CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 483

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2483Q483KQ663KnonsynCaaAaa95895812252-2254
ORF1ab/nsp2483Q483QQ663QsyncaAcaG37637612252-2254
ORF1ab/nsp2483Q483RQ663RnonsyncAacGa16416412252-2254
ORF1ab/nsp2483Q483delQ663deldelCAA---656512252-2254
ORF1ab/nsp2483Q483HQ663HnonsyncaAcaC33220.6666672252-2254
ORF1ab/nsp2483Q483HQ663HnonsyncaAcaT33110.3333332252-2254
ORF1ab/nsp2483Q483EQ663EnonsynCaaGaa8812252-2254
ORF1ab/nsp2483Q483XQ663XnonsynCaaTaa6612252-2254
ORF1ab/nsp2483Q483LQ663LnonsyncAacTa5512252-2254
ORF1ab/nsp2483Q483del1Q663del1delCaa-aa2212252-2254
ORF1ab/nsp2483Q483FQ663FnonsynCAATTT1112252-2254

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2483Q483KCaaAaa958958All0.000183
ORF1ab/nsp2483Q483QcaAcaG376376All0.000072
ORF1ab/nsp2483Q483KCaaAaa367367B.1.1.70.000329
ORF1ab/nsp2483Q483QcaAcaG218218B.1.1.70.000195
ORF1ab/nsp2483Q483RcAacGa164164All0.000031
ORF1ab/nsp2483Q483KCaaAaa114114AY.730.075848
ORF1ab/nsp2483Q483KCaaAaa6969AY.260.001953
ORF1ab/nsp2483Q483RcAacGa6969AY.40.000107
ORF1ab/nsp2483Q483delCAA---6565All0.000012
ORF1ab/nsp2483Q483KCaaAaa4545B.1.1.2220.00918
ORF1ab/nsp2483Q483KCaaAaa4444B.1.5240.061885
ORF1ab/nsp2483Q483KCaaAaa4141AY.40.000064
ORF1ab/nsp2483Q483KCaaAaa3737AY.340.003588
ORF1ab/nsp2483Q483HcaAcaC2233All0.000004
ORF1ab/nsp2483Q483HcaAcaT1133All0.000002
ORF1ab/nsp2483Q483KCaaAaa3333B.1.617.20.000124
ORF1ab/nsp2483Q483QcaAcaG3131B.1.617.20.000117
ORF1ab/nsp2483Q483KCaaAaa2424AY.660.025668
ORF1ab/nsp2483Q483RcAacGa2424B.10.00022
ORF1ab/nsp2483Q483KCaaAaa2424B.1.4070.857143
ORF1ab/nsp2483Q483QcaAcaG2222AY.1020.000583
ORF1ab/nsp2483Q483KCaaAaa2020B.10.000183
ORF1ab/nsp2483Q483delCAA---1818B.1.1.70.000016
ORF1ab/nsp2483Q483KCaaAaa1818Q.80.002968
ORF1ab/nsp2483Q483QcaAcaG1717B.1.1770.000224
ORF1ab/nsp2483Q483QcaAcaG1313AY.40.00002
ORF1ab/nsp2483Q483RcAacGa1010AY.250.00006
ORF1ab/nsp2483Q483RcAacGa1010B.1.1.70.000009
ORF1ab/nsp2483Q483KCaaAaa99AY.430.00004
ORF1ab/nsp2483Q483KCaaAaa99AY.750.000504
ORF1ab/nsp2483Q483ECaaGaa88All0.000002
ORF1ab/nsp2483Q483KCaaAaa88AY.450.000973
ORF1ab/nsp2483Q483QcaAcaG88AY.990.008395
ORF1ab/nsp2483Q483QcaAcaG88B.1.20.00007
ORF1ab/nsp2483Q483KCaaAaa77AY.4.20.000152
ORF1ab/nsp2483Q483HcaAcaC67B.1.2580.000399
ORF1ab/nsp2483Q483HcaAcaT17B.1.2580.000067
ORF1ab/nsp2483Q483XCaaTaa66All0.000001
ORF1ab/nsp2483Q483KCaaAaa66AY.1020.000159
ORF1ab/nsp2483Q483QcaAcaG66AY.470.000187
