CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 460

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2460E460DE640DnonsyngaGgaT338233500.9905382183-2185
ORF1ab/nsp2460E460DE640DnonsyngaGgaC3382320.009461862183-2185
ORF1ab/nsp2460E460EE640EsyngaGgaA41541512183-2185
ORF1ab/nsp2460E460GE640GnonsyngAggGg2602530.9730772183-2185
ORF1ab/nsp2460E460GE640GnonsyngAGgGA26040.01538462183-2185
ORF1ab/nsp2460E460GE640GnonsyngAGgGT26020.007692312183-2185
ORF1ab/nsp2460E460GE640GnonsyngAGgGC26010.003846152183-2185
ORF1ab/nsp2460E460AE640AnonsyngAggCg1631610.987732183-2185
ORF1ab/nsp2460E460AE640AnonsyngAGgCC16310.006134972183-2185
ORF1ab/nsp2460E460AE640AnonsyngAGgCT16310.006134972183-2185
ORF1ab/nsp2460E460KE640KnonsynGagAag88830.9431822183-2185
ORF1ab/nsp2460E460KE640KnonsynGaGAaA8850.05681822183-2185
ORF1ab/nsp2460E460delE640deldelGAG---525212183-2185
ORF1ab/nsp2460E460XE640XnonsynGagTag222212183-2185
ORF1ab/nsp2460E460QE640QnonsynGagCag101012183-2185
ORF1ab/nsp2460E460VE640VnonsyngAggTg5512183-2185
ORF1ab/nsp2460E460RE640RnonsynGAGAGA530.62183-2185
ORF1ab/nsp2460E460RE640RnonsynGAgAGg520.42183-2185
ORF1ab/nsp2460E460del1E640del1delgAgg-g310.3333332183-2185
ORF1ab/nsp2460E460del1E640del1delGag-ag310.3333332183-2185
ORF1ab/nsp2460E460del2E640del2delGAg--g310.3333332183-2185
ORF1ab/nsp2460E460del1E640del1delgAGg-T310.3333332183-2185
ORF1ab/nsp2460E460del2E640del2delgAGg--310.3333332183-2185
ORF1ab/nsp2460E460del2E640del2delGAGA--310.3333332183-2185
ORF1ab/nsp2460E460HE640HnonsynGaGCaT1112183-2185
ORF1ab/nsp2460E460WE640WnonsynGAgTGg1112183-2185

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2460E460DgaGgaT33503382All0.000641
ORF1ab/nsp2460E460DgaGgaC323382All0.000006
ORF1ab/nsp2460E460DgaGgaT29762977AY.370.940582
ORF1ab/nsp2460E460DgaGgaC12977AY.370.000316
ORF1ab/nsp2460E460EgaGgaA415415All0.000079
ORF1ab/nsp2460E460GgAggGg253260All0.000048
ORF1ab/nsp2460E460GgAGgGA4260All0.000001
ORF1ab/nsp2460E460GgAGgGT2260All0
ORF1ab/nsp2460E460GgAGgGC1260All0
ORF1ab/nsp2460E460EgaGgaA189189B.1.20.001664
ORF1ab/nsp2460E460AgAggCg161163All0.000031
ORF1ab/nsp2460E460AgAGgCC1163All0
ORF1ab/nsp2460E460AgAGgCT1163All0
ORF1ab/nsp2460E460DgaGgaT9797B.1.617.20.000365
ORF1ab/nsp2460E460KGagAag8388All0.000016
ORF1ab/nsp2460E460KGaGAaA588All0.000001
ORF1ab/nsp2460E460GgAggGg7171B.1.1.70.000064
ORF1ab/nsp2460E460AgAggCg7171B.1.617.20.000267
ORF1ab/nsp2460E460DgaGgaT5454AY.40.000084
ORF1ab/nsp2460E460delGAG---5252All0.00001
