CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 436

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2436I436II616IsynatCatT795378320.9847862111-2113
ORF1ab/nsp2436I436II616IsynatCatA79531210.01521442111-2113
ORF1ab/nsp2436I436VI616VnonsynAtcGtc7997960.9962452111-2113
ORF1ab/nsp2436I436VI616VnonsynAtCGtT79920.002503132111-2113
ORF1ab/nsp2436I436VI616VnonsynAtCGtG79910.001251562111-2113
ORF1ab/nsp2436I436TI616TnonsynaTcaCc3483440.9885062111-2113
ORF1ab/nsp2436I436TI616TnonsynaTCaCA34830.008620692111-2113
ORF1ab/nsp2436I436TI616TnonsynaTCaCT34810.002873562111-2113
ORF1ab/nsp2436I436delI616deldelATC---474712111-2113
ORF1ab/nsp2436I436MI616MnonsynatCatG151512111-2113
ORF1ab/nsp2436I436FI616FnonsynAtcTtc111112111-2113
ORF1ab/nsp2436I436LI616LnonsynAtcCtc1060.62111-2113
ORF1ab/nsp2436I436LI616LnonsynAtCCtG1020.22111-2113
ORF1ab/nsp2436I436LI616LnonsynAtCCtT1010.12111-2113
ORF1ab/nsp2436I436LI616LnonsynAtCTtG1010.12111-2113
ORF1ab/nsp2436I436SI616SnonsynaTcaGc9912111-2113
ORF1ab/nsp2436I436NI616NnonsynaTcaAc540.82111-2113
ORF1ab/nsp2436I436NI616NnonsynaTCaAT510.22111-2113
ORF1ab/nsp2436I436HI616HnonsynATCCAT430.752111-2113
ORF1ab/nsp2436I436HI616HnonsynATcCAc410.252111-2113
ORF1ab/nsp2436I436RI616RnonsynATCCGG310.3333332111-2113
ORF1ab/nsp2436I436RI616RnonsynATcCGc310.3333332111-2113
ORF1ab/nsp2436I436RI616RnonsynaTCaGG310.3333332111-2113
ORF1ab/nsp2436I436EI616EnonsynATCGAG2212111-2113
ORF1ab/nsp2436I436CI616CnonsynATcTGc1112111-2113
ORF1ab/nsp2436I436DI616DnonsynATcGAc1112111-2113
ORF1ab/nsp2436I436KI616KnonsynaTCaAG1112111-2113
ORF1ab/nsp2436I436del1I616del1delatCat-1112111-2113
ORF1ab/nsp2436I436WI616WnonsynATCTGG1112111-2113

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2436I436IatCatT78327953All0.001498
ORF1ab/nsp2436I436IatCatA1217953All0.000023
ORF1ab/nsp2436I436IatCatT11961235AY.40.001861
ORF1ab/nsp2436I436IatCatA391235AY.40.000061
ORF1ab/nsp2436I436IatCatT964964AY.50.019906
ORF1ab/nsp2436I436VAtcGtc796799All0.000152
ORF1ab/nsp2436I436VAtCGtT2799All0
ORF1ab/nsp2436I436VAtCGtG1799All0
ORF1ab/nsp2436I436IatCatT760762B.1.20.006692
ORF1ab/nsp2436I436IatCatA2762B.1.20.000018
ORF1ab/nsp2436I436IatCatT696706B.1.1.70.000623
ORF1ab/nsp2436I436IatCatA10706B.1.1.70.000009
ORF1ab/nsp2436I436VAtcGtc665666B.1.1.70.000595
ORF1ab/nsp2436I436VAtCGtT1666B.1.1.70.000001
ORF1ab/nsp2436I436TaTcaCc344348All0.000066
ORF1ab/nsp2436I436TaTCaCA3348All0.000001
ORF1ab/nsp2436I436TaTCaCT1348All0
ORF1ab/nsp2436I436IatCatT290292B.1.617.20.001092
ORF1ab/nsp2436I436IatCatA2292B.1.617.20.000008
ORF1ab/nsp2436I436IatCatT261284B.10.002391
ORF1ab/nsp2436I436IatCatA23284B.10.000211
ORF1ab/nsp2436I436IatCatT199199B.1.4290.004682
ORF1ab/nsp2436I436IatCatT164164AY.250.000986
ORF1ab/nsp2436I436IatCatT163163B.1.9.41
ORF1ab/nsp2436I436IatCatT162162B.1.91
ORF1ab/nsp2436I436IatCatT144152AY.440.000876
ORF1ab/nsp2436I436IatCatA8152AY.440.000049
ORF1ab/nsp2436I436IatCatT137139AY.430.000607
ORF1ab/nsp2436I436IatCatA2139AY.430.000009
ORF1ab/nsp2436I436IatCatT130130B.1.3240.208668