ORF1ab/nsp2483Q483QcaAcaG66B.10.000055
ORF1ab/nsp2483Q483RcAacGa66B.1.20.000053
ORF1ab/nsp2483Q483KCaaAaa66P.10.000095
ORF1ab/nsp2483Q483LcAacTa55All0.000001
ORF1ab/nsp2483Q483KCaaAaa55AY.30.00005
ORF1ab/nsp2483Q483RcAacGa55AY.390.000124
ORF1ab/nsp2483Q483RcAacGa55AY.440.00003
ORF1ab/nsp2483Q483KCaaAaa55AY.440.00003
ORF1ab/nsp2483Q483delCAA---55B.10.000046
ORF1ab/nsp2483Q483KCaaAaa55B.1.3510.000149
ORF1ab/nsp2483Q483delCAA---55B.1.617.20.000019
ORF1ab/nsp2483Q483RcAacGa55P.10.000079
ORF1ab/nsp2483Q483KCaaAaa44AY.1200.000149
ORF1ab/nsp2483Q483QcaAcaG44AY.30.00004
ORF1ab/nsp2483Q483QcaAcaG44AY.440.000024
ORF1ab/nsp2483Q483KCaaAaa44AY.470.000124
ORF1ab/nsp2483Q483HcaAcaC44AY.540.000381
ORF1ab/nsp2483Q483delCAA---44B.1.10.000073
ORF1ab/nsp2483Q483KCaaAaa44B.1.10.000073
ORF1ab/nsp2483Q483HcaAcaT24B.1.1.70.000002
ORF1ab/nsp2483Q483HcaAcaC24B.1.1.70.000002
ORF1ab/nsp2483Q483KCaaAaa33AY.1190.000106
ORF1ab/nsp2483Q483QcaAcaG33AY.390.000074
ORF1ab/nsp2483Q483QcaAcaG33AY.430.000013
ORF1ab/nsp2483Q483RcAacGa33AY.570.001969
ORF1ab/nsp2483Q483QcaAcaG33B.1.1.2220.000612
ORF1ab/nsp2483Q483KCaaAaa33B.1.1.330.001263
ORF1ab/nsp2483Q483delCAA---33B.1.1.330.001263
ORF1ab/nsp2483Q483RcAacGa33B.1.2430.000209
ORF1ab/nsp2483Q483RcAacGa33B.1.617.20.000011
ORF1ab/nsp2483Q483del1Caa-aa22All0
ORF1ab/nsp2483Q483QcaAcaG22AY.1030.000012
ORF1ab/nsp2483Q483QcaAcaG22AY.1190.000071
ORF1ab/nsp2483Q483KCaaAaa22AY.250.000012
ORF1ab/nsp2483Q483KCaaAaa22AY.3.10.000171
ORF1ab/nsp2483Q483delCAA---22AY.350.000466
ORF1ab/nsp2483Q483RcAacGa22AY.430.000009
ORF1ab/nsp2483Q483QcaAcaG22AY.670.000929
ORF1ab/nsp2483Q483QcaAcaG22AY.870.001665
ORF1ab/nsp2483Q483KCaaAaa22AY.9.10.000167
ORF1ab/nsp2483Q483HcaAcaC22B.10.000018
ORF1ab/nsp2483Q483RcAacGa22B.1.1.2410.004141
ORF1ab/nsp2483Q483KCaaAaa22B.1.1.3330.002153
ORF1ab/nsp2483Q483delCAA---22B.1.1.3480.001592
ORF1ab/nsp2483Q483KCaaAaa22B.1.1770.000026
ORF1ab/nsp2483Q483QcaAcaG22B.1.177.20.009091
ORF1ab/nsp2483Q483XCaaTaa22B.1.20.000018
ORF1ab/nsp2483Q483KCaaAaa22B.1.2180.010309
ORF1ab/nsp2483Q483RcAacGa22B.1.3510.000059
ORF1ab/nsp2483Q483delCAA---22B.1.4240.016129
ORF1ab/nsp2483Q483delCAA---22B.1.4290.000047
ORF1ab/nsp2483Q483ECaaGaa22B.1.5250.000226
ORF1ab/nsp2483Q483delCAA---22N.60.014184
ORF1ab/nsp2483Q483QcaAcaG22P.10.000032
ORF1ab/nsp2483Q483RcAacGa22P.1.170.000324
ORF1ab/nsp2483Q483QcaAcaG22P.1.70.000639
ORF1ab/nsp2483Q483delCAA---11A0.000387
ORF1ab/nsp2483Q483RcAacGa11A0.000387
