CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 485

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2485V485IV665InonsynGtcAtc27644276420.9999282258-2260
ORF1ab/nsp2485V485IV665InonsynGtCAtT2764420.00007234842258-2260
ORF1ab/nsp2485V485VV665VsyngtCgtT4844410.9111572258-2260
ORF1ab/nsp2485V485VV665VsyngtCgtA484380.07851242258-2260
ORF1ab/nsp2485V485VV665VsyngtCgtG48450.01033062258-2260
ORF1ab/nsp2485V485AV665AnonsyngTcgCc3383370.9970412258-2260
ORF1ab/nsp2485V485AV665AnonsyngTCgCT33810.002958582258-2260
ORF1ab/nsp2485V485FV665FnonsynGtcTtc1131120.991152258-2260
ORF1ab/nsp2485V485FV665FnonsynGtCTtT11310.008849562258-2260
ORF1ab/nsp2485V485GV665GnonsyngTcgGc929212258-2260
ORF1ab/nsp2485V485delV665deldelGTC---838312258-2260
ORF1ab/nsp2485V485LV665LnonsynGtcCtc14120.8571432258-2260
ORF1ab/nsp2485V485LV665LnonsynGtCCtG1420.1428572258-2260
ORF1ab/nsp2485V485NV665NnonsynGTcAAc3312258-2260
ORF1ab/nsp2485V485PV665PnonsynGTcCCc320.6666672258-2260
ORF1ab/nsp2485V485PV665PnonsynGTCCCA310.3333332258-2260
ORF1ab/nsp2485V485DV665DnonsyngTcgAc2212258-2260
ORF1ab/nsp2485V485del1V665del1delgtCgt-2212258-2260
ORF1ab/nsp2485V485del2V665del2delgTCg--1112258-2260
ORF1ab/nsp2485V485RV665RnonsynGTcCGc1112258-2260

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2485V485IGtcAtc2764227644All0.005287
ORF1ab/nsp2485V485IGtCAtT227644All0
ORF1ab/nsp2485V485IGtcAtc1954619548AY.420.786338
ORF1ab/nsp2485V485IGtCAtT219548AY.420.00008
ORF1ab/nsp2485V485IGtcAtc71807180B.1.2340.947355
ORF1ab/nsp2485V485VgtCgtT441484All0.000084
ORF1ab/nsp2485V485VgtCgtA38484All0.000007
ORF1ab/nsp2485V485VgtCgtG5484All0.000001
ORF1ab/nsp2485V485AgTcgCc337338All0.000064
ORF1ab/nsp2485V485AgTCgCT1338All0
ORF1ab/nsp2485V485IGtcAtc274274B.10.00251
ORF1ab/nsp2485V485AgTcgCc150150AY.430.000665
ORF1ab/nsp2485V485IGtcAtc122122B.1.20.001074
ORF1ab/nsp2485V485FGtcTtc112113All0.000021
ORF1ab/nsp2485V485FGtCTtT1113All0
ORF1ab/nsp2485V485VgtCgtT106110AY.40.000165
ORF1ab/nsp2485V485VgtCgtA4110AY.40.000006
ORF1ab/nsp2485V485GgTcgGc9292All0.000018
ORF1ab/nsp2485V485delGTC---8383All0.000016
ORF1ab/nsp2485V485GgTcgGc6464AY.4.2.10.009535
ORF1ab/nsp2485V485VgtCgtT4448B.1.1.70.000039
ORF1ab/nsp2485V485VgtCgtA448B.1.1.70.000004
ORF1ab/nsp2485V485AgTcgCc4444B.1.3510.001308
ORF1ab/nsp2485V485IGtcAtc4343AY.390.001063
ORF1ab/nsp2485V485IGtcAtc4343B.1.5960.003747
ORF1ab/nsp2485V485IGtcAtc3838B.1.617.20.000143
ORF1ab/nsp2485V485IGtcAtc3737B.1.1.70.000033