ORF1ab/nsp2436I436IatCatT124124AY.30.001233
ORF1ab/nsp2436I436IatCatT101107AY.1030.000627
ORF1ab/nsp2436I436IatCatA6107AY.1030.000037
ORF1ab/nsp2436I436IatCatT105105AY.540.010011
ORF1ab/nsp2436I436TaTcaCc9595AY.1030.00059
ORF1ab/nsp2436I436IatCatT7070B.1.4270.003535
ORF1ab/nsp2436I436IatCatT6969B.1.36.240.425926
ORF1ab/nsp2436I436IatCatT6868AY.39.10.002694
ORF1ab/nsp2436I436IatCatT6666AE.10.75
ORF1ab/nsp2436I436IatCatT6262P.10.000977
ORF1ab/nsp2436I436IatCatT6161AY.260.001727
ORF1ab/nsp2436I436IatCatT6161C.370.00708
ORF1ab/nsp2436I436IatCatT5959AY.7.10.006649
ORF1ab/nsp2436I436IatCatT5858B.1.1.2310.179567
ORF1ab/nsp2436I436IatCatT5153B.1.10.000925
ORF1ab/nsp2436I436IatCatA253B.1.10.000036
ORF1ab/nsp2436I436IatCatT5050B.1.5960.004357
ORF1ab/nsp2436I436IatCatT4848AY.940.021248
ORF1ab/nsp2436I436delATC---4747All0.000009
ORF1ab/nsp2436I436TaTcaCc4747AY.440.000286
ORF1ab/nsp2436I436IatCatT4545AY.98.10.002179
ORF1ab/nsp2436I436IatCatT4242B.1.1770.000553
ORF1ab/nsp2436I436IatCatT4141B.1.1.500.027834
ORF1ab/nsp2436I436IatCatT3737B.1.1.3010.043632
ORF1ab/nsp2436I436IatCatT3737B.1.177.810.007005
ORF1ab/nsp2436I436IatCatT3636AY.330.002404
ORF1ab/nsp2436I436IatCatT3636AY.450.004381
ORF1ab/nsp2436I436TaTcaCc3435AY.40.000053
ORF1ab/nsp2436I436TaTCaCT135AY.40.000002
ORF1ab/nsp2436I436IatCatT3535AY.46.60.002527
ORF1ab/nsp2436I436IatCatT3333B.4.60.55
ORF1ab/nsp2436I436IatCatT3131B.1.9.11
ORF1ab/nsp2436I436IatCatT3030AY.1180.001879
ORF1ab/nsp2436I436IatCatT2828AY.1190.000989
ORF1ab/nsp2436I436IatCatT2828AY.5.40.007748
ORF1ab/nsp2436I436IatCatT2828B.1.3510.000832
ORF1ab/nsp2436I436IatCatT2626B.1.1.4511
ORF1ab/nsp2436I436IatCatT2626B.1.9.31
ORF1ab/nsp2436I436IatCatT2424AY.750.001345
ORF1ab/nsp2436I436VAtcGtc2324B.1.617.20.000087
ORF1ab/nsp2436I436VAtCGtG124B.1.617.20.000004
ORF1ab/nsp2436I436IatCatT2223B.1.438.10.00236
ORF1ab/nsp2436I436IatCatA123B.1.438.10.000107
ORF1ab/nsp2436I436IatCatT2222B.1.1600.000686
ORF1ab/nsp2436I436IatCatT2021AY.1020.00053
ORF1ab/nsp2436I436IatCatA121AY.1020.000027
ORF1ab/nsp2436I436TaTcaCc2020B.1.1.70.000018
ORF1ab/nsp2436I436IatCatT1919P.1.170.003073
ORF1ab/nsp2436I436IatCatT1818AY.1000.000828
ORF1ab/nsp2436I436IatCatT1818AY.200.0007
ORF1ab/nsp2436I436IatCatT1618AY.290.000252
ORF1ab/nsp2436I436IatCatA218AY.290.000032
ORF1ab/nsp2436I436IatCatT1818B.1.1.2740.090909
ORF1ab/nsp2436I436IatCatT1818B.1.2430.001253
ORF1ab/nsp2436I436TaTcaCc1818P.1.140.00086
ORF1ab/nsp2436I436VAtcGtc1717B.1.4290.0004
ORF1ab/nsp2436I436IatCatT1616AY.16.10.007519
ORF1ab/nsp2436I436TaTcaCc1616AY.250.000096
ORF1ab/nsp2436I436MatCatG1515All0.000003
ORF1ab/nsp2436I436IatCatT1515AY.4.20.000325
ORF1ab/nsp2436I436IatCatT1414AY.470.000435
ORF1ab/nsp2436I436IatCatT814B.1.1.2220.001632
ORF1ab/nsp2436I436IatCatA614B.1.1.2220.001224
ORF1ab/nsp2436I436IatCatT1214D.20.0009
ORF1ab/nsp2436I436IatCatA214D.20.00015
ORF1ab/nsp2436I436IatCatT1313AY.930.00355
ORF1ab/nsp2436I436VAtcGtc1212AY.1020.000318
ORF1ab/nsp2436I436VAtcGtc1212AY.440.000073
ORF1ab/nsp2436I436IatCatT1112B.1.1.5190.000437
