CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 4

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp24R4CR184CnonsynCgcTgc587258700.999659815-817
ORF1ab/nsp24R4CR184CnonsynCgCTgT587220.000340599815-817
ORF1ab/nsp24R4RR184RsyncgCcgT7797440.955071815-817
ORF1ab/nsp24R4RR184RsyncgCcgA779270.0346598815-817
ORF1ab/nsp24R4RR184RsyncgCcgG77980.0102696815-817
ORF1ab/nsp24R4HR184HnonsyncGccAc6446430.998447815-817
ORF1ab/nsp24R4HR184HnonsyncGCcAT64410.0015528815-817
ORF1ab/nsp24R4SR184SnonsynCgcAgc1511511815-817
ORF1ab/nsp24R4LR184LnonsyncGccTc1221210.991803815-817
ORF1ab/nsp24R4LR184LnonsyncGCcTT12210.00819672815-817
ORF1ab/nsp24R4delR184deldelCGC---45451815-817
ORF1ab/nsp24R4GR184GnonsynCgcGgc771815-817
ORF1ab/nsp24R4PR184PnonsyncGccCc441815-817
ORF1ab/nsp24R4FR184FnonsynCGcTTc210.5815-817
ORF1ab/nsp24R4FR184FnonsynCGCTTT210.5815-817
ORF1ab/nsp24R4QR184QnonsyncGCcAG111815-817
ORF1ab/nsp24R4del2R184del2delCGc--c111815-817

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp24R4CCgcTgc58705872All0.001123
ORF1ab/nsp24R4CCgCTgT25872All0
ORF1ab/nsp24R4CCgcTgc13721372B.1.1.70.001228
ORF1ab/nsp24R4CCgcTgc978978AY.40.001522
ORF1ab/nsp24R4RcgCcgT744779All0.000142
ORF1ab/nsp24R4RcgCcgA27779All0.000005
ORF1ab/nsp24R4RcgCcgG8779All0.000002
ORF1ab/nsp24R4HcGccAc643644All0.000123
ORF1ab/nsp24R4HcGCcAT1644All0
ORF1ab/nsp24R4CCgcTgc407407B.1.617.20.001533
ORF1ab/nsp24R4CCgcTgc278278AY.440.001692
ORF1ab/nsp24R4HcGccAc213213B.1.1.70.000191
ORF1ab/nsp24R4CCgcTgc165165AY.430.000731
ORF1ab/nsp24R4CCgcTgc163163AY.1020.004322
ORF1ab/nsp24R4RcgCcgT151158B.1.1.70.000135
ORF1ab/nsp24R4RcgCcgA6158B.1.1.70.000005
ORF1ab/nsp24R4RcgCcgG1158B.1.1.70.000001
ORF1ab/nsp24R4SCgcAgc151151All0.000029
ORF1ab/nsp24R4CCgcTgc129129B.1.1.2250.928058
ORF1ab/nsp24R4LcGccTc121122All0.000023
ORF1ab/nsp24R4LcGCcTT1122All0
ORF1ab/nsp24R4RcgCcgT120120AY.1030.000745
ORF1ab/nsp24R4CCgcTgc113113AY.340.010957
ORF1ab/nsp24R4CCgcTgc110110B.1.1770.001448
ORF1ab/nsp24R4SCgcAgc107107B.1.1.70.000096
ORF1ab/nsp24R4CCgcTgc8989AY.1030.000553
ORF1ab/nsp24R4CCgcTgc8989AY.140.007833
ORF1ab/nsp24R4CCgcTgc8585AY.50.001755
ORF1ab/nsp24R4CCgcTgc7777B.1.10.001397
ORF1ab/nsp24R4RcgCcgT7272AY.250.000433
ORF1ab/nsp24R4CCgcTgc7171B.1.6290.946667
ORF1ab/nsp24R4CCgcTgc7070AY.390.00173
ORF1ab/nsp24R4CCgcTgc7070B.1.177.40.014774
ORF1ab/nsp24R4CCgcTgc7070B.1.5250.007921
ORF1ab/nsp24R4CCgcTgc6464AY.30.000637
ORF1ab/nsp24R4CCgcTgc6464B.1.5960.005577
ORF1ab/nsp24R4CCgcTgc6262B.10.000568
ORF1ab/nsp24R4RcgCcgT5658AY.440.000341
ORF1ab/nsp24R4RcgCcgA258AY.440.000012
ORF1ab/nsp24R4CCgcTgc5455AY.250.000325
ORF1ab/nsp24R4CCgCTgT155AY.250.000006
ORF1ab/nsp24R4CCgcTgc5252B.1.1.2140.002884
ORF1ab/nsp24R4CCgcTgc5050AY.9.20.001836
ORF1ab/nsp24R4CCgcTgc5050P.10.000788
ORF1ab/nsp24R4delCGC---4545All0.000009
ORF1ab/nsp24R4HcGccAc4445AY.430.000195
ORF1ab/nsp24R4HcGCcAT145AY.430.000004