ORF1ab/nsp2485V485IGtcAtc3636AY.430.000159
ORF1ab/nsp2485V485VgtCgtT2730B.1.617.20.000102
ORF1ab/nsp2485V485VgtCgtA330B.1.617.20.000011
ORF1ab/nsp2485V485AgTcgCc2828B.1.1.70.000025
ORF1ab/nsp2485V485IGtcAtc2323AY.1030.000143
ORF1ab/nsp2485V485VgtCgtT1722AY.1030.000106
ORF1ab/nsp2485V485VgtCgtA422AY.1030.000025
ORF1ab/nsp2485V485VgtCgtG122AY.1030.000006
ORF1ab/nsp2485V485IGtcAtc2222AY.440.000134
ORF1ab/nsp2485V485VgtCgtT2121AY.9.10.001758
ORF1ab/nsp2485V485AgTcgCc2121C.370.002437
ORF1ab/nsp2485V485VgtCgtT2020AY.7.10.002254
ORF1ab/nsp2485V485delGTC---1919B.1.1.70.000017
ORF1ab/nsp2485V485VgtCgtT1616AY.430.000071
ORF1ab/nsp2485V485delGTC---1616B.1.36.70.064
ORF1ab/nsp2485V485VgtCgtT1015B.1.20.000088
ORF1ab/nsp2485V485VgtCgtA515B.1.20.000044
ORF1ab/nsp2485V485LGtcCtc1214All0.000002
ORF1ab/nsp2485V485LGtCCtG214All0
ORF1ab/nsp2485V485VgtCgtT1014AY.250.00006
ORF1ab/nsp2485V485VgtCgtA414AY.250.000024
ORF1ab/nsp2485V485IGtcAtc1414AY.40.000022
ORF1ab/nsp2485V485FGtcTtc1414AY.40.000022
ORF1ab/nsp2485V485FGtcTtc1414AY.4.20.000304
ORF1ab/nsp2485V485IGtcAtc1313AY.23.10.005426
ORF1ab/nsp2485V485IGtcAtc1313B.1.10.000236
ORF1ab/nsp2485V485IGtcAtc1212AY.30.000119
ORF1ab/nsp2485V485AgTcgCc1212AY.40.000019
ORF1ab/nsp2485V485VgtCgtT1212B.1.1.460.052402
ORF1ab/nsp2485V485VgtCgtT1111B.1.177.210.000841
ORF1ab/nsp2485V485GgTcgGc1010AY.470.000311
ORF1ab/nsp2485V485AgTcgCc1010B.1.1.5190.000397
ORF1ab/nsp2485V485IGtcAtc99AY.1020.000239
ORF1ab/nsp2485V485FGtcTtc99AY.1030.000056
ORF1ab/nsp2485V485FGtcTtc99AY.250.000054
ORF1ab/nsp2485V485VgtCgtT69AY.30.00006
ORF1ab/nsp2485V485VgtCgtA39AY.30.00003
ORF1ab/nsp2485V485VgtCgtT88B.1.10.000145
ORF1ab/nsp2485V485IGtcAtc88B.1.2210.000568
ORF1ab/nsp2485V485IGtcAtc88B.1.2400.001725
ORF1ab/nsp2485V485IGtcAtc88B.1.2430.000557
ORF1ab/nsp2485V485IGtcAtc77AY.4.20.000152
ORF1ab/nsp2485V485FGtcTtc77AY.430.000031
ORF1ab/nsp2485V485VgtCgtT67AY.440.000037
ORF1ab/nsp2485V485VgtCgtG17AY.440.000006
ORF1ab/nsp2485V485AgTcgCc77AY.9.20.000257
ORF1ab/nsp2485V485delGTC---77B.10.000064
ORF1ab/nsp2485V485VgtCgtT77B.1.1.2840.000752
ORF1ab/nsp2485V485AgTcgCc67B.1.617.20.000023
ORF1ab/nsp2485V485AgTCgCT17B.1.617.20.000004
ORF1ab/nsp2485V485FGtcTtc77C.370.000812
ORF1ab/nsp2485V485IGtcAtc66AY.260.00017
ORF1ab/nsp2485V485VgtCgtT66AY.3.10.000512
ORF1ab/nsp2485V485VgtCgtA26B.10.000018
ORF1ab/nsp2485V485VgtCgtG26B.10.000018
ORF1ab/nsp2485V485VgtCgtT26B.10.000018
ORF1ab/nsp2485V485IGtcAtc66B.1.3490.004289
ORF1ab/nsp2485V485VgtCgtT56B.1.4270.000252
