00051
ORF1ab/nsp2499F499LTttCtt11B.1.110.30.000718
ORF1ab/nsp2499F499LTttCtt11B.1.177.90.001332
ORF1ab/nsp2499F499LTttCtt11B.1.4040.001302
ORF1ab/nsp2499F499LTttCtt11B.1.438.10.000107
ORF1ab/nsp2499F499LTttCtt11B.1.5200.021739
ORF1ab/nsp2499F499LTttCtt11B.1.6200.000946
ORF1ab/nsp2499F499LTttCtt11C.230.005814