ORF1ab/nsp24R4RcgCcgT4343P.10.000677
ORF1ab/nsp24R4HcGccAc4242AY.40.000065
ORF1ab/nsp24R4CCgcTgc4040B.1.1600.001248
ORF1ab/nsp24R4HcGccAc3838B.1.617.20.000143
ORF1ab/nsp24R4CCgcTgc3737AY.120.2.10.018435
ORF1ab/nsp24R4LcGccTc3737AY.40.000058
ORF1ab/nsp24R4RcgCcgT3237AY.40.00005
ORF1ab/nsp24R4RcgCcgA537AY.40.000008
ORF1ab/nsp24R4CCgcTgc3737B.1.177.120.005613
ORF1ab/nsp24R4CCgcTgc3737B.1.20.000326
ORF1ab/nsp24R4HcGccAc3434B.1.20.000299
ORF1ab/nsp24R4CCgcTgc3131B.1.2400.006682
ORF1ab/nsp24R4RcgCcgT3030AY.50.000619
ORF1ab/nsp24R4RcgCcgT2830B.1.617.20.000105
ORF1ab/nsp24R4RcgCcgA230B.1.617.20.000008
ORF1ab/nsp24R4CCgcTgc2929B.1.1.5190.001152
ORF1ab/nsp24R4LcGccTc2929B.1.1.70.000026
ORF1ab/nsp24R4CCgcTgc2626AY.260.000736
ORF1ab/nsp24R4CCgcTgc2626AY.470.000809
ORF1ab/nsp24R4RcgCcgT2225B.1.20.000194
ORF1ab/nsp24R4RcgCcgG225B.1.20.000018
ORF1ab/nsp24R4RcgCcgA125B.1.20.000009
ORF1ab/nsp24R4HcGccAc2424AY.250.000144
ORF1ab/nsp24R4CCgcTgc2424AY.330.001603
ORF1ab/nsp24R4HcGccAc2424AY.440.000146
ORF1ab/nsp24R4CCgcTgc2222AY.1190.000777
ORF1ab/nsp24R4RcgCcgT1822B.10.000165
ORF1ab/nsp24R4RcgCcgA422B.10.000037
ORF1ab/nsp24R4CCgcTgc2121AY.200.000816
ORF1ab/nsp24R4CCgcTgc2121B.1.2210.001492
ORF1ab/nsp24R4CCgcTgc1919B.1.5260.000447
ORF1ab/nsp24R4CCgcTgc1818AY.290.000284
ORF1ab/nsp24R4CCgcTgc1818AY.98.10.000872
ORF1ab/nsp24R4RcgCcgT1717AY.60.000699
ORF1ab/nsp24R4CCgcTgc1717B.1.6210.001505
ORF1ab/nsp24R4CCgcTgc1616AY.1210.002165
ORF1ab/nsp24R4CCgcTgc1616B.1.177.600.003495
ORF1ab/nsp24R4RcgCcgT1515B.1.2210.001065
ORF1ab/nsp24R4CCgcTgc1515B.1.6090.007191
ORF1ab/nsp24R4CCgcTgc1414AY.1070.006524
ORF1ab/nsp24R4HcGccAc1414AY.200.000544
ORF1ab/nsp24R4CCgcTgc1414B.1.3510.000416
ORF1ab/nsp24R4CCgcTgc1313AY.420.000523
ORF1ab/nsp24R4CCgcTgc1313B.1.177.210.000994
ORF1ab/nsp24R4CCgcTgc1212AY.1200.000446
ORF1ab/nsp24R4CCgcTgc1212AY.39.10.000475
ORF1ab/nsp24R4CCgcTgc1111AY.4.20.000239
ORF1ab/nsp24R4CCgcTgc1111AY.460.001145
ORF1ab/nsp24R4CCgcTgc1111B.1.4290.000259
ORF1ab/nsp24R4CCgcTgc1010AY.1180.000626
ORF1ab/nsp24R4HcGccAc1010AY.30.000099
ORF1ab/nsp24R4CCgcTgc1010AY.360.001482
ORF1ab/nsp24R4CCgcTgc1010AY.690.001867
ORF1ab/nsp24R4CCgcTgc1010AY.980.00079
ORF1ab/nsp24R4RcgCcgT1010B.1.10.000181
ORF1ab/nsp24R4HcGccAc1010B.1.1770.000132
ORF1ab/nsp24R4CCgcTgc1010B.1.177.150.006309
ORF1ab/nsp24R4RcgCcgT1010B.1.4270.000505
ORF1ab/nsp24R4SCgcAgc1010B.1.617.20.000038
ORF1ab/nsp24R4CCgcTgc99AY.1170.000761
ORF1ab/nsp24R4CCgcTgc99AY.270.000582
ORF1ab/nsp24R4HcGccAc99AY.50.000186
ORF1ab/nsp24R4CCgcTgc99AY.7.10.001014
ORF1ab/nsp24R4CCgcTgc99AY.99.20.000829
ORF1ab/nsp24R4CCgcTgc99B.1.177.830.013333
ORF1ab/nsp24R4LcGccTc88AY.1000.000368
ORF1ab/nsp24R4CCgcTgc88AY.3.10.000682
ORF1ab/nsp24R4RcgCcgT88AY.330.000534
ORF1ab/nsp24R4CCgcTgc88AY.450.000973
ORF1ab/nsp24R4CCgcTgc88AY.9.10.00067
ORF1ab/nsp24R4HcGccAc88B.1.177.150.005047
ORF1ab/nsp24R4RcgCcgT88B.1.2580.000532