ORF1ab/nsp2485V485VgtCgtA16B.1.4270.00005
ORF1ab/nsp2485V485IGtcAtc55AY.200.000194
ORF1ab/nsp2485V485IGtcAtc55AY.3.10.000426
ORF1ab/nsp2485V485VgtCgtT55AY.330.000334
ORF1ab/nsp2485V485IGtcAtc55AY.460.00052
ORF1ab/nsp2485V485VgtCgtT55AY.9.20.000184
ORF1ab/nsp2485V485IGtcAtc55AY.99.20.000461
ORF1ab/nsp2485V485AgTcgCc55B.1.10.000091
ORF1ab/nsp2485V485VgtCgtT55B.1.1770.000066
ORF1ab/nsp2485V485IGtcAtc55B.1.3960.003529
ORF1ab/nsp2485V485VgtCgtT55B.1.5260.000118
ORF1ab/nsp2485V485IGtcAtc55B.1.5610.001985
ORF1ab/nsp2485V485VgtCgtT44AY.1020.000106
ORF1ab/nsp2485V485AgTcgCc44AY.250.000024
ORF1ab/nsp2485V485GgTcgGc44AY.250.000024
ORF1ab/nsp2485V485IGtcAtc44AY.250.000024
ORF1ab/nsp2485V485AgTcgCc44AY.440.000024
ORF1ab/nsp2485V485FGtcTtc44AY.460.000416
ORF1ab/nsp2485V485VgtCgtT44AY.50.000083
ORF1ab/nsp2485V485IGtcAtc44AY.530.00115
ORF1ab/nsp2485V485AgTcgCc44AY.750.000224
ORF1ab/nsp2485V485IGtcAtc44AY.98.10.000194
ORF1ab/nsp2485V485IGtcAtc44B0.000511
ORF1ab/nsp2485V485delGTC---44B.1.10.000073
ORF1ab/nsp2485V485VgtCgtT44B.1.2580.000266
ORF1ab/nsp2485V485IGtcAtc44B.1.3110.001098
ORF1ab/nsp2485V485VgtCgtT44B.1.3510.000119
ORF1ab/nsp2485V485VgtCgtT44B.1.360.000584
ORF1ab/nsp2485V485IGtcAtc44B.1.5950.001044
ORF1ab/nsp2485V485delGTC---44B.1.617.20.000015
ORF1ab/nsp2485V485FGtcTtc44B.1.617.20.000015
ORF1ab/nsp2485V485AgTcgCc44Q.30.00058
ORF1ab/nsp2485V485NGTcAAc33All0.000001
ORF1ab/nsp2485V485PGTcCCc23All0
ORF1ab/nsp2485V485PGTCCCA13All0
ORF1ab/nsp2485V485VgtCgtT33AY.10.001187
ORF1ab/nsp2485V485VgtCgtT33AY.1000.000138
ORF1ab/nsp2485V485IGtcAtc33AY.1170.000254
ORF1ab/nsp2485V485VgtCgtT33AY.160.001139
ORF1ab/nsp2485V485FGtcTtc33AY.290.000047
ORF1ab/nsp2485V485IGtcAtc33AY.290.000047
ORF1ab/nsp2485V485VgtCgtT33AY.290.000047
ORF1ab/nsp2485V485FGtcTtc33AY.30.00003
ORF1ab/nsp2485V485VgtCgtT33AY.390.000074
ORF1ab/nsp2485V485GgTcgGc33AY.40.000005
ORF1ab/nsp2485V485IGtcAtc33AY.630.001161
ORF1ab/nsp2485V485IGtcAtc33AY.750.000168
ORF1ab/nsp2485V485IGtcAtc33AY.9.20.00011
ORF1ab/nsp2485V485NGTcAAc33B.10.000027
ORF1ab/nsp2485V485AgTcgCc33B.10.000027
ORF1ab/nsp2485V485LGtCCtG23B.10.000018
ORF1ab/nsp2485V485LGtcCtc13B.10.000009
ORF1ab/nsp2485V485delGTC---33B.1.1.330.001263
ORF1ab/nsp2485V485FGtcTtc33B.1.1.70.000003
ORF1ab/nsp2485V485IGtcAtc33B.1.1770.00004
ORF1ab/nsp2485V485AgTcgCc33B.1.1770.00004
ORF1ab/nsp2485V485VgtCgtT33B.1.177.440.001557
ORF1ab/nsp2485V485IGtcAtc33B.1.3510.000089
ORF1ab/nsp2485V485IGtcAtc33B.1.3690.000856