ORF1ab/nsp2460E460EgaGgaA4949B.1.1.70.000044
ORF1ab/nsp2460E460DgaGgaT4444B.1.1.70.000039
ORF1ab/nsp2460E460DgaGgaC2938AY.430.000128
ORF1ab/nsp2460E460DgaGgaT938AY.430.00004
ORF1ab/nsp2460E460GgAggGg3535AY.330.002337
ORF1ab/nsp2460E460KGagAag2626B.1.1.3010.03066
ORF1ab/nsp2460E460EgaGgaA2424AY.370.007585
ORF1ab/nsp2460E460AgAggCg2323AY.670.010678
ORF1ab/nsp2460E460XGagTag2222All0.000004
ORF1ab/nsp2460E460DgaGgaT2222B.1.20.000194
ORF1ab/nsp2460E460EgaGgaA1818B.10.000165
ORF1ab/nsp2460E460GgAggGg1818B.1.4290.000424
ORF1ab/nsp2460E460EgaGgaA1616AY.40.000025
ORF1ab/nsp2460E460GgAggGg1013B.10.000092
ORF1ab/nsp2460E460GgAGgGA213B.10.000018
ORF1ab/nsp2460E460GgAGgGT113B.10.000009
ORF1ab/nsp2460E460EgaGgaA1313B.1.1.10.004247
ORF1ab/nsp2460E460EgaGgaA1313B.1.36.180.005462
ORF1ab/nsp2460E460DgaGgaT1313B.1.6210.001151
ORF1ab/nsp2460E460AgAggCg1212B.1.4200.125
ORF1ab/nsp2460E460EgaGgaA1212B.1.617.20.000045
ORF1ab/nsp2460E460DgaGgaT1111AY.130.001771
ORF1ab/nsp2460E460KGagAag1111AY.40.000017
ORF1ab/nsp2460E460GgAggGg1011AY.40.000016
ORF1ab/nsp2460E460GgAGgGT111AY.40.000002
ORF1ab/nsp2460E460KGagAag911B.1.1.70.000008
ORF1ab/nsp2460E460KGaGAaA211B.1.1.70.000002
ORF1ab/nsp2460E460GgAggGg1111B.1.5260.000259
ORF1ab/nsp2460E460QGagCag1010All0.000002
ORF1ab/nsp2460E460EgaGgaA1010AY.1030.000062
ORF1ab/nsp2460E460DgaGgaT1010AY.200.000389
ORF1ab/nsp2460E460delGAG---99B.1.1.70.000008
ORF1ab/nsp2460E460DgaGgaT88B.1.1770.000105
ORF1ab/nsp2460E460GgAggGg88B.1.617.20.00003
ORF1ab/nsp2460E460EgaGgaA88P.1.140.000382
ORF1ab/nsp2460E460AgAggCg77AY.40.000011
ORF1ab/nsp2460E460EgaGgaA77AY.750.000392
ORF1ab/nsp2460E460GgAggGg77C.350.005418
ORF1ab/nsp2460E460EgaGgaA77P.10.00011
ORF1ab/nsp2460E460DgaGgaT66A.2.5.20.009434
ORF1ab/nsp2460E460DgaGgaT66AY.250.000036
ORF1ab/nsp2460E460GgAggGg66AY.650.003198
ORF1ab/nsp2460E460GgAggGg66B.1.1770.000079
ORF1ab/nsp2460E460GgAggGg66B.1.6300.031414
ORF1ab/nsp2460E460VgAggTg55All0.000001
ORF1ab/nsp2460E460RGAGAGA35All0.000001
ORF1ab/nsp2460E460RGAgAGg25All0
ORF1ab/nsp2460E460DgaGgaT55AY.1030.000031
ORF1ab/nsp2460E460GgAggGg55AY.1030.000031
ORF1ab/nsp2460E460EgaGgaA55AY.290.000079
ORF1ab/nsp2460E460DgaGgaT55AY.4.20.000108
ORF1ab/nsp2460E460DgaGgaT55AY.440.00003
ORF1ab/nsp2460E460delGAG---55B.10.000046
ORF1ab/nsp2460E460AgAggCg55B.1.20.000044
ORF1ab/nsp2460E460delGAG---55B.1.617.20.000019
ORF1ab/nsp2460E460GgAggGg44A.2.50.001996
ORF1ab/nsp2460E460GgAggGg44AY.250.000024
ORF1ab/nsp2460E460EgaGgaA44AY.30.00004