ORF1ab/nsp24R4RcgCcgT88B.1.5260.000188
ORF1ab/nsp24R4LcGccTc88B.1.617.20.00003
ORF1ab/nsp24R4HcGccAc88P.10.000126
ORF1ab/nsp24R4CCgcTgc88Q.30.00116
ORF1ab/nsp24R4GCgcGgc77All0.000001
ORF1ab/nsp24R4CCgcTgc77AY.1000.000322
ORF1ab/nsp24R4CCgcTgc77AY.1050.004502
ORF1ab/nsp24R4CCgcTgc77B.1.2320.003761
ORF1ab/nsp24R4HcGccAc77B.1.2340.000924
ORF1ab/nsp24R4HcGccAc77B.1.2580.000466
ORF1ab/nsp24R4RcgCcgT67B.1.3510.000178
ORF1ab/nsp24R4RcgCcgA17B.1.3510.00003
ORF1ab/nsp24R4HcGccAc66AY.1000.000276
ORF1ab/nsp24R4HcGccAc66AY.1030.000037
ORF1ab/nsp24R4LcGccTc66AY.1030.000037
ORF1ab/nsp24R4CCgcTgc66AY.1110.001099
ORF1ab/nsp24R4CCgcTgc66AY.400.005786
ORF1ab/nsp24R4CCgcTgc66AY.60.000247
ORF1ab/nsp24R4HcGccAc66AY.9.10.000502
ORF1ab/nsp24R4RcgCcgT66AY.99.20.000553
ORF1ab/nsp24R4CCgcTgc66B0.000767
ORF1ab/nsp24R4HcGccAc66B.10.000055
ORF1ab/nsp24R4SCgcAgc66B.10.000055
ORF1ab/nsp24R4HcGccAc66B.1.1.2140.000333
ORF1ab/nsp24R4HcGccAc66B.1.1.4200.006036
ORF1ab/nsp24R4delCGC---66B.1.1.70.000005
ORF1ab/nsp24R4CCgcTgc66B.1.2580.000399
ORF1ab/nsp24R4CCgcTgc66B.1.258.170.000624
ORF1ab/nsp24R4HcGccAc66B.1.5260.000141
ORF1ab/nsp24R4HcGccAc66B.1.6210.000531
ORF1ab/nsp24R4CCgcTgc66P.1.70.001916
ORF1ab/nsp24R4SCgcAgc55AY.1210.000677
ORF1ab/nsp24R4CCgcTgc55AY.230.000349
ORF1ab/nsp24R4HcGccAc55AY.4.20.000108
ORF1ab/nsp24R4LcGccTc55AY.440.00003
ORF1ab/nsp24R4CCgcTgc55AY.540.000477
ORF1ab/nsp24R4HcGccAc55AY.610.000524
ORF1ab/nsp24R4CCgcTgc55AY.640.002976
ORF1ab/nsp24R4CCgcTgc55AY.670.002321
ORF1ab/nsp24R4CCgcTgc55AY.820.006784
ORF1ab/nsp24R4CCgcTgc55B.1.1.2170.018182
ORF1ab/nsp24R4CCgcTgc55B.1.1.3110.001791
ORF1ab/nsp24R4delCGC---55B.1.1.330.002104
ORF1ab/nsp24R4CCgcTgc55B.1.1.5170.034014
ORF1ab/nsp24R4RcgCcgT55B.1.1770.000066
ORF1ab/nsp24R4RcgCcgT55B.1.177.210.000382
ORF1ab/nsp24R4CCgcTgc55B.1.177.670.038168
ORF1ab/nsp24R4CCgcTgc55B.1.2340.00066
ORF1ab/nsp24R4HcGccAc55B.1.3510.000149
ORF1ab/nsp24R4CCgcTgc55B.1.3960.003529
ORF1ab/nsp24R4RcgCcgT55C.370.00058
ORF1ab/nsp24R4CCgcTgc55P.1.140.000239
ORF1ab/nsp24R4PcGccCc44All0.000001
ORF1ab/nsp24R4CCgcTgc44AY.1060.00134
ORF1ab/nsp24R4RcgCcgT44AY.1130.00057
ORF1ab/nsp24R4HcGccAc44AY.1180.000251
ORF1ab/nsp24R4delCGC---44AY.250.000024
ORF1ab/nsp24R4RcgCcgG34AY.290.000047
ORF1ab/nsp24R4RcgCcgA14AY.290.000016
ORF1ab/nsp24R4CCgcTgc44AY.4.10.00295
ORF1ab/nsp24R4RcgCcgT44AY.430.000018
ORF1ab/nsp24R4HcGccAc44AY.650.002132
ORF1ab/nsp24R4CCgcTgc44AY.740.000463
ORF1ab/nsp24R4CCgcTgc44AY.840.00175
ORF1ab/nsp24R4CCgcTgc44AY.920.001149
ORF1ab/nsp24R4HcGccAc44B.1.10.000073
ORF1ab/nsp24R4CCgcTgc44B.1.1.2280.012195
ORF1ab/nsp24R4delCGC---44B.1.1.3480.003185
ORF1ab/nsp24R4CCgcTgc44B.1.1.3720.002755
ORF1ab/nsp24R4CCgcTgc44B.1.1.500.002716
ORF1ab/nsp24R4CCgcTgc44B.1.177.500.018779
ORF1ab/nsp24R4CCgcTgc44B.1.2430.000278
ORF1ab/nsp24R4LcGccTc44B.1.258.170.000416
ORF1ab/nsp24R4CCgcTgc44B.1.360.000584