ORF1ab/nsp2485V485LGtcCtc33B.1.3980.008929
ORF1ab/nsp2485V485IGtcAtc33B.1.4030.009804
ORF1ab/nsp2485V485IGtcAtc33B.1.4270.000151
ORF1ab/nsp2485V485IGtcAtc33B.1.5800.012195
ORF1ab/nsp2485V485GgTcgGc33B.1.617.20.000011
ORF1ab/nsp2485V485VgtCgtT33B.1.6210.000266
ORF1ab/nsp2485V485VgtCgtA12A0.000387
ORF1ab/nsp2485V485VgtCgtT12A0.000387
ORF1ab/nsp2485V485DgTcgAc22All0
ORF1ab/nsp2485V485del1gtCgt-22All0
ORF1ab/nsp2485V485VgtCgtT22AY.1010.000981
ORF1ab/nsp2485V485VgtCgtT22AY.1080.002205
ORF1ab/nsp2485V485IGtcAtc22AY.1140.000462
ORF1ab/nsp2485V485VgtCgtT22AY.1190.000071
ORF1ab/nsp2485V485IGtcAtc22AY.230.000139
ORF1ab/nsp2485V485VgtCgtA12AY.260.000028
ORF1ab/nsp2485V485VgtCgtT12AY.260.000028
ORF1ab/nsp2485V485LGtcCtc22AY.30.00002
ORF1ab/nsp2485V485IGtcAtc22AY.34.10.00102
ORF1ab/nsp2485V485delGTC---22AY.350.000466
ORF1ab/nsp2485V485AgTcgCc22AY.390.000049
ORF1ab/nsp2485V485FGtcTtc22AY.440.000012
ORF1ab/nsp2485V485VgtCgtT22AY.460.000208
ORF1ab/nsp2485V485IGtcAtc22AY.46.60.000144
ORF1ab/nsp2485V485IGtcAtc22AY.50.000041
ORF1ab/nsp2485V485IGtcAtc22AY.590.001059
ORF1ab/nsp2485V485IGtcAtc22AY.730.001331
ORF1ab/nsp2485V485VgtCgtA22AY.750.000112
ORF1ab/nsp2485V485IGtcAtc22AY.90.000135
ORF1ab/nsp2485V485IGtcAtc22AY.9.10.000167
ORF1ab/nsp2485V485IGtcAtc22AY.920.000575
ORF1ab/nsp2485V485IGtcAtc22AY.980.000158
ORF1ab/nsp2485V485delGTC---22AZ.20.001642
ORF1ab/nsp2485V485FGtcTtc22B.10.000018
ORF1ab/nsp2485V485FGtcTtc22B.1.1.2070.002364
ORF1ab/nsp2485V485AgTcgCc22B.1.1.3170.000823
ORF1ab/nsp2485V485delGTC---22B.1.1.3480.001592
ORF1ab/nsp2485V485IGtcAtc22B.1.1.4340.000697
ORF1ab/nsp2485V485FGtcTtc22B.1.1.5190.000079
ORF1ab/nsp2485V485PGTcCCc22B.1.1.70.000002
ORF1ab/nsp2485V485VgtCgtA12B.1.1600.000031
ORF1ab/nsp2485V485VgtCgtT12B.1.1600.000031
ORF1ab/nsp2485V485IGtcAtc22B.1.177.730.001133
ORF1ab/nsp2485V485VgtCgtT22B.1.177.830.002963
ORF1ab/nsp2485V485FGtcTtc22B.1.20.000018
ORF1ab/nsp2485V485AgTcgCc22B.1.20.000018
ORF1ab/nsp2485V485IGtcAtc22B.1.2060.001631
ORF1ab/nsp2485V485AgTcgCc22B.1.351.20.000605
ORF1ab/nsp2485V485IGtcAtc22B.1.36.100.009569
ORF1ab/nsp2485V485VgtCgtT22B.1.36.180.00084
ORF1ab/nsp2485V485delGTC---22B.1.4240.016129
ORF1ab/nsp2485V485delGTC---22B.1.4290.000047
ORF1ab/nsp2485V485IGtcAtc22B.1.4290.000047
ORF1ab/nsp2485V485VgtCgtT12B.1.4290.000024
ORF1ab/nsp2485V485VgtCgtG12B.1.4290.000024
ORF1ab/nsp2485V485IGtcAtc22B.1.5820.000981
ORF1ab/nsp2485V485VgtCgtT22B.1.5880.00182
ORF1ab/nsp2485V485IGtcAtc22B.1.5900.009091