ORF1ab/nsp2483Q483RcAacGa11AD.20.000219
ORF1ab/nsp2483Q483FCAATTT11All0
ORF1ab/nsp2483Q483HcaAcaT11AY.1000.000046
ORF1ab/nsp2483Q483KCaaAaa11AY.1000.000046
ORF1ab/nsp2483Q483KCaaAaa11AY.1010.00049
ORF1ab/nsp2483Q483ECaaGaa11AY.1020.000027
ORF1ab/nsp2483Q483KCaaAaa11AY.1030.000006
ORF1ab/nsp2483Q483QcaAcaG11AY.1060.000335
ORF1ab/nsp2483Q483delCAA---11AY.1080.001103
ORF1ab/nsp2483Q483KCaaAaa11AY.1110.000183
ORF1ab/nsp2483Q483HcaAcaC11AY.1190.000035
ORF1ab/nsp2483Q483KCaaAaa11AY.120.2.10.000498
ORF1ab/nsp2483Q483delCAA---11AY.230.00007
ORF1ab/nsp2483Q483KCaaAaa11AY.230.00007
ORF1ab/nsp2483Q483HcaAcaC11AY.250.000006
ORF1ab/nsp2483Q483XCaaTaa11AY.250.000006
ORF1ab/nsp2483Q483QcaAcaG11AY.250.000006
ORF1ab/nsp2483Q483delCAA---11AY.250.000006
ORF1ab/nsp2483Q483LcAacTa11AY.250.000006
ORF1ab/nsp2483Q483delCAA---11AY.260.000028
ORF1ab/nsp2483Q483HcaAcaT11AY.270.000065
ORF1ab/nsp2483Q483RcAacGa11AY.270.000065
ORF1ab/nsp2483Q483delCAA---11AY.29.10.000221
ORF1ab/nsp2483Q483RcAacGa11AY.30.00001
ORF1ab/nsp2483Q483RcAacGa11AY.320.000532
ORF1ab/nsp2483Q483ECaaGaa11AY.330.000067
ORF1ab/nsp2483Q483KCaaAaa11AY.330.000067
ORF1ab/nsp2483Q483del1Caa-aa11AY.390.000025
ORF1ab/nsp2483Q483KCaaAaa11AY.390.000025
ORF1ab/nsp2483Q483delCAA---11AY.40.000002
ORF1ab/nsp2483Q483HcaAcaC11AY.40.000002
ORF1ab/nsp2483Q483QcaAcaG11AY.4.40.000409
ORF1ab/nsp2483Q483ECaaGaa11AY.430.000004
ORF1ab/nsp2483Q483delCAA---11AY.460.000104
ORF1ab/nsp2483Q483HcaAcaT11AY.470.000031
ORF1ab/nsp2483Q483RcAacGa11AY.50.000021
ORF1ab/nsp2483Q483KCaaAaa11AY.50.000021
ORF1ab/nsp2483Q483QcaAcaG11AY.50.000021
ORF1ab/nsp2483Q483delCAA---11AY.60.000041
ORF1ab/nsp2483Q483KCaaAaa11AY.60.000041
ORF1ab/nsp2483Q483QcaAcaG11AY.610.000105
ORF1ab/nsp2483Q483KCaaAaa11AY.670.000464
ORF1ab/nsp2483Q483KCaaAaa11AY.680.000274
ORF1ab/nsp2483Q483KCaaAaa11AY.700.000209
ORF1ab/nsp2483Q483LcAacTa11AY.750.000056
ORF1ab/nsp2483Q483delCAA---11AY.750.000056
ORF1ab/nsp2483Q483KCaaAaa11AY.790.001211
ORF1ab/nsp2483Q483KCaaAaa11AY.940.000443
ORF1ab/nsp2483Q483QcaAcaG11AY.98.10.000048
ORF1ab/nsp2483Q483delCAA---11AY.990.001049
ORF1ab/nsp2483Q483KCaaAaa11AY.99.20.000092
ORF1ab/nsp2483Q483RcAacGa11AY.99.20.000092
ORF1ab/nsp2483Q483delCAA---11AZ.20.000821
ORF1ab/nsp2483Q483XCaaTaa11B.10.000009
ORF1ab/nsp2483Q483LcAacTa11B.10.000009
ORF1ab/nsp2483Q483HcaAcaT11B.1.10.000018
ORF1ab/nsp2483Q483KCaaAaa11B.1.1.1130.006993
ORF1ab/nsp2483Q483QcaAcaG11B.1.1.1720.018182