ORF1ab/nsp24R4CCgcTgc44B.1.466.20.001565
ORF1ab/nsp24R4CCgcTgc44B.40.00883
ORF1ab/nsp24R4CCgcTgc44Q.10.000505
ORF1ab/nsp24R4CCgcTgc33AY.130.000483
ORF1ab/nsp24R4HcGccAc33AY.290.000047
ORF1ab/nsp24R4CCgcTgc33AY.29.10.000662
ORF1ab/nsp24R4SCgcAgc33AY.430.000013
ORF1ab/nsp24R4CCgcTgc33AY.46.40.000494
ORF1ab/nsp24R4RcgCcgT33AY.46.60.000217
ORF1ab/nsp24R4CCgcTgc33AY.610.000314
ORF1ab/nsp24R4HcGccAc33AY.620.001307
ORF1ab/nsp24R4CCgcTgc33AY.850.001282
ORF1ab/nsp24R4CCgcTgc33AY.880.002653
ORF1ab/nsp24R4delCGC---33B.10.000027
ORF1ab/nsp24R4CCgcTgc33B.1.1.1980.004405
ORF1ab/nsp24R4CCgcTgc33B.1.1.2370.016216
ORF1ab/nsp24R4HcGccAc33B.1.1.280.000934
ORF1ab/nsp24R4CCgcTgc33B.1.1.3690.001339
ORF1ab/nsp24R4CCgcTgc33B.1.1.4290.013825
ORF1ab/nsp24R4CCgcTgc33B.1.2060.002447
ORF1ab/nsp24R4HcGccAc33B.1.4270.000151
ORF1ab/nsp24R4CCgcTgc33B.1.5170.001281
ORF1ab/nsp24R4CCgcTgc33D.20.000225
ORF1ab/nsp24R4RcgCcgT33D.20.000225
ORF1ab/nsp24R4RcgCcgT33P.1.120.001452
ORF1ab/nsp24R4RcgCcgT33P.1.150.000697
ORF1ab/nsp24R4CCgcTgc33Q.40.001364
ORF1ab/nsp24R4CCgcTgc33R.10.00027
ORF1ab/nsp24R4FCGCTTT120.055556
ORF1ab/nsp24R4CCgcTgc120.055556
ORF1ab/nsp24R4FCGcTTc120.055556
ORF1ab/nsp24R4LcGccTc120.055556
ORF1ab/nsp24R4LcGCcTT120.055556
ORF1ab/nsp24R4CCgCTgT120.055556
ORF1ab/nsp24R4CCgcTgc22A.2.5.10.009615
ORF1ab/nsp24R4FCGCTTT12All0
ORF1ab/nsp24R4FCGcTTc12All0
ORF1ab/nsp24R4CCgcTgc22AW.10.006098
ORF1ab/nsp24R4RcgCcgT22AY.1000.000092
ORF1ab/nsp24R4RcgCcgT22AY.1020.000053
ORF1ab/nsp24R4HcGccAc22AY.1020.000053
ORF1ab/nsp24R4HcGccAc22AY.1130.000285
ORF1ab/nsp24R4CCgcTgc22AY.1160.000574
ORF1ab/nsp24R4CCgcTgc22AY.120.000632
ORF1ab/nsp24R4LcGccTc22AY.120.20.002571
ORF1ab/nsp24R4HcGccAc22AY.1210.000271
ORF1ab/nsp24R4CCgcTgc22AY.16.10.00094
ORF1ab/nsp24R4HcGccAc22AY.230.000139
ORF1ab/nsp24R4LcGccTc22AY.250.000012
ORF1ab/nsp24R4HcGccAc22AY.260.000057
ORF1ab/nsp24R4SCgcAgc22AY.290.000032
ORF1ab/nsp24R4CCgcTgc22AY.34.10.00102
ORF1ab/nsp24R4CCgcTgc22AY.370.000632
ORF1ab/nsp24R4HcGccAc22AY.390.000049
ORF1ab/nsp24R4GCgcGgc22AY.40.000003
ORF1ab/nsp24R4CCgcTgc22AY.4.50.000215
ORF1ab/nsp24R4HcGccAc22AY.420.00008
ORF1ab/nsp24R4LcGccTc22AY.430.000009
ORF1ab/nsp24R4HcGccAc22AY.450.000243
ORF1ab/nsp24R4CCgcTgc22AY.46.60.000144
ORF1ab/nsp24R4CCgcTgc22AY.550.001835
ORF1ab/nsp24R4CCgcTgc22AY.590.001059
ORF1ab/nsp24R4CCgcTgc22AY.70.000392
ORF1ab/nsp24R4RcgCcgT22AY.980.000158
ORF1ab/nsp24R4RcgCcgT22B0.000256
ORF1ab/nsp24R4LcGccTc22B.10.000018
ORF1ab/nsp24R4CCgcTgc22B.1.1.10.000653
ORF1ab/nsp24R4CCgcTgc22B.1.1.2160.001781
ORF1ab/nsp24R4CCgcTgc22B.1.1.2220.000408
ORF1ab/nsp24R4CCgcTgc22B.1.1.2700.020619
ORF1ab/nsp24R4CCgcTgc22B.1.1.3060.000877
ORF1ab/nsp24R4HcGccAc22B.1.1.3370.007194
ORF1ab/nsp24R4CCgcTgc22B.1.1.4090.005666
ORF1ab/nsp24R4CCgcTgc22B.1.1.4160.00181
ORF1ab/nsp24R4RcgCcgT22B.1.1.4340.000697
ORF1ab/nsp24R4HcGccAc22B.1.1.5190.000079
ORF1ab/nsp24R4CCgcTgc22B.1.1.540.006042