ORF1ab/nsp2436I436IatCatA112B.1.1.5190.00004
ORF1ab/nsp2436I436IatCatT1212B.1.2210.000852
ORF1ab/nsp2436I436IatCatT1212B.1.6250.028235
ORF1ab/nsp2436I436FAtcTtc1111All0.000002
ORF1ab/nsp2436I436IatCatT1111AY.420.000443
ORF1ab/nsp2436I436IatCatT1111AY.610.001153
ORF1ab/nsp2436I436IatCatT1111AY.99.20.001014
ORF1ab/nsp2436I436MatCatG1111B.1.1.70.00001
ORF1ab/nsp2436I436IatCatT1111B.1.110.30.007902
ORF1ab/nsp2436I436IatCatT1111B.1.177.330.018092
ORF1ab/nsp2436I436IatCatT1111B.1.177.830.016296
ORF1ab/nsp2436I436LAtcCtc610All0.000001
ORF1ab/nsp2436I436LAtCCtG210All0
ORF1ab/nsp2436I436LAtCCtT110All0
ORF1ab/nsp2436I436LAtCTtG110All0
ORF1ab/nsp2436I436IatCatT1010AY.1200.000372
ORF1ab/nsp2436I436IatCatT1010AY.230.000697
ORF1ab/nsp2436I436IatCatT1010AY.46.40.001645
ORF1ab/nsp2436I436IatCatT1010B.1.177.570.00281
ORF1ab/nsp2436I436TaTcaCc1010B.1.5610.00397
ORF1ab/nsp2436I436IatCatT1010B.1.9.21
ORF1ab/nsp2436I436SaTcaGc99All0.000002
ORF1ab/nsp2436I436IatCatT99AY.160.003417
ORF1ab/nsp2436I436IatCatT99AY.390.000222
ORF1ab/nsp2436I436VAtcGtc99AY.40.000014
ORF1ab/nsp2436I436IatCatT89B0.001022
ORF1ab/nsp2436I436IatCatA19B0.000128
ORF1ab/nsp2436I436IatCatT99B.1.177.600.001966
ORF1ab/nsp2436I436IatCatT99B.1.5260.000212
ORF1ab/nsp2436I436TaTcaCc99B.1.6190.00784
ORF1ab/nsp2436I436IatCatT99P.1.140.00043
ORF1ab/nsp2436I436IatCatT88AY.1170.000676
ORF1ab/nsp2436I436IatCatT78AY.60.000288
ORF1ab/nsp2436I436IatCatA18AY.60.000041
ORF1ab/nsp2436I436IatCatT88B.1.1.2140.000444
ORF1ab/nsp2436I436IatCatT88B.1.1.5210.042781
ORF1ab/nsp2436I436TaTcaCc88B.1.20.00007
ORF1ab/nsp2436I436IatCatT88B.1.2580.000532
ORF1ab/nsp2436I436IatCatT88B.1.360.001167
ORF1ab/nsp2436I436IatCatT88B.1.4000.003432
ORF1ab/nsp2436I436VAtcGtc88P.20.001493
ORF1ab/nsp2436I436LAtcCtc370.166667
ORF1ab/nsp2436I436LAtCCtG270.111111
ORF1ab/nsp2436I436LAtCTtG170.055556
ORF1ab/nsp2436I436LAtCCtT170.055556
ORF1ab/nsp2436I436VAtcGtc77AY.1030.000043
ORF1ab/nsp2436I436IatCatT77AY.670.00325
ORF1ab/nsp2436I436IatCatT77AY.980.000553
ORF1ab/nsp2436I436IatCatT77B.1.5170.002989
ORF1ab/nsp2436I436TaTcaCc77B.1.617.20.000026
ORF1ab/nsp2436I436IatCatT66AY.23.10.002504
ORF1ab/nsp2436I436delATC---66AY.250.000036
ORF1ab/nsp2436I436IatCatT66AY.520.004886
ORF1ab/nsp2436I436IatCatT66AY.9.10.000502
ORF1ab/nsp2436I436IatCatT66AY.910.004383
ORF1ab/nsp2436I436IatCatT66B.1.1.120.044776
ORF1ab/nsp2436I436IatCatT66B.1.1.630.002315
ORF1ab/nsp2436I436TaTcaCc66B.1.1600.000187
ORF1ab/nsp2436I436IatCatT66B.1.177.210.000459
ORF1ab/nsp2436I436NaTcaAc45All0.000001
ORF1ab/nsp2436I436NaTCaAT15All0
ORF1ab/nsp2436I436IatCatT55AY.1210.000677
ORF1ab/nsp2436I436IatCatT55AY.270.000324
ORF1ab/nsp2436I436IatCatT55AY.410.00147
ORF1ab/nsp2436I436IatCatT55AY.710.002375
ORF1ab/nsp2436I436IatCatT55AY.9.20.000184
ORF1ab/nsp2436I436TaTcaCc55B.1.10.000091
ORF1ab/nsp2436I436IatCatT55B.1.1.280.001556
ORF1ab/nsp2436I436IatCatT55B.1.1.330.002104
ORF1ab/nsp2436I436delATC---55B.1.1.70.000004
ORF1ab/nsp2436I436IatCatT55B.1.177.690.007418
ORF1ab/nsp2436I436IatCatT55B.1.2340.00066
