CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 485 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2485V485VV665VsyngtCgtT4844410.9111572258-2260

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2485V485VgtCgtT441484All0.000084
ORF1ab/nsp2485V485VgtCgtT106110AY.40.000165
ORF1ab/nsp2485V485VgtCgtT4448B.1.1.70.000039
ORF1ab/nsp2485V485VgtCgtT2730B.1.617.20.000102
ORF1ab/nsp2485V485VgtCgtT1722AY.1030.000106
ORF1ab/nsp2485V485VgtCgtT2121AY.9.10.001758
ORF1ab/nsp2485V485VgtCgtT2020AY.7.10.002254
ORF1ab/nsp2485V485VgtCgtT1616AY.430.000071
ORF1ab/nsp2485V485VgtCgtT1015B.1.20.000088
ORF1ab/nsp2485V485VgtCgtT1014AY.250.00006
ORF1ab/nsp2485V485VgtCgtT1212B.1.1.460.052402
ORF1ab/nsp2485V485VgtCgtT1111B.1.177.210.000841
ORF1ab/nsp2485V485VgtCgtT69AY.30.00006
ORF1ab/nsp2485V485VgtCgtT88B.1.10.000145
ORF1ab/nsp2485V485VgtCgtT67AY.440.000037
ORF1ab/nsp2485V485VgtCgtT77B.1.1.2840.000752
ORF1ab/nsp2485V485VgtCgtT66AY.3.10.000512
ORF1ab/nsp2485V485VgtCgtT26B.10.000018
ORF1ab/nsp2485V485VgtCgtT56B.1.4270.000252
ORF1ab/nsp2485V485VgtCgtT55AY.330.000334
ORF1ab/nsp2485V485VgtCgtT55AY.9.20.000184
ORF1ab/nsp2485V485VgtCgtT55B.1.1770.000066
ORF1ab/nsp2485V485VgtCgtT55B.1.5260.000118
ORF1ab/nsp2485V485VgtCgtT44AY.1020.000106
ORF1ab/nsp2485V485VgtCgtT44AY.50.000083
ORF1ab/nsp2485V485VgtCgtT44B.1.2580.000266
ORF1ab/nsp2485V485VgtCgtT44B.1.3510.000119
ORF1ab/nsp2485V485VgtCgtT44B.1.360.000584
ORF1ab/nsp2485V485VgtCgtT33AY.10.001187
ORF1ab/nsp2485V485VgtCgtT33AY.1000.000138
ORF1ab/nsp2485V485VgtCgtT33AY.160.001139
ORF1ab/nsp2485V485VgtCgtT33AY.290.000047
ORF1ab/nsp2485V485VgtCgtT33AY.390.000074
ORF1ab/nsp2485V485VgtCgtT33B.1.177.440.001557
ORF1ab/nsp2485V485VgtCgtT33B.1.6210.000266
ORF1ab/nsp2485V485VgtCgtT12A0.000387
ORF1ab/nsp2485V485VgtCgtT22AY.1010.000981
ORF1ab/nsp2485V485VgtCgtT22AY.1080.002205
ORF1ab/nsp2485V485VgtCgtT22AY.1190.000071
ORF1ab/nsp2485V485VgtCgtT12AY.260.000028
ORF1ab/nsp2485V485VgtCgtT22AY.460.000208
ORF1ab/nsp2485V485VgtCgtT12B.1.1600.000031
ORF1ab/nsp2485V485VgtCgtT22B.1.177.830.002963
ORF1ab/nsp2485V485VgtCgtT22B.1.36.180.00084
ORF1ab/nsp2485V485VgtCgtT12B.1.4290.000024
ORF1ab/nsp2485V485VgtCgtT22B.1.5880.00182
ORF1ab/nsp2485V485VgtCgtT22P.10.000032
ORF1ab/nsp2485V485VgtCgtT11AE.10.011364
ORF1ab/nsp2485V485VgtCgtT11AY.1040.001984
ORF1ab/nsp2485V485VgtCgtT11AY.200.000039
ORF1ab/nsp2485V485VgtCgtT11AY.270.000065
ORF1ab/nsp2485V485VgtCgtT11AY.29.10.000221
ORF1ab/nsp2485V485VgtCgtT11AY.420.00004
ORF1ab/nsp2485V485VgtCgtT11AY.450.000122
ORF1ab/nsp2485V485VgtCgtT11AY.610.000105
ORF1ab/nsp2485V485VgtCgtT11AY.980.000079
ORF1ab/nsp2485V485VgtCgtT11B0.000128
ORF1ab/nsp2485V485VgtCgtT11B.1.1.2360.006897
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3060.000438
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3110.000358
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3690.000446
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3890.006061
ORF1ab/nsp2485V485VgtCgtT11B.1.1100.004525
ORF1ab/nsp2485V485VgtCgtT11B.1.1280.000635
ORF1ab/nsp2485V485VgtCgtT11B.1.160.160.000929
ORF1ab/nsp2485V485VgtCgtT11B.1.177.320.00135
ORF1ab/nsp2485V485VgtCgtT11B.1.177.450.000381
ORF1ab/nsp2485V485VgtCgtT11B.1.36.170.000494
ORF1ab/nsp2485V485VgtCgtT11B.1.5950.000261
ORF1ab/nsp2485V485VgtCgtT11B.1.617.10.000129
ORF1ab/nsp2485V485VgtCgtT11B.1.780.008547
ORF1ab/nsp2485V485VgtCgtT11P.1.150.000232
ORF1ab/nsp2485V485VgtCgtT11R.10.00009