ORF1ab/nsp24R4CCgcTgc22B.1.1.570.022989
ORF1ab/nsp24R4CCgcTgc22B.1.1.700.000682
ORF1ab/nsp24R4CCgcTgc22B.1.177.440.001038
ORF1ab/nsp24R4CCgcTgc22B.1.177.540.001213
ORF1ab/nsp24R4CCgcTgc22B.1.177.570.000562
ORF1ab/nsp24R4CCgcTgc22B.1.177.70.00033
ORF1ab/nsp24R4SCgcAgc22B.1.20.000018
ORF1ab/nsp24R4CCgcTgc22B.1.36.10.002281
ORF1ab/nsp24R4CCgcTgc22B.1.36.170.000988
ORF1ab/nsp24R4CCgcTgc22B.1.36.180.00084
ORF1ab/nsp24R4CCgcTgc22B.1.36.290.001035
ORF1ab/nsp24R4CCgcTgc22B.1.3890.002004
ORF1ab/nsp24R4HcGccAc22B.1.4000.000858
ORF1ab/nsp24R4CCgcTgc22B.1.4040.002604
ORF1ab/nsp24R4HcGccAc22B.1.4290.000047
ORF1ab/nsp24R4CCgcTgc22B.1.5880.00182
ORF1ab/nsp24R4RcgCcgT22B.1.5960.000174
ORF1ab/nsp24R4CCgcTgc22B.1.617.10.000258
ORF1ab/nsp24R4delCGC---22B.1.617.20.000008
ORF1ab/nsp24R4CCgcTgc22B.1.6190.001742
ORF1ab/nsp24R4CCgcTgc22B.1.6370.000146
ORF1ab/nsp24R4CCgcTgc22B.6.30.052632
ORF1ab/nsp24R4CCgcTgc22B.6.60.001778
ORF1ab/nsp24R4delCGC---22N.40.008511
ORF1ab/nsp24R4delCGC---22N.60.014184
ORF1ab/nsp24R4RcgCcgT22P.1.10.000635
ORF1ab/nsp24R4CCgcTgc22P.20.000373
ORF1ab/nsp24R4delCGC---22P.20.000373
ORF1ab/nsp24R4CCgcTgc22Q.80.00033
ORF1ab/nsp24R4RcgCcgT110.055556
ORF1ab/nsp24R4SCgcAgc11A0.000387
ORF1ab/nsp24R4PcGccCc11A.10.000282
ORF1ab/nsp24R4HcGccAc11A.10.000282
ORF1ab/nsp24R4CCgcTgc11A.20.000662
ORF1ab/nsp24R4delCGC---11A.2.20.001689
ORF1ab/nsp24R4CCgcTgc11A.2.50.000499
ORF1ab/nsp24R4SCgcAgc11A.2.50.000499
ORF1ab/nsp24R4HcGccAc11A.2.50.000499
ORF1ab/nsp24R4HcGccAc11A.23.10.000704
ORF1ab/nsp24R4CCgcTgc11A.270.001656
ORF1ab/nsp24R4HcGccAc11A.50.001923
ORF1ab/nsp24R4QcGCcAG11All0
ORF1ab/nsp24R4del2CGc--c11All0
ORF1ab/nsp24R4CCgcTgc11AM.40.003571
ORF1ab/nsp24R4CCgcTgc11AU.20.002421
ORF1ab/nsp24R4CCgcTgc11AY.10.000396
ORF1ab/nsp24R4CCgcTgc11AY.1010.00049
ORF1ab/nsp24R4SCgcAgc11AY.1020.000027
ORF1ab/nsp24R4HcGccAc11AY.1050.000643
ORF1ab/nsp24R4HcGccAc11AY.1060.000335
ORF1ab/nsp24R4CCgcTgc11AY.1080.001103
ORF1ab/nsp24R4CCgcTgc11AY.1090.00074
ORF1ab/nsp24R4CCgcTgc11AY.1100.000113
ORF1ab/nsp24R4RcgCcgT11AY.1100.000113
ORF1ab/nsp24R4RcgCcgA11AY.1110.000183
ORF1ab/nsp24R4delCGC---11AY.1110.000183
ORF1ab/nsp24R4CCgcTgc11AY.1130.000142
ORF1ab/nsp24R4CCgcTgc11AY.1140.000231
ORF1ab/nsp24R4RcgCcgG11AY.1160.000287
ORF1ab/nsp24R4HcGccAc11AY.1160.000287
ORF1ab/nsp24R4CCgcTgc11AY.116.10.000311
ORF1ab/nsp24R4SCgcAgc11AY.1180.000063
ORF1ab/nsp24R4RcgCcgT11AY.1180.000063
ORF1ab/nsp24R4RcgCcgT11AY.1190.000035
ORF1ab/nsp24R4RcgCcgT11AY.1200.000037
ORF1ab/nsp24R4LcGccTc11AY.1200.000037
ORF1ab/nsp24R4HcGccAc11AY.1200.000037
ORF1ab/nsp24R4HcGccAc11AY.120.10.000321
ORF1ab/nsp24R4CCgcTgc11AY.160.00038
ORF1ab/nsp24R4RcgCcgT11AY.200.000039
ORF1ab/nsp24R4CCgcTgc11AY.220.002092
ORF1ab/nsp24R4RcgCcgT11AY.230.00007
ORF1ab/nsp24R4CCgcTgc11AY.240.000431
ORF1ab/nsp24R4LcGccTc11AY.260.000028
ORF1ab/nsp24R4HcGccAc11AY.270.000065