ORF1ab/nsp2436I436IatCatT55B.1.3890.00501
ORF1ab/nsp2436I436IatCatT55B.1.4160.006345
ORF1ab/nsp2436I436IatCatT55B.1.5650.004052
ORF1ab/nsp2436I436IatCatT55B.1.6210.000443
ORF1ab/nsp2436I436TaTcaCc55P.10.000079
ORF1ab/nsp2436I436IatCatT55Q.80.000825
ORF1ab/nsp2436I436HATCCAT34All0.000001
ORF1ab/nsp2436I436HATcCAc14All0
ORF1ab/nsp2436I436TaTcaCc44AY.1070.001864
ORF1ab/nsp2436I436TaTcaCc44AY.1200.000149
ORF1ab/nsp2436I436IatCatT44AY.29.10.000882
ORF1ab/nsp2436I436IatCatT34AY.360.000445
ORF1ab/nsp2436I436IatCatA14AY.360.000148
ORF1ab/nsp2436I436VAtcGtc44AY.430.000018
ORF1ab/nsp2436I436IatCatT44AY.70.000784
ORF1ab/nsp2436I436IatCatT44AY.75.10.000721
ORF1ab/nsp2436I436IatCatT44AY.830.006897
ORF1ab/nsp2436I436IatCatT44AZ.20.003284
ORF1ab/nsp2436I436delATC---44B.10.000037
ORF1ab/nsp2436I436TaTcaCc44B.10.000037
ORF1ab/nsp2436I436TaTcaCc44B.1.1.2220.000816
ORF1ab/nsp2436I436IatCatT44B.1.1.3260.007042
ORF1ab/nsp2436I436IatCatT44B.1.160.200.035714
ORF1ab/nsp2436I436IatCatT44B.1.177.860.000734
ORF1ab/nsp2436I436TaTcaCc44B.1.2210.000284
ORF1ab/nsp2436I436IatCatT44B.1.4250.011976
ORF1ab/nsp2436I436IatCatT44B.1.4780.047059
ORF1ab/nsp2436I436IatCatT44Q.10.000505
ORF1ab/nsp2436I436RaTCaGG130.055556
ORF1ab/nsp2436I436RATcCGc130.055556
ORF1ab/nsp2436I436RATCCGG130.055556
ORF1ab/nsp2436I436RaTCaGG13All0
ORF1ab/nsp2436I436RATcCGc13All0
ORF1ab/nsp2436I436RATCCGG13All0
ORF1ab/nsp2436I436IatCatT33AY.1050.001929
ORF1ab/nsp2436I436IatCatT33AY.1080.003308
ORF1ab/nsp2436I436IatCatT33AY.1090.002219
ORF1ab/nsp2436I436IatCatT33AY.120.10.000963
ORF1ab/nsp2436I436IatCatT33AY.3.10.000256
ORF1ab/nsp2436I436IatCatT33AY.320.001597
ORF1ab/nsp2436I436IatCatT33AY.510.002727
ORF1ab/nsp2436I436TaTcaCc23AY.60.000082
ORF1ab/nsp2436I436TaTCaCA13AY.60.000041
ORF1ab/nsp2436I436VAtcGtc33AY.650.001599
ORF1ab/nsp2436I436IatCatT33AY.760.014493
ORF1ab/nsp2436I436IatCatT33AY.850.001282
ORF1ab/nsp2436I436IatCatT33AY.880.002653
ORF1ab/nsp2436I436TaTcaCc33AY.98.10.000145
ORF1ab/nsp2436I436IatCatT33AY.99.10.004658
ORF1ab/nsp2436I436VAtcGtc33B.10.000027
ORF1ab/nsp2436I436IatCatT33B.1.1.1810.013636
ORF1ab/nsp2436I436IatCatT33B.1.1.2940.003797
ORF1ab/nsp2436I436delATC---33B.1.1.330.001263
ORF1ab/nsp2436I436IatCatT33B.1.1.4020.033333
ORF1ab/nsp2436I436IatCatT33B.1.1.4340.001046
ORF1ab/nsp2436I436TaTcaCc33B.1.1770.00004
ORF1ab/nsp2436I436IatCatT33B.1.177.120.000455
ORF1ab/nsp2436I436IatCatT33B.1.177.70.000495
ORF1ab/nsp2436I436IatCatT33B.1.3490.002144
ORF1ab/nsp2436I436IatCatT33B.1.3990.005803
ORF1ab/nsp2436I436IatCatT33B.1.4450.035294
ORF1ab/nsp2436I436IatCatT33B.1.617.10.000387
ORF1ab/nsp2436I436IatCatT33P.1.150.000697
ORF1ab/nsp2436I436MatCatG220.111111
ORF1ab/nsp2436I436HATcCAc120.055556
ORF1ab/nsp2436I436HATCCAT120.055556
ORF1ab/nsp2436I436NaTcaAc120.055556
ORF1ab/nsp2436I436NaTCaAT120.055556
ORF1ab/nsp2436I436IatCatA12A0.000387
ORF1ab/nsp2436I436IatCatT12A0.000387
ORF1ab/nsp2436I436IatCatT22A.10.000564
ORF1ab/nsp2436I436IatCatT22A.20.001324
ORF1ab/nsp2436I436IatCatT22A.2.50.000998
ORF1ab/nsp2436I436IatCatT22A.2.5.10.009615
