CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 499 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2499F499delF679deldelTTT---747412300-2302

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2499F499delTTT---7474All0.000014
ORF1ab/nsp2499F499delTTT---2121B.1.1.70.000019
ORF1ab/nsp2499F499delTTT---660.333333
ORF1ab/nsp2499F499delTTT---55B.10.000046
ORF1ab/nsp2499F499delTTT---44AY.430.000018
ORF1ab/nsp2499F499delTTT---44B.1.617.20.000015
ORF1ab/nsp2499F499delTTT---33B.1.1.330.001263
ORF1ab/nsp2499F499delTTT---22AY.990.002099
ORF1ab/nsp2499F499delTTT---22B.1.10.000036
ORF1ab/nsp2499F499delTTT---22B.1.1.3480.001592
ORF1ab/nsp2499F499delTTT---22B.1.4240.016129
ORF1ab/nsp2499F499delTTT---22B.1.4290.000047
ORF1ab/nsp2499F499delTTT---22N.60.014184
ORF1ab/nsp2499F499delTTT---11AY.1080.001103
ORF1ab/nsp2499F499delTTT---11AY.250.000006
ORF1ab/nsp2499F499delTTT---11AY.29.10.000221
ORF1ab/nsp2499F499delTTT---11AY.40.000002
ORF1ab/nsp2499F499delTTT---11AY.440.000006
ORF1ab/nsp2499F499delTTT---11AY.670.000464
ORF1ab/nsp2499F499delTTT---11AY.750.000056
ORF1ab/nsp2499F499delTTT---11AY.840.000437
ORF1ab/nsp2499F499delTTT---11AY.98.10.000048
ORF1ab/nsp2499F499delTTT---11B.1.1.4160.000905
ORF1ab/nsp2499F499delTTT---11B.1.1.5230.001563
ORF1ab/nsp2499F499delTTT---11B.1.1770.000013
ORF1ab/nsp2499F499delTTT---11B.1.1790.003759
ORF1ab/nsp2499F499delTTT---11B.1.416.10.001563
ORF1ab/nsp2499F499delTTT---11B.1.5610.000397
ORF1ab/nsp2499F499delTTT---11B.340.013699
ORF1ab/nsp2499F499delTTT---11B.570.015152
ORF1ab/nsp2499F499delTTT---11P.10.000016
ORF1ab/nsp2499F499delTTT---11P.20.000187