ORF1ab/nsp2460E460delGAG---44AY.40.000006
ORF1ab/nsp2460E460GgAggGg44AY.4.20.000087
ORF1ab/nsp2460E460AgAggCg44AY.430.000018
ORF1ab/nsp2460E460AgAggCg44AY.440.000024
ORF1ab/nsp2460E460DgaGgaT44AY.450.000487
ORF1ab/nsp2460E460QGagCag44AY.46.60.000289
ORF1ab/nsp2460E460DgaGgaT44B.10.000037
ORF1ab/nsp2460E460XGagTag44B.10.000037
ORF1ab/nsp2460E460KGagAag24B.10.000018
ORF1ab/nsp2460E460KGaGAaA24B.10.000018
ORF1ab/nsp2460E460DgaGgaT44B.1.10.000073
ORF1ab/nsp2460E460GgAggGg44B.1.1.630.001543
ORF1ab/nsp2460E460AgAggCg44B.1.1.70.000004
ORF1ab/nsp2460E460GgAggGg230.111111
ORF1ab/nsp2460E460AgAGgCC130.055556
ORF1ab/nsp2460E460GgAGgGA130.055556
ORF1ab/nsp2460E460AgAGgCT130.055556
ORF1ab/nsp2460E460AgAggCg130.055556
ORF1ab/nsp2460E460del1gAgg-g13All0
ORF1ab/nsp2460E460del1Gag-ag13All0
ORF1ab/nsp2460E460del2GAg--g13All0
ORF1ab/nsp2460E460del2gAGg--13All0
ORF1ab/nsp2460E460del2GAGA--13All0
ORF1ab/nsp2460E460del1gAGg-T13All0
ORF1ab/nsp2460E460GgAggGg33AY.1020.00008
ORF1ab/nsp2460E460KGagAag33AY.1030.000019
ORF1ab/nsp2460E460AgAggCg33AY.1030.000019
ORF1ab/nsp2460E460GgAggGg33AY.1070.001398
ORF1ab/nsp2460E460GgAggGg33AY.1130.000427
ORF1ab/nsp2460E460DgaGgaT33AY.1170.000254
ORF1ab/nsp2460E460GgAggGg33AY.200.000117
ORF1ab/nsp2460E460KGagAag33AY.30.00003
ORF1ab/nsp2460E460KGagAag33AY.430.000013
ORF1ab/nsp2460E460EgaGgaA33AY.430.000013
ORF1ab/nsp2460E460EgaGgaA33AY.50.000062
ORF1ab/nsp2460E460DgaGgaT33AY.600.002814
ORF1ab/nsp2460E460DgaGgaT33AY.610.000314
ORF1ab/nsp2460E460EgaGgaA33AY.790.003632
ORF1ab/nsp2460E460GgAggGg33AY.99.20.000276
ORF1ab/nsp2460E460EgaGgaA33B.1.10.000054
ORF1ab/nsp2460E460XGagTag33B.1.10.000054
ORF1ab/nsp2460E460DgaGgaT33B.1.1.2160.002671
ORF1ab/nsp2460E460delGAG---33B.1.1.330.001263
ORF1ab/nsp2460E460AgAggCg33B.1.1.750.031915
ORF1ab/nsp2460E460DgaGgaT33B.1.36.290.001552
ORF1ab/nsp2460E460DgaGgaT33P.20.00056
ORF1ab/nsp2460E460RGAGAGA120.055556
ORF1ab/nsp2460E460KGaGAaA120.055556
ORF1ab/nsp2460E460RGAgAGg120.055556
ORF1ab/nsp2460E460DgaGgaT120.055556
ORF1ab/nsp2460E460KGagAag120.055556
ORF1ab/nsp2460E460DgaGgaC120.055556
ORF1ab/nsp2460E460GgAggGg22A.2.5.10.009615
ORF1ab/nsp2460E460EgaGgaA22A.210.00554
ORF1ab/nsp2460E460DgaGgaT22AE.10.022727
ORF1ab/nsp2460E460KGagAag22AY.200.000078
ORF1ab/nsp2460E460KGagAag22AY.240.000862
ORF1ab/nsp2460E460AgAggCg22AY.250.000012
ORF1ab/nsp2460E460DgaGgaT22AY.260.000057
ORF1ab/nsp2460E460AgAggCg22AY.30.00002
ORF1ab/nsp2460E460EgaGgaA22AY.360.000296
ORF1ab/nsp2460E460XGagTag22AY.40.000003