ORF1ab/nsp2436I436EATCGAG22All0
ORF1ab/nsp2436I436IatCatT22AY.1010.000981
ORF1ab/nsp2436I436LAtcCtc22AY.1030.000012
ORF1ab/nsp2436I436IatCatT22AY.1040.003968
ORF1ab/nsp2436I436IatCatT22AY.1060.00067
ORF1ab/nsp2436I436IatCatT22AY.1140.000462
ORF1ab/nsp2436I436IatCatT12AY.120.2.10.000498
ORF1ab/nsp2436I436IatCatA12AY.120.2.10.000498
ORF1ab/nsp2436I436IatCatT22AY.140.000176
ORF1ab/nsp2436I436SaTcaGc22AY.230.000139
ORF1ab/nsp2436I436IatCatT22AY.240.000862
ORF1ab/nsp2436I436VAtcGtc12AY.260.000028
ORF1ab/nsp2436I436VAtCGtT12AY.260.000028
ORF1ab/nsp2436I436IatCatT22AY.340.000194
ORF1ab/nsp2436I436IatCatA12AY.350.000233
ORF1ab/nsp2436I436IatCatT12AY.350.000233
ORF1ab/nsp2436I436FAtcTtc22AY.40.000003
ORF1ab/nsp2436I436TaTcaCc22AY.4.20.000043
ORF1ab/nsp2436I436IatCatA12AY.4.50.000107
ORF1ab/nsp2436I436IatCatT12AY.4.50.000107
ORF1ab/nsp2436I436IatCatT22AY.460.000208
ORF1ab/nsp2436I436IatCatA12AY.46.20.000635
ORF1ab/nsp2436I436IatCatT12AY.46.20.000635
ORF1ab/nsp2436I436IatCatA22AY.46.30.001867
ORF1ab/nsp2436I436IatCatT22AY.570.001312
ORF1ab/nsp2436I436IatCatT22AY.650.001066
ORF1ab/nsp2436I436IatCatT22AY.700.000417
ORF1ab/nsp2436I436IatCatT22AY.720.002721
ORF1ab/nsp2436I436IatCatT22AY.740.000231
ORF1ab/nsp2436I436VAtcGtc22AY.750.000112
ORF1ab/nsp2436I436IatCatA12AY.90.000068
ORF1ab/nsp2436I436IatCatT12AY.90.000068
ORF1ab/nsp2436I436VAtcGtc22AY.920.000575
ORF1ab/nsp2436I436VAtcGtc22AY.98.10.000097
ORF1ab/nsp2436I436delATC---22B.1.10.000036
ORF1ab/nsp2436I436IatCatT22B.1.1.10.000653
ORF1ab/nsp2436I436IatCatT22B.1.1.1570.001826
ORF1ab/nsp2436I436VAtcGtc22B.1.1.280.000622
ORF1ab/nsp2436I436IatCatT22B.1.1.2840.000215
ORF1ab/nsp2436I436IatCatT22B.1.1.3060.000877
ORF1ab/nsp2436I436IatCatT22B.1.1.3180.000604
ORF1ab/nsp2436I436delATC---22B.1.1.3480.001592
ORF1ab/nsp2436I436IatCatT22B.1.1.3540.008772
ORF1ab/nsp2436I436IatCatT22B.1.1.390.001019
ORF1ab/nsp2436I436IatCatT22B.1.1.4200.002012
ORF1ab/nsp2436I436TaTcaCc22B.1.160.290.008439
ORF1ab/nsp2436I436IatCatT22B.1.1630.04878
ORF1ab/nsp2436I436IatCatT22B.1.177.180.00232
ORF1ab/nsp2436I436IatCatT22B.1.177.620.002384
ORF1ab/nsp2436I436IatCatT22B.1.177.730.001133
ORF1ab/nsp2436I436IatCatT22B.1.177.870.001456
ORF1ab/nsp2436I436IatCatT22B.1.1890.008584
ORF1ab/nsp2436I436IatCatT22B.1.2010.011364
ORF1ab/nsp2436I436IatCatT22B.1.2100.004264
ORF1ab/nsp2436I436IatCatT22B.1.2410.001623
ORF1ab/nsp2436I436TaTcaCc22B.1.2580.000133
ORF1ab/nsp2436I436IatCatA12B.1.258.170.000104
ORF1ab/nsp2436I436IatCatT12B.1.258.170.000104
ORF1ab/nsp2436I436VAtcGtc22B.1.3510.000059
ORF1ab/nsp2436I436IatCatT22B.1.351.20.000605
ORF1ab/nsp2436I436IatCatT22B.1.36.220.002415
ORF1ab/nsp2436I436TaTcaCc22B.1.36.80.002
ORF1ab/nsp2436I436IatCatT22B.1.36.80.002
ORF1ab/nsp2436I436delATC---22B.1.4240.016129
ORF1ab/nsp2436I436delATC---22B.1.4290.000047
ORF1ab/nsp2436I436IatCatT22B.1.5800.00813
ORF1ab/nsp2436I436IatCatT22B.1.617.30.00597
ORF1ab/nsp2436I436IatCatT22C.360.001821
ORF1ab/nsp2436I436delATC---22N.60.014184
ORF1ab/nsp2436I436delATC---22P.10.000032
