CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 479 & Codon = Ttt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2479I479FI659FnonsynAttTtt161612240-2242

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2479I479FAttTtt1616All0.000003
ORF1ab/nsp2479I479FAttTtt22AY.250.000012
ORF1ab/nsp2479I479FAttTtt22AY.470.000062
ORF1ab/nsp2479I479FAttTtt22B.10.000018
ORF1ab/nsp2479I479FAttTtt22B.1.1.70.000002
ORF1ab/nsp2479I479FAttTtt11A.20.000662
ORF1ab/nsp2479I479FAttTtt11A.2.40.003367
ORF1ab/nsp2479I479FAttTtt11A.2.50.000499
ORF1ab/nsp2479I479FAttTtt11B.1.1.2140.000055
ORF1ab/nsp2479I479FAttTtt11B.1.3690.000285
ORF1ab/nsp2479I479FAttTtt11B.1.5810.009434
ORF1ab/nsp2479I479FAttTtt11P.1.10.000318
ORF1ab/nsp2479I479FAttTtt11P.1.170.000162