CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 390 | L390L | L570L | syn | Cta | Tta | 4454 | 4082 | 0.91648 | 1973-1975 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4082 | 4454 | All | 0.000781 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 479 | 491 | B.1.1.7 | 0.000429 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 378 | 378 | AY.6 | 0.015547 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 136 | 245 | B.1.617.2 | 0.000512 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 229 | 229 | Q.1 | 0.028929 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 211 | 211 | B.1.221 | 0.014988 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 194 | 197 | AY.4 | 0.000302 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 190 | 191 | AY.103 | 0.00118 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 152 | 152 | AY.29 | 0.002398 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 139 | 146 | AY.44 | 0.000846 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 144 | 144 | B.1.1.374 | 0.342043 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 140 | 140 | AY.120 | 0.005205 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 90 | 92 | B.1 | 0.000824 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 85 | 85 | AY.45 | 0.010343 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 81 | 81 | B.1.1.284 | 0.008699 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 79 | AY.100 | 0.000414 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 74 | 75 | P.1 | 0.001166 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 74 | 74 | B.1.1.15 | 1 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 69 | 70 | B.1.2 | 0.000608 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 59 | 59 | AY.43 | 0.000261 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 52 | 52 | AY.25 | 0.000313 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 51 | 51 | AY.5 | 0.001053 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 48 | 49 | B.1.1 | 0.000871 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 43 | 45 | AY.99.2 | 0.003963 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 41 | 41 | AY.4.2 | 0.000889 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 41 | 41 | B.1.616 | 1 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 38 | 38 | AY.75 | 0.002129 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 32 | 34 | AY.102 | 0.000848 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 31 | 31 | AY.39.1 | 0.001228 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 29 | 29 | AY.3 | 0.000288 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 28 | 29 | B.1.177 | 0.000369 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 28 | 28 | B.1.1.214 | 0.001553 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 27 | 27 | B.1.429 | 0.000635 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 25 | 25 | B.1.526 | 0.000588 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 23 | 23 | B.1.258.17 | 0.002391 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 22 | 22 | B.1.36 | 0.00321 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 22 | 22 | L.3 | 0.078014 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 20 | 20 | AY.47 | 0.000622 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 20 | 20 | AY.98.1 | 0.000969 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 20 | 20 | B.1.1.70 | 0.006821 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 17 | 17 | B.1.1.519 | 0.000675 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 15 | 15 | AY.113 | 0.002136 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 14 | 14 | AY.24 | 0.006034 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 13 | 14 | B.1.1.318 | 0.003923 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 14 | 14 | B.1.351.5 | 0.008393 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 11 | 11 | B.1.1.368 | 0.033951 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 10 | AY.39 | 0.000222 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 10 | 10 | B.1.240 | 0.002156 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 10 | 10 | B.1.258 | 0.000665 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 9 | AY.105 | 0.005788 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 9 | AY.86 | 0.007469 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 8 | 9 | B.1.160 | 0.00025 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 9 | B.1.351 | 0.000268 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 9 | B.1.525 | 0.000679 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 9 | B.1.609 | 0.004314 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 9 | 9 | R.1 | 0.00081 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 7 | 8 | AY.118 | 0.000439 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 8 | 8 | AY.36 | 0.001186 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 8 | 8 | AY.9 | 0.000541 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 8 | 8 | B.1.568 | 0.008889 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 8 | P.2 | 0.00112 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 7 | 7 | B.1.582 | 0.003435 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | AY.7.2 | 0.003356 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | B.1.177.7 | 0.000989 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | B.1.637 | 0.000438 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 6 | C.37 | 0.00058 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 6 | D.2 | 0.0003 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 6 | 6 | Q.3 | 0.00087 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | AY.116.1 | 0.001557 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 5 | AY.117 | 0.000338 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | B.1.1.189 | 0.007564 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | B.1.1.192 | 0.011547 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | B.1.1.397 | 0.011261 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 5 | 5 | B.1.551 | 0.006452 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | B.1.177.12 | 0.000607 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | B.1.369 | 0.001141 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 3 | AY.42 | 0.00008 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AY.91 | 0.002191 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 3 | AY.98 | 0.000158 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | AZ.2 | 0.002463 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | B.1.1.134 | 0.034091 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | B.1.346 | 0.003932 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | B.1.574 | 0.006452 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 2 | B.1.1.306 | 0.000438 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.1.416 | 0.00181 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.1.462 | 0.017241 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.223 | 0.005556 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.36.1 | 0.002281 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.36.27 | 0.001527 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.560 | 0.009259 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.605 | 0.011905 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | B.1.88.1 | 0.009615 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.229 | 0.005747 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.160.28 | 0.002924 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.188 | 0.016667 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.221.4 | 0.004167 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.379 | 0.017241 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp2 | 390 | L390L | Cta | Tta | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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