ORF1ab/nsp2485V485del1gtCgt-22B.1.6270.00404
ORF1ab/nsp2485V485FGtcTtc22D.20.00015
ORF1ab/nsp2485V485delGTC---22N.60.014184
ORF1ab/nsp2485V485VgtCgtT22P.10.000032
ORF1ab/nsp2485V485IGtcAtc110.055556
ORF1ab/nsp2485V485IGtcAtc11A0.000387
ORF1ab/nsp2485V485delGTC---11A0.000387
ORF1ab/nsp2485V485IGtcAtc11A.20.000662
ORF1ab/nsp2485V485FGtcTtc11A.2.50.000499
ORF1ab/nsp2485V485AgTcgCc11AD.20.000219
ORF1ab/nsp2485V485VgtCgtT11AE.10.011364
ORF1ab/nsp2485V485del2gTCg--11All0
ORF1ab/nsp2485V485RGTcCGc11All0
ORF1ab/nsp2485V485PGTCCCA11AY.1030.000006
ORF1ab/nsp2485V485VgtCgtT11AY.1040.001984
ORF1ab/nsp2485V485IGtcAtc11AY.1080.001103
ORF1ab/nsp2485V485delGTC---11AY.1080.001103
ORF1ab/nsp2485V485FGtcTtc11AY.1110.000183
ORF1ab/nsp2485V485AgTcgCc11AY.1130.000142
ORF1ab/nsp2485V485FGtcTtc11AY.1130.000142
ORF1ab/nsp2485V485VgtCgtA11AY.116.10.000311
ORF1ab/nsp2485V485IGtcAtc11AY.116.10.000311
ORF1ab/nsp2485V485IGtcAtc11AY.1180.000063
ORF1ab/nsp2485V485IGtcAtc11AY.1190.000035
ORF1ab/nsp2485V485AgTcgCc11AY.140.000088
ORF1ab/nsp2485V485FGtcTtc11AY.160.00038
ORF1ab/nsp2485V485AgTcgCc11AY.20.000356
ORF1ab/nsp2485V485VgtCgtT11AY.200.000039
ORF1ab/nsp2485V485IGtcAtc11AY.210.001898
ORF1ab/nsp2485V485delGTC---11AY.230.00007
ORF1ab/nsp2485V485FGtcTtc11AY.230.00007
ORF1ab/nsp2485V485GgTcgGc11AY.240.000431
ORF1ab/nsp2485V485FGtcTtc11AY.240.000431
ORF1ab/nsp2485V485delGTC---11AY.250.000006
ORF1ab/nsp2485V485FGtcTtc11AY.260.000028
ORF1ab/nsp2485V485VgtCgtT11AY.270.000065
ORF1ab/nsp2485V485AgTcgCc11AY.290.000016
ORF1ab/nsp2485V485VgtCgtT11AY.29.10.000221
ORF1ab/nsp2485V485delGTC---11AY.29.10.000221
ORF1ab/nsp2485V485FGtcTtc11AY.300.000396
ORF1ab/nsp2485V485GgTcgGc11AY.360.000148
ORF1ab/nsp2485V485IGtcAtc11AY.39.10.00004
ORF1ab/nsp2485V485AgTcgCc11AY.39.10.00004
ORF1ab/nsp2485V485LGtcCtc11AY.40.000002
ORF1ab/nsp2485V485delGTC---11AY.40.000002
ORF1ab/nsp2485V485AgTcgCc11AY.4.20.000022
ORF1ab/nsp2485V485VgtCgtT11AY.420.00004
ORF1ab/nsp2485V485VgtCgtT11AY.450.000122
ORF1ab/nsp2485V485IGtcAtc11AY.450.000122
ORF1ab/nsp2485V485delGTC---11AY.460.000104
ORF1ab/nsp2485V485IGtcAtc11AY.46.40.000165
ORF1ab/nsp2485V485FGtcTtc11AY.46.50.000198
ORF1ab/nsp2485V485FGtcTtc11AY.46.60.000072
ORF1ab/nsp2485V485FGtcTtc11AY.470.000031
ORF1ab/nsp2485V485AgTcgCc11AY.470.000031
ORF1ab/nsp2485V485AgTcgCc11AY.480.000465
ORF1ab/nsp2485V485IGtcAtc11AY.520.000814
ORF1ab/nsp2485V485FGtcTtc11AY.580.000907
ORF1ab/nsp2485V485delGTC---11AY.60.000041
