CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 442 & Codon = Aaa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2442E442KE622KnonsynGaaAaa19419412129-2131

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2442E442KGaaAaa194194All0.000037
ORF1ab/nsp2442E442KGaaAaa3939B.1.10.000707
ORF1ab/nsp2442E442KGaaAaa2323AY.40.000036
ORF1ab/nsp2442E442KGaaAaa1919B.1.1.70.000017
ORF1ab/nsp2442E442KGaaAaa1515AY.250.00009
ORF1ab/nsp2442E442KGaaAaa99B.10.000082
ORF1ab/nsp2442E442KGaaAaa88AY.1030.00005
ORF1ab/nsp2442E442KGaaAaa66AY.4.2.10.000894
ORF1ab/nsp2442E442KGaaAaa55B.1.3510.000149
ORF1ab/nsp2442E442KGaaAaa44A0.001548
ORF1ab/nsp2442E442KGaaAaa44B.1.20.000035
ORF1ab/nsp2442E442KGaaAaa44B.1.617.20.000015
ORF1ab/nsp2442E442KGaaAaa33AY.440.000018
ORF1ab/nsp2442E442KGaaAaa33AY.50.000062
ORF1ab/nsp2442E442KGaaAaa33B.1.1.5190.000119
ORF1ab/nsp2442E442KGaaAaa33D.20.000225
ORF1ab/nsp2442E442KGaaAaa22AY.1210.000271
ORF1ab/nsp2442E442KGaaAaa22AY.4.20.000043
ORF1ab/nsp2442E442KGaaAaa22AY.420.00008
ORF1ab/nsp2442E442KGaaAaa22B.1.1.2220.000408
ORF1ab/nsp2442E442KGaaAaa22B.1.1.3540.008772
ORF1ab/nsp2442E442KGaaAaa22B.1.360.000292
ORF1ab/nsp2442E442KGaaAaa22B.1.4270.000101
ORF1ab/nsp2442E442KGaaAaa22B.1.5250.000226
ORF1ab/nsp2442E442KGaaAaa22B.1.5650.001621
ORF1ab/nsp2442E442KGaaAaa22P.10.000032
ORF1ab/nsp2442E442KGaaAaa11AY.10.000396
ORF1ab/nsp2442E442KGaaAaa11AY.1020.000027
ORF1ab/nsp2442E442KGaaAaa11AY.1140.000231
ORF1ab/nsp2442E442KGaaAaa11AY.1170.000085
ORF1ab/nsp2442E442KGaaAaa11AY.1200.000037
ORF1ab/nsp2442E442KGaaAaa11AY.290.000016
ORF1ab/nsp2442E442KGaaAaa11AY.340.000097
ORF1ab/nsp2442E442KGaaAaa11AY.390.000025
ORF1ab/nsp2442E442KGaaAaa11AY.450.000122
ORF1ab/nsp2442E442KGaaAaa11AY.610.000105
ORF1ab/nsp2442E442KGaaAaa11AY.75.10.00018
ORF1ab/nsp2442E442KGaaAaa11AY.9.10.000084
ORF1ab/nsp2442E442KGaaAaa11B.1.1.2140.000055
ORF1ab/nsp2442E442KGaaAaa11B.1.1.3010.001179
ORF1ab/nsp2442E442KGaaAaa11B.1.1.4090.002833
ORF1ab/nsp2442E442KGaaAaa11B.1.1.4340.000349
ORF1ab/nsp2442E442KGaaAaa11B.1.177.160.000664
ORF1ab/nsp2442E442KGaaAaa11B.1.177.210.000076
ORF1ab/nsp2442E442KGaaAaa11B.1.177.510.004566
ORF1ab/nsp2442E442KGaaAaa11B.1.2210.000071
ORF1ab/nsp2442E442KGaaAaa11B.1.3380.008621
ORF1ab/nsp2442E442KGaaAaa11B.1.4290.000024
ORF1ab/nsp2442E442KGaaAaa11B.1.4970.000315
ORF1ab/nsp2442E442KGaaAaa11B.110.005128
ORF1ab/nsp2442E442KGaaAaa11B.350.007812
ORF1ab/nsp2442E442KGaaAaa11C.180.002591