CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 437

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2437F437LF617LnonsynttTttA9277970.8597632114-2116
ORF1ab/nsp2437F437LF617LnonsynTttCtt9271150.1240562114-2116
ORF1ab/nsp2437F437LF617LnonsynttTttG927150.01618122114-2116
ORF1ab/nsp2437F437FF617FsynttTttC18418412114-2116
ORF1ab/nsp2437F437VF617VnonsynTttGtt58570.9827592114-2116
ORF1ab/nsp2437F437VF617VnonsynTtTGtA5810.01724142114-2116
ORF1ab/nsp2437F437delF617deldelTTT---464612114-2116
ORF1ab/nsp2437F437IF617InonsynTttAtt212112114-2116
ORF1ab/nsp2437F437CF617CnonsyntTttGt191912114-2116
ORF1ab/nsp2437F437SF617SnonsyntTttCt17160.9411762114-2116
ORF1ab/nsp2437F437SF617SnonsyntTTtCC1710.05882352114-2116
ORF1ab/nsp2437F437del1F617del1delTtt-tt760.8571432114-2116
ORF1ab/nsp2437F437del1F617del1delttTtt-710.1428572114-2116
ORF1ab/nsp2437F437YF617YnonsyntTttAt4412114-2116
ORF1ab/nsp2437F437del2F617del2delTTt--t2212114-2116
ORF1ab/nsp2437F437XF617XnonsyntTTtAG210.52114-2116
ORF1ab/nsp2437F437XF617XnonsyntTTtGA210.52114-2116

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2437F437LttTttA797927All0.000152
ORF1ab/nsp2437F437LTttCtt115927All0.000022
ORF1ab/nsp2437F437LttTttG15927All0.000003
ORF1ab/nsp2437F437LttTttA486486AY.730.323353
ORF1ab/nsp2437F437FttTttC184184All0.000035
ORF1ab/nsp2437F437LttTttA7878AY.1020.002068
ORF1ab/nsp2437F437LttTttA6464AY.900.043806
ORF1ab/nsp2437F437VTttGtt5758All0.000011
ORF1ab/nsp2437F437VTtTGtA158All0
ORF1ab/nsp2437F437FttTttC5353B.1.1.70.000047
ORF1ab/nsp2437F437delTTT---4646All0.000009
ORF1ab/nsp2437F437LTttCtt2644B.1.1.70.000023
ORF1ab/nsp2437F437LttTttA1544B.1.1.70.000013
ORF1ab/nsp2437F437LttTttG344B.1.1.70.000003
ORF1ab/nsp2437F437LttTttA3844B.1.617.20.000143
ORF1ab/nsp2437F437LTttCtt444B.1.617.20.000015
ORF1ab/nsp2437F437LttTttG244B.1.617.20.000008
ORF1ab/nsp2437F437VTttGtt2424AY.1030.000149
ORF1ab/nsp2437F437ITttAtt2121All0.000004
ORF1ab/nsp2437F437LttTttA1121AY.440.000067
ORF1ab/nsp2437F437LTttCtt1021AY.440.000061
ORF1ab/nsp2437F437LttTttA2121B.511
ORF1ab/nsp2437F437CtTttGt1919All0.000004
ORF1ab/nsp2437F437StTttCt1617All0.000003
ORF1ab/nsp2437F437StTTtCC117All0
ORF1ab/nsp2437F437LttTttA1317AY.1030.000081
ORF1ab/nsp2437F437LTttCtt317AY.1030.000019
ORF1ab/nsp2437F437LttTttG117AY.1030.000006
ORF1ab/nsp2437F437CtTttGt1717B.1.1.70.000015
ORF1ab/nsp2437F437FttTttC1515AY.40.000023
ORF1ab/nsp2437F437FttTttC1414AY.1060.004689
ORF1ab/nsp2437F437FttTttC1313B.1.4290.000306
ORF1ab/nsp2437F437FttTttC1313B.1.6210.001151
ORF1ab/nsp2437F437LttTttA612AY.430.000027
ORF1ab/nsp2437F437LTttCtt612AY.430.000027
ORF1ab/nsp2437F437LTttCtt810AY.1200.000297
ORF1ab/nsp2437F437LttTttA210AY.1200.000074