ORF1ab/nsp24R4RcgCcgT11AY.270.000065
ORF1ab/nsp24R4RcgCcgT11AY.280.00189
ORF1ab/nsp24R4RcgCcgT11AY.30.00001
ORF1ab/nsp24R4CCgcTgc11AY.300.000396
ORF1ab/nsp24R4RcgCcgT11AY.300.000396
ORF1ab/nsp24R4CCgcTgc11AY.320.000532
ORF1ab/nsp24R4LcGccTc11AY.330.000067
ORF1ab/nsp24R4HcGccAc11AY.350.000233
ORF1ab/nsp24R4RcgCcgT11AY.360.000148
ORF1ab/nsp24R4SCgcAgc11AY.360.000148
ORF1ab/nsp24R4CCgcTgc11AY.380.000499
ORF1ab/nsp24R4HcGccAc11AY.39.10.00004
ORF1ab/nsp24R4PcGccCc11AY.40.000002
ORF1ab/nsp24R4RcgCcgT11AY.4.20.000022
ORF1ab/nsp24R4LcGccTc11AY.4.2.10.000149
ORF1ab/nsp24R4CCgcTgc11AY.4.2.10.000149
ORF1ab/nsp24R4CCgcTgc11AY.4.40.000409
ORF1ab/nsp24R4delCGC---11AY.4.50.000107
ORF1ab/nsp24R4RcgCcgT11AY.4.50.000107
ORF1ab/nsp24R4HcGccAc11AY.410.000294
ORF1ab/nsp24R4RcgCcgT11AY.420.00004
ORF1ab/nsp24R4delCGC---11AY.430.000004
ORF1ab/nsp24R4RcgCcgT11AY.450.000122
ORF1ab/nsp24R4SCgcAgc11AY.450.000122
ORF1ab/nsp24R4CCgcTgc11AY.46.20.000635
ORF1ab/nsp24R4RcgCcgT11AY.46.40.000165
ORF1ab/nsp24R4CCgcTgc11AY.46.50.000198
ORF1ab/nsp24R4HcGccAc11AY.470.000031
ORF1ab/nsp24R4RcgCcgT11AY.470.000031
ORF1ab/nsp24R4CCgcTgc11AY.480.000465
ORF1ab/nsp24R4SCgcAgc11AY.50.000021
ORF1ab/nsp24R4GCgcGgc11AY.50.000021
ORF1ab/nsp24R4CCgcTgc11AY.5.30.000337
ORF1ab/nsp24R4HcGccAc11AY.520.000814
ORF1ab/nsp24R4SCgcAgc11AY.520.000814
ORF1ab/nsp24R4CCgcTgc11AY.530.000288
ORF1ab/nsp24R4HcGccAc11AY.550.000917
ORF1ab/nsp24R4CCgcTgc11AY.570.000656
ORF1ab/nsp24R4RcgCcgT11AY.580.000907
ORF1ab/nsp24R4HcGccAc11AY.60.000041
ORF1ab/nsp24R4GCgcGgc11AY.610.000105
ORF1ab/nsp24R4CCgcTgc11AY.620.000436
ORF1ab/nsp24R4CCgcTgc11AY.650.000533
ORF1ab/nsp24R4CCgcTgc11AY.700.000209
ORF1ab/nsp24R4HcGccAc11AY.730.000665
ORF1ab/nsp24R4HcGccAc11AY.740.000116
ORF1ab/nsp24R4CCgcTgc11AY.750.000056
ORF1ab/nsp24R4CCgcTgc11AY.75.10.00018
ORF1ab/nsp24R4SCgcAgc11AY.770.001127
ORF1ab/nsp24R4CCgcTgc11AY.780.001541
ORF1ab/nsp24R4CCgcTgc11AY.830.001724
ORF1ab/nsp24R4SCgcAgc11AY.90.000068
ORF1ab/nsp24R4CCgcTgc11AY.90.000068
ORF1ab/nsp24R4RcgCcgA11AY.9.20.000037
ORF1ab/nsp24R4HcGccAc11AY.900.000684
ORF1ab/nsp24R4CCgcTgc11AY.910.00073
ORF1ab/nsp24R4HcGccAc11AY.980.000079
ORF1ab/nsp24R4CCgcTgc11AY.990.001049
ORF1ab/nsp24R4SCgcAgc11B0.000128
ORF1ab/nsp24R4PcGccCc11B.10.000009
ORF1ab/nsp24R4LcGccTc11B.1.10.000018
ORF1ab/nsp24R4GCgcGgc11B.1.10.000018
ORF1ab/nsp24R4delCGC---11B.1.10.000018
ORF1ab/nsp24R4LcGccTc11B.1.1.10.000327
ORF1ab/nsp24R4CCgcTgc11B.1.1.100.001115
ORF1ab/nsp24R4CCgcTgc11B.1.1.1410.002012
ORF1ab/nsp24R4CCgcTgc11B.1.1.1530.001095
ORF1ab/nsp24R4CCgcTgc11B.1.1.1550.071429
ORF1ab/nsp24R4CCgcTgc11B.1.1.1590.004673
ORF1ab/nsp24R4CCgcTgc11B.1.1.1700.001247
ORF1ab/nsp24R4RcgCcgT11B.1.1.1740.003378
ORF1ab/nsp24R4CCgcTgc11B.1.1.1740.003378
ORF1ab/nsp24R4CCgcTgc11B.1.1.1760.000439
ORF1ab/nsp24R4CCgcTgc11B.1.1.2000.007463
ORF1ab/nsp24R4CCgcTgc11B.1.1.2070.001182
ORF1ab/nsp24R4HcGccAc11B.1.1.2220.000204