ORF1ab/nsp2460E460GgAggGg22AY.430.000009
ORF1ab/nsp2460E460delGAG---22AY.430.000009
ORF1ab/nsp2460E460KGagAag22AY.440.000012
ORF1ab/nsp2460E460EgaGgaA22AY.440.000012
ORF1ab/nsp2460E460DgaGgaT22AY.460.000208
ORF1ab/nsp2460E460VgAggTg22AY.60.000082
ORF1ab/nsp2460E460DgaGgaT22AY.650.001066
ORF1ab/nsp2460E460GgAggGg22AY.75.10.000361
ORF1ab/nsp2460E460RGAgAGg12B.10.000009
ORF1ab/nsp2460E460RGAGAGA12B.10.000009
ORF1ab/nsp2460E460delGAG---22B.1.1.3480.001592
ORF1ab/nsp2460E460XGagTag22B.1.1.70.000002
ORF1ab/nsp2460E460EgaGgaA22B.1.1600.000062
ORF1ab/nsp2460E460EgaGgaA22B.1.1770.000026
ORF1ab/nsp2460E460KGagAag22B.1.1770.000026
ORF1ab/nsp2460E460KGagAag22B.1.177.860.000367
ORF1ab/nsp2460E460XGagTag22B.1.20.000018
ORF1ab/nsp2460E460GgAggGg22B.1.2580.000133
ORF1ab/nsp2460E460DgaGgaT22B.1.360.000292
ORF1ab/nsp2460E460delGAG---22B.1.4240.016129
ORF1ab/nsp2460E460DgaGgaT22B.1.4290.000047
ORF1ab/nsp2460E460delGAG---22B.1.4290.000047
ORF1ab/nsp2460E460DgaGgaT22B.1.5260.000047
ORF1ab/nsp2460E460KGagAag22B.1.617.20.000008
ORF1ab/nsp2460E460KGagAag22C.370.000232
ORF1ab/nsp2460E460delGAG---22N.60.014184
ORF1ab/nsp2460E460DgaGgaT22P.10.000032
ORF1ab/nsp2460E460delGAG---22P.20.000373
ORF1ab/nsp2460E460EgaGgaA110.055556
ORF1ab/nsp2460E460XGagTag110.055556
ORF1ab/nsp2460E460WGAgTGg110.055556
ORF1ab/nsp2460E460delGAG---11A0.000387
ORF1ab/nsp2460E460GgAGgGA11A0.000387
ORF1ab/nsp2460E460HGaGCaT11All0
ORF1ab/nsp2460E460WGAgTGg11All0
ORF1ab/nsp2460E460DgaGgaT11AU.20.002421
ORF1ab/nsp2460E460AgAggCg11AY.100.00053
ORF1ab/nsp2460E460XGagTag11AY.1030.000006
ORF1ab/nsp2460E460GgAggGg11AY.1060.000335
ORF1ab/nsp2460E460DgaGgaT11AY.1100.000113
ORF1ab/nsp2460E460EgaGgaA11AY.1110.000183
ORF1ab/nsp2460E460DgaGgaT11AY.1130.000142
ORF1ab/nsp2460E460QGagCag11AY.1170.000085
ORF1ab/nsp2460E460GgAGgGC11AY.130.000161
ORF1ab/nsp2460E460AgAggCg11AY.160.00038
ORF1ab/nsp2460E460KGagAag11AY.230.00007
ORF1ab/nsp2460E460DgaGgaT11AY.230.00007
ORF1ab/nsp2460E460AgAggCg11AY.260.000028
ORF1ab/nsp2460E460DgaGgaT11AY.30.00001
ORF1ab/nsp2460E460GgAggGg11AY.30.00001
ORF1ab/nsp2460E460AgAggCg11AY.300.000396
ORF1ab/nsp2460E460del1gAGg-T11AY.370.000316
ORF1ab/nsp2460E460AgAggCg11AY.39.10.00004
ORF1ab/nsp2460E460del2GAg--g11AY.40.000002
ORF1ab/nsp2460E460delGAG---11AY.4.50.000107
ORF1ab/nsp2460E460VgAggTg11AY.420.00004
ORF1ab/nsp2460E460QGagCag11AY.430.000004
ORF1ab/nsp2460E460del1Gag-ag11AY.430.000004
ORF1ab/nsp2460E460del1gAgg-g11AY.440.000006
ORF1ab/nsp2460E460GgAggGg11AY.440.000006