ORF1ab/nsp2485V485AgTcgCc11AY.610.000105
ORF1ab/nsp2485V485VgtCgtT11AY.610.000105
ORF1ab/nsp2485V485IGtcAtc11AY.680.000274
ORF1ab/nsp2485V485AgTcgCc11AY.7.10.000113
ORF1ab/nsp2485V485delGTC---11AY.750.000056
ORF1ab/nsp2485V485FGtcTtc11AY.75.10.00018
ORF1ab/nsp2485V485IGtcAtc11AY.880.000884
ORF1ab/nsp2485V485AgTcgCc11AY.940.000443
ORF1ab/nsp2485V485FGtcTtc11AY.980.000079
ORF1ab/nsp2485V485VgtCgtT11AY.980.000079
ORF1ab/nsp2485V485delGTC---11AY.990.001049
ORF1ab/nsp2485V485VgtCgtT11B0.000128
ORF1ab/nsp2485V485RGTcCGc11B.10.000009
ORF1ab/nsp2485V485AgTcgCc11B.1.1.10.000327
ORF1ab/nsp2485V485AgTcgCc11B.1.1.1530.001095
ORF1ab/nsp2485V485IGtcAtc11B.1.1.1610.003534
ORF1ab/nsp2485V485IGtcAtc11B.1.1.2000.007463
ORF1ab/nsp2485V485IGtcAtc11B.1.1.2050.003717
ORF1ab/nsp2485V485IGtcAtc11B.1.1.2070.001182
ORF1ab/nsp2485V485FGtcTtc11B.1.1.2140.000055
ORF1ab/nsp2485V485VgtCgtT11B.1.1.2360.006897
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3060.000438
ORF1ab/nsp2485V485IGtcAtc11B.1.1.3090.005848
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3110.000358
ORF1ab/nsp2485V485AgTcgCc11B.1.1.3160.000925
ORF1ab/nsp2485V485IGtcAtc11B.1.1.3370.003597
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3690.000446
ORF1ab/nsp2485V485VgtCgtT11B.1.1.3890.006061
ORF1ab/nsp2485V485delGTC---11B.1.1.4160.000905
ORF1ab/nsp2485V485IGtcAtc11B.1.1.5070.008696
ORF1ab/nsp2485V485IGtcAtc11B.1.1.5190.00004
ORF1ab/nsp2485V485GgTcgGc11B.1.1.520.012195
ORF1ab/nsp2485V485del2gTCg--11B.1.1.70.000001
ORF1ab/nsp2485V485GgTcgGc11B.1.1.70.000001
ORF1ab/nsp2485V485LGtcCtc11B.1.1.70.000001
ORF1ab/nsp2485V485VgtCgtT11B.1.1100.004525
ORF1ab/nsp2485V485IGtcAtc11B.1.1110.001175
ORF1ab/nsp2485V485VgtCgtT11B.1.1280.000635
ORF1ab/nsp2485V485VgtCgtT11B.1.160.160.000929
ORF1ab/nsp2485V485GgTcgGc11B.1.1770.000013
ORF1ab/nsp2485V485delGTC---11B.1.1770.000013
ORF1ab/nsp2485V485FGtcTtc11B.1.1770.000013
ORF1ab/nsp2485V485AgTcgCc11B.1.177.120.000152
ORF1ab/nsp2485V485VgtCgtT11B.1.177.320.00135
ORF1ab/nsp2485V485VgtCgtT11B.1.177.450.000381
ORF1ab/nsp2485V485FGtcTtc11B.1.177.70.000165
ORF1ab/nsp2485V485delGTC---11B.1.1790.003759
ORF1ab/nsp2485V485IGtcAtc11B.1.1890.004292
ORF1ab/nsp2485V485LGtcCtc11B.1.20.000009
ORF1ab/nsp2485V485GgTcgGc11B.1.20.000009
ORF1ab/nsp2485V485IGtcAtc11B.1.2100.002132
ORF1ab/nsp2485V485AgTcgCc11B.1.220.001318
ORF1ab/nsp2485V485IGtcAtc11B.1.221.30.000833
ORF1ab/nsp2485V485FGtcTtc11B.1.2430.00007
ORF1ab/nsp2485V485LGtcCtc11B.1.2430.00007