ORF1ab/nsp24R4RcgCcgT11B.1.1.2220.000204
ORF1ab/nsp24R4CCgcTgc11B.1.1.2410.00207
ORF1ab/nsp24R4CCgcTgc11B.1.1.2530.002506
ORF1ab/nsp24R4CCgcTgc11B.1.1.2650.003155
ORF1ab/nsp24R4CCgcTgc11B.1.1.2740.005051
ORF1ab/nsp24R4CCgcTgc11B.1.1.280.000311
ORF1ab/nsp24R4RcgCcgT11B.1.1.280.000311
ORF1ab/nsp24R4CCgcTgc11B.1.1.2840.000107
ORF1ab/nsp24R4CCgcTgc11B.1.1.3050.003861
ORF1ab/nsp24R4HcGccAc11B.1.1.3060.000438
ORF1ab/nsp24R4CCgcTgc11B.1.1.3170.000412
ORF1ab/nsp24R4RcgCcgT11B.1.1.3170.000412
ORF1ab/nsp24R4CCgcTgc11B.1.1.3220.008772
ORF1ab/nsp24R4CCgcTgc11B.1.1.3260.001761
ORF1ab/nsp24R4CCgcTgc11B.1.1.330.000421
ORF1ab/nsp24R4HcGccAc11B.1.1.3540.004386
ORF1ab/nsp24R4RcgCcgT11B.1.1.3560.008547
ORF1ab/nsp24R4CCgcTgc11B.1.1.370.000193
ORF1ab/nsp24R4RcgCcgT11B.1.1.370.000193
ORF1ab/nsp24R4CCgcTgc11B.1.1.390.00051
ORF1ab/nsp24R4HcGccAc11B.1.1.4090.002833
ORF1ab/nsp24R4CCgcTgc11B.1.1.4110.014706
ORF1ab/nsp24R4CCgcTgc11B.1.1.4120.007634
ORF1ab/nsp24R4delCGC---11B.1.1.4200.001006
ORF1ab/nsp24R4CCgcTgc11B.1.1.4640.001473
ORF1ab/nsp24R4CCgcTgc11B.1.1.510.001718
ORF1ab/nsp24R4CCgcTgc11B.1.1.5210.005348
ORF1ab/nsp24R4CCgcTgc11B.1.1.630.000386
ORF1ab/nsp24R4QcGCcAG11B.1.1.70.000001
ORF1ab/nsp24R4GCgcGgc11B.1.1.70.000001
ORF1ab/nsp24R4CCgcTgc11B.1.1.740.00431
ORF1ab/nsp24R4HcGccAc11B.1.1050.009615
ORF1ab/nsp24R4CCgcTgc11B.1.110.30.000718
ORF1ab/nsp24R4CCgcTgc11B.1.1110.001175
ORF1ab/nsp24R4CCgcTgc11B.1.1490.003425
ORF1ab/nsp24R4CCgcTgc11B.1.1530.018868
ORF1ab/nsp24R4HcGccAc11B.1.1600.000031
ORF1ab/nsp24R4CCgcTgc11B.1.160.160.000929
ORF1ab/nsp24R4LcGccTc11B.1.1770.000013
ORF1ab/nsp24R4CCgcTgc11B.1.177.100.000878
ORF1ab/nsp24R4CCgcTgc11B.1.177.170.000821
ORF1ab/nsp24R4HcGccAc11B.1.177.210.000076
ORF1ab/nsp24R4CCgcTgc11B.1.177.410.0025
ORF1ab/nsp24R4CCgcTgc11B.1.177.430.001477
ORF1ab/nsp24R4CCgcTgc11B.1.177.50.001242
ORF1ab/nsp24R4CCgcTgc11B.1.177.520.001757
ORF1ab/nsp24R4RcgCcgT11B.1.177.60.000977
ORF1ab/nsp24R4HcGccAc11B.1.177.600.000218
ORF1ab/nsp24R4RcgCcgA11B.1.177.720.00339
ORF1ab/nsp24R4HcGccAc11B.1.177.730.000566
ORF1ab/nsp24R4CCgcTgc11B.1.177.770.000726
ORF1ab/nsp24R4CCgcTgc11B.1.177.790.002342
ORF1ab/nsp24R4RcgCcgT11B.1.177.80.000752
ORF1ab/nsp24R4CCgcTgc11B.1.177.810.000189
ORF1ab/nsp24R4delCGC---11B.1.177.830.001481
ORF1ab/nsp24R4CCgcTgc11B.1.177.850.005435
ORF1ab/nsp24R4CCgcTgc11B.1.1920.009259
ORF1ab/nsp24R4LcGccTc11B.1.20.000009
ORF1ab/nsp24R4CCgcTgc11B.1.214.20.0006
ORF1ab/nsp24R4CCgcTgc11B.1.2180.005155
ORF1ab/nsp24R4RcgCcgT11B.1.220.001318
ORF1ab/nsp24R4HcGccAc11B.1.2210.000071
ORF1ab/nsp24R4CCgcTgc11B.1.221.10.002907
ORF1ab/nsp24R4HcGccAc11B.1.221.40.004167
ORF1ab/nsp24R4CCgcTgc11B.1.2270.047619
ORF1ab/nsp24R4HcGccAc11B.1.2320.000537
ORF1ab/nsp24R4CCgcTgc11B.1.2390.001221
ORF1ab/nsp24R4RcgCcgT11B.1.2400.000216
ORF1ab/nsp24R4CCgcTgc11B.1.2410.000812
ORF1ab/nsp24R4LcGccTc11B.1.2430.00007