ORF1ab/nsp2437F437FttTttC1010AY.560.016051
ORF1ab/nsp2437F437LTttCtt910B.10.000082
ORF1ab/nsp2437F437LttTttG110B.10.000009
ORF1ab/nsp2437F437VTttGtt1010B.1.10.000181
ORF1ab/nsp2437F437LttTttA88AY.46.40.001316
ORF1ab/nsp2437F437del1Ttt-tt67All0.000001
ORF1ab/nsp2437F437del1ttTtt-17All0
ORF1ab/nsp2437F437VTttGtt77AY.340.000679
ORF1ab/nsp2437F437FttTttC77B.1.617.20.000026
ORF1ab/nsp2437F437delTTT---66AY.250.000036
ORF1ab/nsp2437F437LTttCtt46AY.30.00004
ORF1ab/nsp2437F437LttTttA26AY.30.00002
ORF1ab/nsp2437F437LTttCtt46AY.40.000006
ORF1ab/nsp2437F437LttTttA16AY.40.000002
ORF1ab/nsp2437F437LttTttG16AY.40.000002
ORF1ab/nsp2437F437LttTttA56AY.460.00052
ORF1ab/nsp2437F437LTttCtt16AY.460.000104
ORF1ab/nsp2437F437delTTT---66B.1.1.70.000005
ORF1ab/nsp2437F437ITttAtt66B.1.1.70.000005
ORF1ab/nsp2437F437ITttAtt55AY.390.000124
ORF1ab/nsp2437F437LttTttG35B.1.10.000054
ORF1ab/nsp2437F437LttTttA25B.1.10.000036
ORF1ab/nsp2437F437LttTttA55P.10.000079
ORF1ab/nsp2437F437YtTttAt44All0.000001
ORF1ab/nsp2437F437LttTttA44AY.390.000099
ORF1ab/nsp2437F437FttTttC44AY.420.000161
ORF1ab/nsp2437F437FttTttC44AY.610.000419
ORF1ab/nsp2437F437delTTT---44B.10.000037
ORF1ab/nsp2437F437LttTttA44B.1.1.2410.008282
ORF1ab/nsp2437F437FttTttC44B.1.1.5190.000159
ORF1ab/nsp2437F437ITttAtt44B.1.617.20.000015
ORF1ab/nsp2437F437FttTttC33AY.1030.000019
ORF1ab/nsp2437F437LTttCtt33AY.1130.000427
ORF1ab/nsp2437F437VTttGtt33AY.390.000074
ORF1ab/nsp2437F437LttTttA33AY.420.000121
ORF1ab/nsp2437F437FttTttC33AY.430.000013
ORF1ab/nsp2437F437LttTttA33AY.50.000062
ORF1ab/nsp2437F437LTttCtt33B.1.1.1530.003286
ORF1ab/nsp2437F437LTttCtt33B.1.1.260.015707
ORF1ab/nsp2437F437delTTT---33B.1.1.330.001263
ORF1ab/nsp2437F437LTttCtt33B.1.2580.0002
ORF1ab/nsp2437F437LTttCtt23B.1.5260.000047
ORF1ab/nsp2437F437LttTttA13B.1.5260.000024
ORF1ab/nsp2437F437FttTttC33P.10.000047
ORF1ab/nsp2437F437FttTttC33P.20.00056
ORF1ab/nsp2437F437LTttCtt220.111111
ORF1ab/nsp2437F437del2TTt--t22All0
ORF1ab/nsp2437F437XtTTtAG12All0
ORF1ab/nsp2437F437XtTTtGA12All0
ORF1ab/nsp2437F437FttTttC22AY.1020.000053
ORF1ab/nsp2437F437LttTttA22AY.1170.000169
ORF1ab/nsp2437F437FttTttC22AY.200.000078
ORF1ab/nsp2437F437FttTttC22AY.250.000012
ORF1ab/nsp2437F437VTttGtt22AY.250.000012
ORF1ab/nsp2437F437LTttCtt12AY.250.000006
ORF1ab/nsp2437F437LttTttA12AY.250.000006
ORF1ab/nsp2437F437LttTttA22AY.34.10.00102
ORF1ab/nsp2437F437FttTttC22AY.390.000049
ORF1ab/nsp2437F437FttTttC22AY.4.20.000043
ORF1ab/nsp2437F437StTttCt22AY.430.000009
ORF1ab/nsp2437F437LTttCtt12AY.99.20.000092
ORF1ab/nsp2437F437LttTttA12AY.99.20.000092
ORF1ab/nsp2437F437FttTttC22B.10.000018
ORF1ab/nsp2437F437StTttCt22B.10.000018
ORF1ab/nsp2437F437delTTT---22B.1.10.000036
