CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 39 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp239L39LL219LsynctGctC11141350.00314155920-922

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp239L39LctGctC3511141All0.000007
ORF1ab/nsp239L39LctGctC11898B.1.1.70.000001
ORF1ab/nsp239L39LctGctC3411B.1.617.20.000011
ORF1ab/nsp239L39LctGctC13266P.10.000205
ORF1ab/nsp239L39LctGctC249AY.1020.000053
ORF1ab/nsp239L39LctGctC944B.1.6210.000797
ORF1ab/nsp239L39LctGctC111AY.420.00004
ORF1ab/nsp239L39LctGctC211AY.450.000243
ORF1ab/nsp239L39LctGctC17AY.340.000097
ORF1ab/nsp239L39LctGctC27AY.460.000208
ORF1ab/nsp239L39LctGctC11B.1.5310.083333