CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 409 & Codon = gaC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2409D409DD589DsyngaTgaC27527512030-2032

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2409D409DgaTgaC275275All0.000053
ORF1ab/nsp2409D409DgaTgaC7171B.1.1.70.000064
ORF1ab/nsp2409D409DgaTgaC4040AY.40.000062
ORF1ab/nsp2409D409DgaTgaC3939AY.430.000173
ORF1ab/nsp2409D409DgaTgaC1616AY.730.010645
ORF1ab/nsp2409D409DgaTgaC1212B.1.2430.000835
ORF1ab/nsp2409D409DgaTgaC1111B.1.617.20.000041
ORF1ab/nsp2409D409DgaTgaC1010AY.260.000283
ORF1ab/nsp2409D409DgaTgaC77B.1.360.001021
ORF1ab/nsp2409D409DgaTgaC66B.1.110.30.00431
ORF1ab/nsp2409D409DgaTgaC66B.1.36.120.057692
ORF1ab/nsp2409D409DgaTgaC55AY.250.00003
ORF1ab/nsp2409D409DgaTgaC44AY.440.000024
ORF1ab/nsp2409D409DgaTgaC44B.1.1.330.001684
ORF1ab/nsp2409D409DgaTgaC33AY.850.001282
ORF1ab/nsp2409D409DgaTgaC33B.1.2580.0002
ORF1ab/nsp2409D409DgaTgaC22AY.1030.000012
ORF1ab/nsp2409D409DgaTgaC22AY.116.10.000623
ORF1ab/nsp2409D409DgaTgaC22AY.4.2.10.000298
ORF1ab/nsp2409D409DgaTgaC22AY.880.001768
ORF1ab/nsp2409D409DgaTgaC22B.10.000018
ORF1ab/nsp2409D409DgaTgaC22B.1.1.4200.002012
ORF1ab/nsp2409D409DgaTgaC22B.1.2320.001075
ORF1ab/nsp2409D409DgaTgaC22B.1.5260.000047
ORF1ab/nsp2409D409DgaTgaC22B.1.5960.000174
ORF1ab/nsp2409D409DgaTgaC22P.1.140.000096
ORF1ab/nsp2409D409DgaTgaC11AY.1020.000027
ORF1ab/nsp2409D409DgaTgaC11AY.390.000025
ORF1ab/nsp2409D409DgaTgaC11AY.400.000964
ORF1ab/nsp2409D409DgaTgaC11AY.470.000031
ORF1ab/nsp2409D409DgaTgaC11AY.50.000021
ORF1ab/nsp2409D409DgaTgaC11AY.740.000116
ORF1ab/nsp2409D409DgaTgaC11AY.75.10.00018
ORF1ab/nsp2409D409DgaTgaC11AY.980.000079
ORF1ab/nsp2409D409DgaTgaC11B.1.10.000018
ORF1ab/nsp2409D409DgaTgaC11B.1.177.570.000281
ORF1ab/nsp2409D409DgaTgaC11B.1.20.000009
ORF1ab/nsp2409D409DgaTgaC11B.1.2210.000071
ORF1ab/nsp2409D409DgaTgaC11B.1.3500.002933
ORF1ab/nsp2409D409DgaTgaC11B.1.5250.000113
ORF1ab/nsp2409D409DgaTgaC11B.1.6370.000073
ORF1ab/nsp2409D409DgaTgaC11D.20.000075
ORF1ab/nsp2409D409DgaTgaC11P.10.000016
ORF1ab/nsp2409D409DgaTgaC11P.1.170.000162