ORF1ab/nsp2483Q483KCaaAaa11B.1.1.1980.001468
ORF1ab/nsp2483Q483KCaaAaa11B.1.1.2160.00089
ORF1ab/nsp2483Q483QcaAcaG11B.1.1.280.000311
ORF1ab/nsp2483Q483LcAacTa11B.1.1.3010.001179
ORF1ab/nsp2483Q483RcAacGa11B.1.1.370.000193
ORF1ab/nsp2483Q483KCaaAaa11B.1.1.3890.006061
ORF1ab/nsp2483Q483QcaAcaG11B.1.1.4130.006897
ORF1ab/nsp2483Q483delCAA---11B.1.1.4160.000905
ORF1ab/nsp2483Q483HcaAcaC11B.1.1.4640.001473
ORF1ab/nsp2483Q483HcaAcaC11B.1.1.5190.00004
ORF1ab/nsp2483Q483QcaAcaG11B.1.1.5190.00004
ORF1ab/nsp2483Q483del1Caa-aa11B.1.1.70.000001
ORF1ab/nsp2483Q483HcaAcaC11B.1.130.002375
ORF1ab/nsp2483Q483RcAacGa11B.1.1570.002985
ORF1ab/nsp2483Q483KCaaAaa11B.1.1570.002985
ORF1ab/nsp2483Q483QcaAcaG11B.1.1600.000031
ORF1ab/nsp2483Q483XCaaTaa11B.1.160.320.004292
ORF1ab/nsp2483Q483LcAacTa11B.1.1770.000013
ORF1ab/nsp2483Q483KCaaAaa11B.1.177.150.000631
ORF1ab/nsp2483Q483RcAacGa11B.1.177.150.000631
ORF1ab/nsp2483Q483KCaaAaa11B.1.177.570.000281
ORF1ab/nsp2483Q483delCAA---11B.1.177.730.000566
ORF1ab/nsp2483Q483HcaAcaC11B.1.177.810.000189
ORF1ab/nsp2483Q483delCAA---11B.1.1790.003759
ORF1ab/nsp2483Q483HcaAcaC11B.1.20.000009
ORF1ab/nsp2483Q483KCaaAaa11B.1.20.000009
ORF1ab/nsp2483Q483HcaAcaT11B.1.2060.000816
ORF1ab/nsp2483Q483XCaaTaa11B.1.2210.000071
ORF1ab/nsp2483Q483QcaAcaG11B.1.240.20.030303
ORF1ab/nsp2483Q483ECaaGaa11B.1.3110.000275
ORF1ab/nsp2483Q483KCaaAaa11B.1.3400.004292
ORF1ab/nsp2483Q483HcaAcaT11B.1.3510.00003
ORF1ab/nsp2483Q483QcaAcaG11B.1.3510.00003
ORF1ab/nsp2483Q483HcaAcaT11B.1.351.30.000876
ORF1ab/nsp2483Q483KCaaAaa11B.1.351.30.000876
ORF1ab/nsp2483Q483QcaAcaG11B.1.360.000146
ORF1ab/nsp2483Q483KCaaAaa11B.1.36.80.001
ORF1ab/nsp2483Q483RcAacGa11B.1.3950.007042
ORF1ab/nsp2483Q483KCaaAaa11B.1.4290.000024
ORF1ab/nsp2483Q483KCaaAaa11B.1.5170.000427
ORF1ab/nsp2483Q483RcAacGa11B.1.5400.009709
ORF1ab/nsp2483Q483delCAA---11B.1.5610.000397
ORF1ab/nsp2483Q483FCAATTT11B.1.5770.000687
ORF1ab/nsp2483Q483HcaAcaT11B.1.5960.000087
ORF1ab/nsp2483Q483QcaAcaG11B.1.617.10.000129
ORF1ab/nsp2483Q483ECaaGaa11B.1.617.20.000004
ORF1ab/nsp2483Q483QcaAcaG11B.1.6210.000089
ORF1ab/nsp2483Q483delCAA---11B.570.015152
ORF1ab/nsp2483Q483RcAacGa11C.370.000116
ORF1ab/nsp2483Q483KCaaAaa11D.20.000075
ORF1ab/nsp2483Q483delCAA---11P.10.000016
ORF1ab/nsp2483Q483ECaaGaa11P.10.000016
ORF1ab/nsp2483Q483KCaaAaa11P.1.140.000048
ORF1ab/nsp2483Q483delCAA---11P.1.150.000232
ORF1ab/nsp2483Q483delCAA---11P.20.000187
ORF1ab/nsp2483Q483KCaaAaa11R.10.00009