ORF1ab/nsp2460E460QGagCag11AY.440.000006
ORF1ab/nsp2460E460EgaGgaA11AY.450.000122
ORF1ab/nsp2460E460GgAggGg11AY.46.20.000635
ORF1ab/nsp2460E460GgAggGg11AY.46.40.000165
ORF1ab/nsp2460E460KGagAag11AY.50.000021
ORF1ab/nsp2460E460AgAggCg11AY.50.000021
ORF1ab/nsp2460E460GgAggGg11AY.5.40.000277
ORF1ab/nsp2460E460DgaGgaT11AY.540.000095
ORF1ab/nsp2460E460delGAG---11AY.60.000041
ORF1ab/nsp2460E460GgAggGg11AY.610.000105
ORF1ab/nsp2460E460DgaGgaT11AY.620.000436
ORF1ab/nsp2460E460AgAggCg11AY.620.000436
ORF1ab/nsp2460E460DgaGgaT11AY.710.000475
ORF1ab/nsp2460E460EgaGgaA11AY.740.000116
ORF1ab/nsp2460E460DgaGgaT11AY.740.000116
ORF1ab/nsp2460E460delGAG---11AY.750.000056
ORF1ab/nsp2460E460AgAggCg11AY.850.000427
ORF1ab/nsp2460E460DgaGgaT11AY.9.10.000084
ORF1ab/nsp2460E460GgAggGg11AY.9.2.10.001976
ORF1ab/nsp2460E460DgaGgaT11AY.930.000273
ORF1ab/nsp2460E460QGagCag11AY.960.002075
ORF1ab/nsp2460E460KGagAag11AY.98.10.000048
ORF1ab/nsp2460E460delGAG---11AY.990.001049
ORF1ab/nsp2460E460DgaGgaT11AY.99.20.000092
ORF1ab/nsp2460E460DgaGgaT11B0.000128
ORF1ab/nsp2460E460RGAGAGA11B0.000128
ORF1ab/nsp2460E460XGagTag11B0.000128
ORF1ab/nsp2460E460AgAggCg11B.10.000009
ORF1ab/nsp2460E460HGaGCaT11B.10.000009
ORF1ab/nsp2460E460VgAggTg11B.10.000009
ORF1ab/nsp2460E460AgAggCg11B.1.10.000018
ORF1ab/nsp2460E460GgAggGg11B.1.10.000018
ORF1ab/nsp2460E460delGAG---11B.1.10.000018
ORF1ab/nsp2460E460DgaGgaT11B.1.1.1280.007092
ORF1ab/nsp2460E460DgaGgaT11B.1.1.280.000311
ORF1ab/nsp2460E460DgaGgaT11B.1.1.2840.000107
ORF1ab/nsp2460E460EgaGgaA11B.1.1.3060.000438
ORF1ab/nsp2460E460DgaGgaT11B.1.1.3110.000358
ORF1ab/nsp2460E460GgAggGg11B.1.1.3170.000412
ORF1ab/nsp2460E460DgaGgaT11B.1.1.3480.000796
ORF1ab/nsp2460E460KGagAag11B.1.1.3720.000689
ORF1ab/nsp2460E460XGagTag11B.1.1.390.00051
ORF1ab/nsp2460E460delGAG---11B.1.1.4160.000905
ORF1ab/nsp2460E460EgaGgaA11B.1.1.4160.000905
ORF1ab/nsp2460E460KGagAag11B.1.1.500.000679
ORF1ab/nsp2460E460DgaGgaT11B.1.1.5190.00004
ORF1ab/nsp2460E460QGagCag11B.1.1.70.000001
ORF1ab/nsp2460E460VgAggTg11B.1.1.70.000001
ORF1ab/nsp2460E460GgAggGg11B.1.1600.000031
ORF1ab/nsp2460E460EgaGgaA11B.1.177.70.000165
ORF1ab/nsp2460E460delGAG---11B.1.1790.003759
ORF1ab/nsp2460E460GgAggGg11B.1.20.000009
ORF1ab/nsp2460E460del2gAGg--11B.1.20.000009
ORF1ab/nsp2460E460delGAG---11B.1.20.000009
ORF1ab/nsp2460E460DgaGgaT11B.1.2060.000816
ORF1ab/nsp2460E460AgAggCg11B.1.2210.000071
ORF1ab/nsp2460E460AgAggCg11B.1.2220.001692
ORF1ab/nsp2460E460AgAggCg11B.1.2430.00007