ORF1ab/nsp2436I436VAtcGtc22P.10.000032
ORF1ab/nsp2436I436IatCatT22P.1.100.000539
ORF1ab/nsp2436I436delATC---22P.20.000373
ORF1ab/nsp2436I436WATCTGG110.055556
ORF1ab/nsp2436I436FAtcTtc110.055556
ORF1ab/nsp2436I436SaTcaGc110.055556
ORF1ab/nsp2436I436IatCatT110.055556
ORF1ab/nsp2436I436CATcTGc110.055556
ORF1ab/nsp2436I436DATcGAc11All0
ORF1ab/nsp2436I436CATcTGc11All0
ORF1ab/nsp2436I436WATCTGG11All0
ORF1ab/nsp2436I436KaTCaAG11All0
ORF1ab/nsp2436I436del1atCat-11All0
ORF1ab/nsp2436I436IatCatT11AU.10.001266
ORF1ab/nsp2436I436IatCatT11AY.100.00053
ORF1ab/nsp2436I436VAtcGtc11AY.1000.000046
ORF1ab/nsp2436I436NaTcaAc11AY.1020.000027
ORF1ab/nsp2436I436TaTcaCc11AY.1020.000027
ORF1ab/nsp2436I436FAtcTtc11AY.1060.000335
ORF1ab/nsp2436I436VAtcGtc11AY.1100.000113
ORF1ab/nsp2436I436VAtcGtc11AY.1110.000183
ORF1ab/nsp2436I436del1atCat-11AY.1130.000142
ORF1ab/nsp2436I436IatCatT11AY.1160.000287
ORF1ab/nsp2436I436IatCatT11AY.116.10.000311
ORF1ab/nsp2436I436TaTCaCA11AY.1180.000063
ORF1ab/nsp2436I436EATCGAG11AY.1190.000035
ORF1ab/nsp2436I436delATC---11AY.1200.000037
ORF1ab/nsp2436I436IatCatT11AY.130.000161
ORF1ab/nsp2436I436IatCatT11AY.20.000356
ORF1ab/nsp2436I436VAtcGtc11AY.200.000039
ORF1ab/nsp2436I436VAtcGtc11AY.230.00007
ORF1ab/nsp2436I436VAtcGtc11AY.250.000006
ORF1ab/nsp2436I436SaTcaGc11AY.250.000006
ORF1ab/nsp2436I436FAtcTtc11AY.260.000028
ORF1ab/nsp2436I436TaTcaCc11AY.260.000028
ORF1ab/nsp2436I436VAtcGtc11AY.30.00001
ORF1ab/nsp2436I436TaTcaCc11AY.30.00001
ORF1ab/nsp2436I436TaTcaCc11AY.330.000067
ORF1ab/nsp2436I436IatCatT11AY.34.10.00051
ORF1ab/nsp2436I436IatCatT11AY.370.000316
ORF1ab/nsp2436I436delATC---11AY.40.000002
ORF1ab/nsp2436I436IatCatT11AY.4.10.000737
ORF1ab/nsp2436I436TaTcaCc11AY.4.10.000737
ORF1ab/nsp2436I436FAtcTtc11AY.4.20.000022
ORF1ab/nsp2436I436IatCatT11AY.4.2.10.000149
ORF1ab/nsp2436I436TaTcaCc11AY.4.50.000107
ORF1ab/nsp2436I436delATC---11AY.4.50.000107
ORF1ab/nsp2436I436TaTcaCc11AY.430.000004
ORF1ab/nsp2436I436delATC---11AY.430.000004
ORF1ab/nsp2436I436SaTcaGc11AY.440.000006
ORF1ab/nsp2436I436VAtcGtc11AY.460.000104
ORF1ab/nsp2436I436IatCatT11AY.46.10.001027
ORF1ab/nsp2436I436IatCatT11AY.46.50.000198
ORF1ab/nsp2436I436TaTcaCc11AY.470.000031
ORF1ab/nsp2436I436IatCatT11AY.5.30.000337
ORF1ab/nsp2436I436delATC---11AY.540.000095
ORF1ab/nsp2436I436TaTcaCc11AY.570.000656
ORF1ab/nsp2436I436IatCatT11AY.580.000907
ORF1ab/nsp2436I436SaTcaGc11AY.600.000938
ORF1ab/nsp2436I436IatCatT11AY.640.000595
ORF1ab/nsp2436I436TaTcaCc11AY.680.000274
ORF1ab/nsp2436I436IatCatT11AY.690.000187
ORF1ab/nsp2436I436TaTcaCc11AY.7.20.000559
ORF1ab/nsp2436I436IatCatT11AY.730.000665
ORF1ab/nsp2436I436VAtcGtc11AY.740.000116
ORF1ab/nsp2436I436TaTcaCc11AY.740.000116
ORF1ab/nsp2436I436IatCatT11AY.770.001127
ORF1ab/nsp2436I436VAtcGtc11AY.80.000606
ORF1ab/nsp2436I436IatCatT11AY.840.000437
ORF1ab/nsp2436I436VAtcGtc11AY.890.004902
ORF1ab/nsp2436I436TaTcaCc11AY.910.00073
ORF1ab/nsp2436I436IatCatT11AZ.10.000867
ORF1ab/nsp2436I436IatCatT11AZ.50.003509
ORF1ab/nsp2436I436SaTcaGc11B.10.000009
ORF1ab/nsp2436I436FAtcTtc11B.10.000009