ORF1ab/nsp2485V485IGtcAtc11B.1.3240.001605
ORF1ab/nsp2485V485GgTcgGc11B.1.3510.00003
ORF1ab/nsp2485V485IGtcAtc11B.1.351.20.000303
ORF1ab/nsp2485V485VgtCgtA11B.1.351.30.000876
ORF1ab/nsp2485V485DgTcgAc11B.1.360.000146
ORF1ab/nsp2485V485FGtcTtc11B.1.360.000146
ORF1ab/nsp2485V485VgtCgtT11B.1.36.170.000494
ORF1ab/nsp2485V485IGtcAtc11B.1.3950.007042
ORF1ab/nsp2485V485AgTcgCc11B.1.3990.001934
ORF1ab/nsp2485V485VgtCgtA11B.1.4160.001269
ORF1ab/nsp2485V485IGtcAtc11B.1.4170.028571
ORF1ab/nsp2485V485FGtcTtc11B.1.4290.000024
ORF1ab/nsp2485V485DgTcgAc11B.1.4660.023256
ORF1ab/nsp2485V485AgTcgCc11B.1.4750.142857
ORF1ab/nsp2485V485AgTcgCc11B.1.4970.000315
ORF1ab/nsp2485V485GgTcgGc11B.1.4970.000315
ORF1ab/nsp2485V485IGtcAtc11B.1.5170.000427
ORF1ab/nsp2485V485IGtcAtc11B.1.5260.000024
ORF1ab/nsp2485V485LGtcCtc11B.1.5460.003704
ORF1ab/nsp2485V485IGtcAtc11B.1.5560.007519
ORF1ab/nsp2485V485delGTC---11B.1.5610.000397
ORF1ab/nsp2485V485IGtcAtc11B.1.5640.000426
ORF1ab/nsp2485V485IGtcAtc11B.1.5660.019231
ORF1ab/nsp2485V485IGtcAtc11B.1.5690.014493
ORF1ab/nsp2485V485AgTcgCc11B.1.5750.000303
ORF1ab/nsp2485V485IGtcAtc11B.1.5760.000907
ORF1ab/nsp2485V485IGtcAtc11B.1.5770.000687
ORF1ab/nsp2485V485FGtCTtT11B.1.5770.000687
ORF1ab/nsp2485V485IGtcAtc11B.1.5810.009434
ORF1ab/nsp2485V485IGtcAtc11B.1.5870.001898
ORF1ab/nsp2485V485VgtCgtT11B.1.5950.000261
ORF1ab/nsp2485V485IGtcAtc11B.1.6000.005848
ORF1ab/nsp2485V485IGtcAtc11B.1.6050.005952
ORF1ab/nsp2485V485IGtcAtc11B.1.6120.002653
ORF1ab/nsp2485V485VgtCgtT11B.1.617.10.000129
ORF1ab/nsp2485V485VgtCgtT11B.1.780.008547
ORF1ab/nsp2485V485IGtcAtc11B.1.780.008547
ORF1ab/nsp2485V485delGTC---11B.570.015152
ORF1ab/nsp2485V485AgTcgCc11C.160.00106
ORF1ab/nsp2485V485LGtcCtc11D.20.000075
ORF1ab/nsp2485V485IGtcAtc11D.20.000075
ORF1ab/nsp2485V485AgTcgCc11D.20.000075
ORF1ab/nsp2485V485FGtcTtc11P.10.000016
ORF1ab/nsp2485V485delGTC---11P.10.000016
ORF1ab/nsp2485V485IGtcAtc11P.10.000016
ORF1ab/nsp2485V485AgTcgCc11P.10.000016
ORF1ab/nsp2485V485IGtcAtc11P.1.100.000269
ORF1ab/nsp2485V485IGtcAtc11P.1.140.000048
ORF1ab/nsp2485V485FGtcTtc11P.1.150.000232
ORF1ab/nsp2485V485VgtCgtT11P.1.150.000232
ORF1ab/nsp2485V485delGTC---11P.1.150.000232
ORF1ab/nsp2485V485IGtcAtc11P.1.150.000232
ORF1ab/nsp2485V485FGtcTtc11P.1.40.000977
ORF1ab/nsp2485V485delGTC---11P.20.000187
ORF1ab/nsp2485V485IGtcAtc11Q.10.000126
ORF1ab/nsp2485V485IGtcAtc11Q.80.000165
ORF1ab/nsp2485V485VgtCgtT11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.