ORF1ab/nsp2437F437delTTT---22B.1.1.3480.001592
ORF1ab/nsp2437F437del1Ttt-tt22B.1.1.70.000002
ORF1ab/nsp2437F437FttTttC22B.1.1770.000026
ORF1ab/nsp2437F437LTttCtt22B.1.1770.000026
ORF1ab/nsp2437F437FttTttC22B.1.20.000018
ORF1ab/nsp2437F437FttTttC22B.1.2430.000139
ORF1ab/nsp2437F437LttTttA22B.1.3510.000059
ORF1ab/nsp2437F437VTttGtt22B.1.4040.002604
ORF1ab/nsp2437F437delTTT---22B.1.4240.016129
ORF1ab/nsp2437F437delTTT---22B.1.4290.000047
ORF1ab/nsp2437F437VTttGtt22B.1.617.20.000008
ORF1ab/nsp2437F437StTTtCC12B.1.617.20.000004
ORF1ab/nsp2437F437StTttCt12B.1.617.20.000004
ORF1ab/nsp2437F437delTTT---22N.60.014184
ORF1ab/nsp2437F437delTTT---22P.10.000032
ORF1ab/nsp2437F437FttTttC22P.1.120.000968
ORF1ab/nsp2437F437LttTttG22P.1.130.001797
ORF1ab/nsp2437F437delTTT---22P.20.000373
ORF1ab/nsp2437F437VTttGtt110.055556
ORF1ab/nsp2437F437YtTttAt11A.20.000662
ORF1ab/nsp2437F437LTttCtt11AY.1110.000183
ORF1ab/nsp2437F437FttTttC11AY.1190.000035
ORF1ab/nsp2437F437LTttCtt11AY.1190.000035
ORF1ab/nsp2437F437ITttAtt11AY.1200.000037
ORF1ab/nsp2437F437del2TTt--t11AY.1200.000037
ORF1ab/nsp2437F437FttTttC11AY.1200.000037
ORF1ab/nsp2437F437LTttCtt11AY.1210.000135
ORF1ab/nsp2437F437StTttCt11AY.130.000161
ORF1ab/nsp2437F437LTttCtt11AY.230.00007
ORF1ab/nsp2437F437LTttCtt11AY.240.000431
ORF1ab/nsp2437F437StTttCt11AY.250.000006
ORF1ab/nsp2437F437LTttCtt11AY.290.000016
ORF1ab/nsp2437F437ITttAtt11AY.330.000067
ORF1ab/nsp2437F437LttTttA11AY.380.000499
ORF1ab/nsp2437F437delTTT---11AY.40.000002
ORF1ab/nsp2437F437VTttGtt11AY.40.000002
ORF1ab/nsp2437F437CtTttGt11AY.4.50.000107
ORF1ab/nsp2437F437delTTT---11AY.4.50.000107
ORF1ab/nsp2437F437LttTttA11AY.410.000294
ORF1ab/nsp2437F437StTttCt11AY.420.00004
ORF1ab/nsp2437F437delTTT---11AY.430.000004
ORF1ab/nsp2437F437ITttAtt11AY.430.000004
ORF1ab/nsp2437F437del2TTt--t11AY.440.000006
ORF1ab/nsp2437F437StTttCt11AY.440.000006
ORF1ab/nsp2437F437FttTttC11AY.440.000006
ORF1ab/nsp2437F437VTttGtt11AY.46.60.000072
ORF1ab/nsp2437F437LTttCtt11AY.470.000031
ORF1ab/nsp2437F437FttTttC11AY.50.000021
ORF1ab/nsp2437F437VTttGtt11AY.50.000021
ORF1ab/nsp2437F437ITttAtt11AY.5.30.000337
ORF1ab/nsp2437F437delTTT---11AY.540.000095
ORF1ab/nsp2437F437LttTttA11AY.580.000907
ORF1ab/nsp2437F437ITttAtt11AY.60.000041
ORF1ab/nsp2437F437LttTttA11AY.60.000041
ORF1ab/nsp2437F437XtTTtGA11AY.600.000938
ORF1ab/nsp2437F437LTttCtt11AY.7.20.000559
ORF1ab/nsp2437F437VTttGtt11AY.750.000056
ORF1ab/nsp2437F437LttTttA11AY.840.000437
ORF1ab/nsp2437F437LTttCtt11AY.850.000427
ORF1ab/nsp2437F437LttTttA11AY.920.000287
ORF1ab/nsp2437F437LTttCtt11AY.980.000079
ORF1ab/nsp2437F437FttTttC11AY.98.10.000048
ORF1ab/nsp2437F437del1ttTtt-11B0.000128