ORF1ab/nsp2436I436LAtcCtc11B.10.000009
ORF1ab/nsp2436I436VAtcGtc11B.1.10.000018
ORF1ab/nsp2436I436FAtcTtc11B.1.10.000018
ORF1ab/nsp2436I436IatCatT11B.1.1.1250.010204
ORF1ab/nsp2436I436VAtcGtc11B.1.1.1610.003534
ORF1ab/nsp2436I436TaTcaCc11B.1.1.1740.003378
ORF1ab/nsp2436I436IatCatT11B.1.1.2130.021739
ORF1ab/nsp2436I436VAtcGtc11B.1.1.2220.000204
ORF1ab/nsp2436I436IatCatT11B.1.1.2410.00207
ORF1ab/nsp2436I436IatCatT11B.1.1.2430.004082
ORF1ab/nsp2436I436IatCatT11B.1.1.250.000569
ORF1ab/nsp2436I436TaTcaCc11B.1.1.2580.003257
ORF1ab/nsp2436I436IatCatT11B.1.1.260.005236
ORF1ab/nsp2436I436IatCatT11B.1.1.2730.006757
ORF1ab/nsp2436I436TaTcaCc11B.1.1.2840.000107
ORF1ab/nsp2436I436IatCatT11B.1.1.30.008696
ORF1ab/nsp2436I436IatCatT11B.1.1.3020.002075
ORF1ab/nsp2436I436IatCatT11B.1.1.3070.002532
ORF1ab/nsp2436I436IatCatT11B.1.1.3110.000358
ORF1ab/nsp2436I436IatCatT11B.1.1.3160.000925
ORF1ab/nsp2436I436IatCatT11B.1.1.3170.000412
ORF1ab/nsp2436I436NaTcaAc11B.1.1.3260.001761
ORF1ab/nsp2436I436IatCatT11B.1.1.3370.003597
ORF1ab/nsp2436I436IatCatT11B.1.1.3480.000796
ORF1ab/nsp2436I436VAtcGtc11B.1.1.3480.000796
ORF1ab/nsp2436I436IatCatT11B.1.1.370.000193
ORF1ab/nsp2436I436IatCatT11B.1.1.3720.000689
ORF1ab/nsp2436I436SaTcaGc11B.1.1.3770.001381
ORF1ab/nsp2436I436IatCatT11B.1.1.3970.002252
ORF1ab/nsp2436I436IatCatT11B.1.1.4060.006494
ORF1ab/nsp2436I436TaTcaCc11B.1.1.4160.000905
ORF1ab/nsp2436I436delATC---11B.1.1.4160.000905
ORF1ab/nsp2436I436IatCatT11B.1.1.4370.010417
ORF1ab/nsp2436I436VAtcGtc11B.1.1.5190.00004
ORF1ab/nsp2436I436TaTcaCc11B.1.1.5190.00004
ORF1ab/nsp2436I436IatCatT11B.1.1.540.003021
ORF1ab/nsp2436I436IatCatT11B.1.1.700.000341
ORF1ab/nsp2436I436TaTcaCc11B.1.1.700.000341
ORF1ab/nsp2436I436HATCCAT11B.1.110.30.000718
ORF1ab/nsp2436I436IatCatT11B.1.1280.000635
ORF1ab/nsp2436I436IatCatT11B.1.1570.002985
ORF1ab/nsp2436I436TaTcaCc11B.1.160.140.002119
ORF1ab/nsp2436I436IatCatT11B.1.160.70.002079
ORF1ab/nsp2436I436IatCatT11B.1.177.110.001698
ORF1ab/nsp2436I436IatCatT11B.1.177.150.000631
ORF1ab/nsp2436I436IatCatT11B.1.177.160.000664
ORF1ab/nsp2436I436IatCatT11B.1.177.170.000821
ORF1ab/nsp2436I436delATC---11B.1.177.180.00116
ORF1ab/nsp2436I436IatCatT11B.1.177.440.000519
ORF1ab/nsp2436I436IatCatT11B.1.177.450.000381
ORF1ab/nsp2436I436IatCatT11B.1.177.540.000606
ORF1ab/nsp2436I436FAtcTtc11B.1.177.720.00339
ORF1ab/nsp2436I436IatCatT11B.1.177.750.001041
ORF1ab/nsp2436I436IatCatT11B.1.177.790.002342
ORF1ab/nsp2436I436TaTcaCc11B.1.177.800.001912
ORF1ab/nsp2436I436delATC---11B.1.177.830.001481
ORF1ab/nsp2436I436delATC---11B.1.1790.003759
ORF1ab/nsp2436I436IatCatT11B.1.2060.000816
ORF1ab/nsp2436I436IatCatT11B.1.2180.005155
ORF1ab/nsp2436I436IatCatT11B.1.2270.047619
ORF1ab/nsp2436I436delATC---11B.1.2340.000132
ORF1ab/nsp2436I436IatCatA11B.1.240.20.030303
ORF1ab/nsp2436I436SaTcaGc11B.1.2430.00007
ORF1ab/nsp2436I436IatCatT11B.1.243.10.022222
ORF1ab/nsp2436I436IatCatT11B.1.3190.003049
ORF1ab/nsp2436I436TaTcaCc11B.1.3320.003497
ORF1ab/nsp2436I436TaTcaCc11B.1.3510.00003