ORF1ab/nsp2460E460EgaGgaA11B.1.2430.00007
ORF1ab/nsp2460E460GgAggGg11B.1.258.170.000104
ORF1ab/nsp2460E460DgaGgaT11B.1.2840.013158
ORF1ab/nsp2460E460DgaGgaT11B.1.3050.002151
ORF1ab/nsp2460E460GgAggGg11B.1.3110.000275
ORF1ab/nsp2460E460GgAggGg11B.1.3130.006579
ORF1ab/nsp2460E460EgaGgaA11B.1.3510.00003
ORF1ab/nsp2460E460XGagTag11B.1.3510.00003
ORF1ab/nsp2460E460GgAggGg11B.1.3510.00003
ORF1ab/nsp2460E460AgAggCg11B.1.351.20.000303
ORF1ab/nsp2460E460KGagAag11B.1.360.000146
ORF1ab/nsp2460E460DgaGgaT11B.1.36.260.002857
ORF1ab/nsp2460E460AgAggCg11B.1.36.290.000517
ORF1ab/nsp2460E460KGagAag11B.1.36.310.001751
ORF1ab/nsp2460E460DgaGgaC11B.1.3620.001541
ORF1ab/nsp2460E460EgaGgaA11B.1.3930.028571
ORF1ab/nsp2460E460KGagAag11B.1.3960.000706
ORF1ab/nsp2460E460DgaGgaT11B.1.4160.001269
ORF1ab/nsp2460E460DgaGgaT11B.1.4240.008065
ORF1ab/nsp2460E460KGagAag11B.1.4270.00005
ORF1ab/nsp2460E460EgaGgaA11B.1.4290.000024
ORF1ab/nsp2460E460AgAggCg11B.1.4290.000024
ORF1ab/nsp2460E460EgaGgaA11B.1.4360.001029
ORF1ab/nsp2460E460GgAggGg11B.1.466.20.000391
ORF1ab/nsp2460E460AgAggCg11B.1.5250.000113
ORF1ab/nsp2460E460KGagAag11B.1.5260.000024
ORF1ab/nsp2460E460EgaGgaA11B.1.5600.00463
ORF1ab/nsp2460E460delGAG---11B.1.5610.000397
ORF1ab/nsp2460E460AgAggCg11B.1.5680.001111
ORF1ab/nsp2460E460AgAggCg11B.1.5800.004065
ORF1ab/nsp2460E460EgaGgaA11B.1.5810.009434
ORF1ab/nsp2460E460GgAggGg11B.1.5820.000491
ORF1ab/nsp2460E460EgaGgaA11B.1.5950.000261
ORF1ab/nsp2460E460XGagTag11B.1.5950.000261
ORF1ab/nsp2460E460DgaGgaT11B.1.5960.000087
ORF1ab/nsp2460E460EgaGgaA11B.1.5960.000087
ORF1ab/nsp2460E460del2GAGA--11B.1.617.20.000004
ORF1ab/nsp2460E460AgAggCg11B.1.619.10.000641
ORF1ab/nsp2460E460delGAG---11B.1.6210.000089
ORF1ab/nsp2460E460EgaGgaA11B.1.6210.000089
ORF1ab/nsp2460E460EgaGgaA11B.1.6370.000073
ORF1ab/nsp2460E460DgaGgaT11B.1.80.001972
ORF1ab/nsp2460E460KGagAag11B.230.002924
ORF1ab/nsp2460E460delGAG---11B.570.015152
ORF1ab/nsp2460E460XGagTag11B.6.10.026316
ORF1ab/nsp2460E460XGagTag11B.6.60.000889
ORF1ab/nsp2460E460DgaGgaT11C.390.018868
ORF1ab/nsp2460E460XGagTag11D.20.000075
ORF1ab/nsp2460E460DgaGgaT11D.20.000075
ORF1ab/nsp2460E460delGAG---11P.10.000016
ORF1ab/nsp2460E460GgAggGg11P.10.000016
ORF1ab/nsp2460E460QGagCag11P.1.10.000318
ORF1ab/nsp2460E460DgaGgaT11P.1.130.000898
ORF1ab/nsp2460E460delGAG---11P.1.150.000232
ORF1ab/nsp2460E460DgaGgaT11P.1.170.000162
ORF1ab/nsp2460E460DgaGgaT11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.