ORF1ab/nsp24R4RcgCcgT11B.1.2430.00007
ORF1ab/nsp24R4CCgcTgc11B.1.258.140.00098
ORF1ab/nsp24R4SCgcAgc11B.1.2600.003344
ORF1ab/nsp24R4HcGccAc11B.1.2650.001271
ORF1ab/nsp24R4SCgcAgc11B.1.3010.005917
ORF1ab/nsp24R4CCgcTgc11B.1.3110.000275
ORF1ab/nsp24R4CCgcTgc11B.1.3200.001245
ORF1ab/nsp24R4CCgcTgc11B.1.3360.002439
ORF1ab/nsp24R4CCgcTgc11B.1.3490.000715
ORF1ab/nsp24R4delCGC---11B.1.351.30.000876
ORF1ab/nsp24R4SCgcAgc11B.1.360.000146
ORF1ab/nsp24R4RcgCcgA11B.1.360.000146
ORF1ab/nsp24R4delCGC---11B.1.360.000146
ORF1ab/nsp24R4HcGccAc11B.1.360.000146
ORF1ab/nsp24R4LcGccTc11B.1.36.290.000517
ORF1ab/nsp24R4CCgcTgc11B.1.36.80.001
ORF1ab/nsp24R4CCgcTgc11B.1.36.90.003215
ORF1ab/nsp24R4CCgcTgc11B.1.3690.000285
ORF1ab/nsp24R4CCgcTgc11B.1.3930.028571
ORF1ab/nsp24R4RcgCcgG11B.1.3980.002976
ORF1ab/nsp24R4CCgcTgc11B.1.4000.000429
ORF1ab/nsp24R4CCgcTgc11B.1.4030.003268
ORF1ab/nsp24R4CCgcTgc11B.1.4050.012346
ORF1ab/nsp24R4CCgcTgc11B.1.4160.001269
ORF1ab/nsp24R4CCgcTgc11B.1.416.10.001563
ORF1ab/nsp24R4delCGC---11B.1.4270.00005
ORF1ab/nsp24R4CCgcTgc11B.1.4270.00005
ORF1ab/nsp24R4delCGC---11B.1.4290.000024
ORF1ab/nsp24R4del2CGc--c11B.1.4290.000024
ORF1ab/nsp24R4CCgcTgc11B.1.4430.004673
ORF1ab/nsp24R4RcgCcgT11B.1.466.20.000391
ORF1ab/nsp24R4RcgCcgT11B.1.4710.002732
ORF1ab/nsp24R4CCgcTgc11B.1.5030.002488
ORF1ab/nsp24R4HcGccAc11B.1.5170.000427
ORF1ab/nsp24R4RcgCcgT11B.1.5170.000427
ORF1ab/nsp24R4CCgcTgc11B.1.5210.004975
ORF1ab/nsp24R4LcGccTc11B.1.5260.000024
ORF1ab/nsp24R4CCgcTgc11B.1.5510.00129
ORF1ab/nsp24R4HcGccAc11B.1.5560.007519
ORF1ab/nsp24R4CCgcTgc11B.1.5580.004566
ORF1ab/nsp24R4CCgcTgc11B.1.5650.00081
ORF1ab/nsp24R4CCgcTgc11B.1.5740.002151
ORF1ab/nsp24R4CCgcTgc11B.1.5750.000303
ORF1ab/nsp24R4LcGccTc11B.1.5960.000087
ORF1ab/nsp24R4HcGccAc11B.1.6090.000479
ORF1ab/nsp24R4GCgcGgc11B.1.617.20.000004
ORF1ab/nsp24R4PcGccCc11B.1.617.20.000004
ORF1ab/nsp24R4delCGC---11B.1.617.30.002985
ORF1ab/nsp24R4CCgcTgc11B.1.619.10.000641
ORF1ab/nsp24R4RcgCcgA11B.1.6200.000946
ORF1ab/nsp24R4SCgcAgc11B.1.6230.000536
ORF1ab/nsp24R4CCgcTgc11B.1.6360.006711
ORF1ab/nsp24R4LcGccTc11B.1.6370.000073
ORF1ab/nsp24R4delCGC---11B.1.6380.052632
ORF1ab/nsp24R4CCgcTgc11B.100.008264
ORF1ab/nsp24R4CCgcTgc11B.4.70.010101
ORF1ab/nsp24R4CCgcTgc11B.400.000364
ORF1ab/nsp24R4CCgcTgc11B.570.015152
ORF1ab/nsp24R4CCgcTgc11C.260.007353
ORF1ab/nsp24R4delCGC---11C.350.000774
ORF1ab/nsp24R4CCgcTgc11C.390.018868
ORF1ab/nsp24R4HcGccAc11N.40.004255
ORF1ab/nsp24R4CCgcTgc11N.50.001767
ORF1ab/nsp24R4LcGccTc11N.50.001767
ORF1ab/nsp24R4LcGccTc11P.1.140.000048
ORF1ab/nsp24R4CCgcTgc11P.1.150.000232
ORF1ab/nsp24R4CCgcTgc11P.1.170.000162
ORF1ab/nsp24R4SCgcAgc11P.1.70.000319
ORF1ab/nsp24R4RcgCcgT11P.20.000187
ORF1ab/nsp24R4RcgCcgT11P.30.001595
ORF1ab/nsp24R4delCGC---11Q.20.000613
ORF1ab/nsp24R4HcGccAc11Q.80.000165
ORF1ab/nsp24R4CCgcTgc11W.10.008696
ORF1ab/nsp24R4CCgcTgc11Y.10.012821