ORF1ab/nsp2436I436IatCatT11B.1.351.30.000876
ORF1ab/nsp2436I436IatCatT11B.1.36.100.004785
ORF1ab/nsp2436I436IatCatT11B.1.36.180.00042
ORF1ab/nsp2436I436IatCatT11B.1.36.290.000517
ORF1ab/nsp2436I436TaTcaCc11B.1.36.310.001751
ORF1ab/nsp2436I436IatCatT11B.1.3670.000792
ORF1ab/nsp2436I436IatCatT11B.1.3690.000285
ORF1ab/nsp2436I436IatCatT11B.1.4090.000781
ORF1ab/nsp2436I436IatCatT11B.1.4200.010417
ORF1ab/nsp2436I436IatCatT11B.1.4220.000812
ORF1ab/nsp2436I436TaTcaCc11B.1.4270.00005
ORF1ab/nsp2436I436IatCatT11B.1.440.008333
ORF1ab/nsp2436I436IatCatT11B.1.4680.005714
ORF1ab/nsp2436I436IatCatT11B.1.4700.001404
ORF1ab/nsp2436I436IatCatT11B.1.4970.000315
ORF1ab/nsp2436I436IatCatT11B.1.5210.004975
ORF1ab/nsp2436I436IatCatT11B.1.5250.000113
ORF1ab/nsp2436I436IatCatT11B.1.5270.003704
ORF1ab/nsp2436I436IatCatT11B.1.5380.008065
ORF1ab/nsp2436I436IatCatT11B.1.5550.022222
ORF1ab/nsp2436I436IatCatT11B.1.5560.007519
ORF1ab/nsp2436I436delATC---11B.1.5610.000397
ORF1ab/nsp2436I436IatCatT11B.1.5620.018519
ORF1ab/nsp2436I436IatCatT11B.1.5750.000303
ORF1ab/nsp2436I436IatCatT11B.1.5760.000907
ORF1ab/nsp2436I436VAtcGtc11B.1.5870.001898
ORF1ab/nsp2436I436IatCatT11B.1.5950.000261
ORF1ab/nsp2436I436TaTCaCA11B.1.5960.000087
ORF1ab/nsp2436I436VAtcGtc11B.1.5960.000087
ORF1ab/nsp2436I436IatCatT11B.1.6090.000479
ORF1ab/nsp2436I436IatCatT11B.1.6120.002653
ORF1ab/nsp2436I436EATCGAG11B.1.617.20.000004
ORF1ab/nsp2436I436KaTCaAG11B.1.617.20.000004
ORF1ab/nsp2436I436DATcGAc11B.1.617.20.000004
ORF1ab/nsp2436I436FAtcTtc11B.1.617.20.000004
ORF1ab/nsp2436I436HATCCAT11B.1.617.20.000004
ORF1ab/nsp2436I436NaTcaAc11B.1.617.20.000004
ORF1ab/nsp2436I436MatCatG11B.1.617.20.000004
ORF1ab/nsp2436I436delATC---11B.1.617.20.000004
ORF1ab/nsp2436I436IatCatT11B.1.6180.004032
ORF1ab/nsp2436I436TaTcaCc11B.1.619.10.000641
ORF1ab/nsp2436I436MatCatG11B.1.6200.000946
ORF1ab/nsp2436I436VAtcGtc11B.1.6210.000089
ORF1ab/nsp2436I436IatCatT11B.1.621.10.000506
ORF1ab/nsp2436I436IatCatT11B.1.6230.000536
ORF1ab/nsp2436I436IatCatT11B.1.6370.000073
ORF1ab/nsp2436I436IatCatT11B.1.9.50.005682
ORF1ab/nsp2436I436IatCatT11B.230.002924
ORF1ab/nsp2436I436TaTcaCc11B.3.10.001658
ORF1ab/nsp2436I436IatCatT11B.40.002208
ORF1ab/nsp2436I436IatCatT11B.550.00295
ORF1ab/nsp2436I436delATC---11B.570.015152
ORF1ab/nsp2436I436FAtcTtc11B.60.00091
ORF1ab/nsp2436I436IatCatT11B.60.00091
ORF1ab/nsp2436I436IatCatT11C.320.023256
ORF1ab/nsp2436I436delATC---11C.360.000911
ORF1ab/nsp2436I436IatCatT11C.37.10.002618
ORF1ab/nsp2436I436IatCatT11C.400.027778
ORF1ab/nsp2436I436IatCatT11N.50.001767
ORF1ab/nsp2436I436IatCatT11P.1.10.000318
ORF1ab/nsp2436I436VAtcGtc11P.1.10.000318
ORF1ab/nsp2436I436IatCatT11P.1.130.000898
ORF1ab/nsp2436I436IatCatT11P.1.160.000374
ORF1ab/nsp2436I436TaTcaCc11P.1.70.000319
ORF1ab/nsp2436I436IatCatA11P.20.000187
ORF1ab/nsp2436I436IatCatT11P.60.003145
ORF1ab/nsp2436I436delATC---11Q.20.000613
ORF1ab/nsp2436I436IatCatT11Q.30.000145
ORF1ab/nsp2436I436IatCatT11Q.40.000455
ORF1ab/nsp2436I436IatCatT11R.10.00009
ORF1ab/nsp2436I436IatCatT11W.30.005263