ORF1ab/nsp2437F437LttTttA11B0.000128
ORF1ab/nsp2437F437XtTTtAG11B.10.000009
ORF1ab/nsp2437F437del1Ttt-tt11B.10.000009
ORF1ab/nsp2437F437VTttGtt11B.10.000009
ORF1ab/nsp2437F437YtTttAt11B.10.000009
ORF1ab/nsp2437F437StTttCt11B.1.10.000018
ORF1ab/nsp2437F437LttTttA11B.1.1.1230.017857
ORF1ab/nsp2437F437FttTttC11B.1.1.1530.001095
ORF1ab/nsp2437F437LTttCtt11B.1.1.250.000569
ORF1ab/nsp2437F437LttTttG11B.1.1.280.000311
ORF1ab/nsp2437F437LttTttA11B.1.1.3480.000796
ORF1ab/nsp2437F437StTttCt11B.1.1.3480.000796
ORF1ab/nsp2437F437delTTT---11B.1.1.4160.000905
ORF1ab/nsp2437F437del1Ttt-tt11B.1.1.4160.000905
ORF1ab/nsp2437F437LttTttA11B.1.1.5190.00004
ORF1ab/nsp2437F437VTttGtt11B.1.1.70.000001
ORF1ab/nsp2437F437LTttCtt11B.1.1.700.000341
ORF1ab/nsp2437F437LTttCtt11B.1.110.30.000718
ORF1ab/nsp2437F437LttTttA11B.1.1260.001276
ORF1ab/nsp2437F437LttTttA11B.1.130.002375
ORF1ab/nsp2437F437LTttCtt11B.1.160.90.007194
ORF1ab/nsp2437F437YtTttAt11B.1.1770.000013
ORF1ab/nsp2437F437LTttCtt11B.1.177.150.000631
ORF1ab/nsp2437F437LTttCtt11B.1.177.560.000668
ORF1ab/nsp2437F437FttTttC11B.1.177.810.000189
ORF1ab/nsp2437F437delTTT---11B.1.177.830.001481
ORF1ab/nsp2437F437delTTT---11B.1.1790.003759
ORF1ab/nsp2437F437LttTttA11B.1.1890.004292
ORF1ab/nsp2437F437ITttAtt11B.1.20.000009
ORF1ab/nsp2437F437YtTttAt11B.1.20.000009
ORF1ab/nsp2437F437LttTttA11B.1.20.000009
ORF1ab/nsp2437F437FttTttC11B.1.2210.000071
ORF1ab/nsp2437F437LttTttA11B.1.2210.000071
ORF1ab/nsp2437F437LttTttG11B.1.2340.000132
ORF1ab/nsp2437F437delTTT---11B.1.2340.000132
ORF1ab/nsp2437F437del1Ttt-tt11B.1.2340.000132
ORF1ab/nsp2437F437FttTttC11B.1.2340.000132
ORF1ab/nsp2437F437FttTttC11B.1.2580.000067
ORF1ab/nsp2437F437FttTttC11B.1.2890.00266
ORF1ab/nsp2437F437VTtTGtA11B.1.3320.003497
ORF1ab/nsp2437F437FttTttC11B.1.3510.00003
ORF1ab/nsp2437F437LTttCtt11B.1.4000.000429
ORF1ab/nsp2437F437StTttCt11B.1.4590.004082
ORF1ab/nsp2437F437StTttCt11B.1.5260.000024
ORF1ab/nsp2437F437StTttCt11B.1.5340.0125
ORF1ab/nsp2437F437delTTT---11B.1.5610.000397
ORF1ab/nsp2437F437delTTT---11B.1.617.20.000004
ORF1ab/nsp2437F437del1Ttt-tt11B.1.617.20.000004
ORF1ab/nsp2437F437LTttCtt11B.1.6280.000352
ORF1ab/nsp2437F437FttTttC11B.1.6330.041667
ORF1ab/nsp2437F437CtTttGt11B.550.00295
ORF1ab/nsp2437F437LttTttA11B.550.00295
ORF1ab/nsp2437F437delTTT---11B.570.015152
ORF1ab/nsp2437F437delTTT---11C.360.000911
ORF1ab/nsp2437F437FttTttC11C.370.000116
ORF1ab/nsp2437F437LTttCtt11D.20.000075
ORF1ab/nsp2437F437StTttCt11N.40.004255
ORF1ab/nsp2437F437StTttCt11N.60.007092
ORF1ab/nsp2437F437LttTttA11P.1.70.000319
ORF1ab/nsp2437F437delTTT---11Q.20.000613
ORF1ab/nsp2437F437LTttCtt11R.10.00009
ORF1ab/nsp2437F437FttTttC11R.10.00009