CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 39 & Codon = Ttg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp239L39LL219LsynCtgTtg1114167250.603626920-922

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp239L39LCtgTtg672511141All0.001286
ORF1ab/nsp239L39LCtgTtg16571898B.1.1.70.001483
ORF1ab/nsp239L39LCtgTtg416627AY.40.000647
ORF1ab/nsp239L39LCtgTtg559561D.20.041948
ORF1ab/nsp239L39LCtgTtg370418AY.440.002252
ORF1ab/nsp239L39LCtgTtg124411B.1.617.20.000467
ORF1ab/nsp239L39LCtgTtg385403B.1.4290.009059
ORF1ab/nsp239L39LCtgTtg3323B.1.360.000438
ORF1ab/nsp239L39LCtgTtg240318AY.1030.00149
ORF1ab/nsp239L39LCtgTtg47266P.10.00074
ORF1ab/nsp239L39LCtgTtg8250AY.98.10.000387
ORF1ab/nsp239L39LCtgTtg246248B.1.2580.016371
ORF1ab/nsp239L39LCtgTtg187228B.1.20.001647
ORF1ab/nsp239L39LCtgTtg188212B.1.1770.002476
ORF1ab/nsp239L39LCtgTtg212212B.1.4480.55643
ORF1ab/nsp239L39LCtgTtg128179B.10.001172
ORF1ab/nsp239L39LCtgTtg151159AY.1200.005614
ORF1ab/nsp239L39LCtgTtg102141AY.30.001015
ORF1ab/nsp239L39LCtgTtg101117B.1.6370.00738
ORF1ab/nsp239L39LCtgTtg63115AY.430.000279
ORF1ab/nsp239L39LCtgTtg27114B.1.5960.002353
ORF1ab/nsp239L39LCtgTtg74102B.1.10.001342
ORF1ab/nsp239L39LCtgTtg6773B.1.1600.00209
ORF1ab/nsp239L39LCtgTtg6771AY.200.002604
ORF1ab/nsp239L39LCtgTtg366B.1.1.2140.000166
ORF1ab/nsp239L39LCtgTtg6465B.1.6090.030681
ORF1ab/nsp239L39LCtgTtg6062C.160.063627
ORF1ab/nsp239L39LCtgTtg2955AY.390.000717
ORF1ab/nsp239L39LCtgTtg3554AY.39.10.001386
ORF1ab/nsp239L39LCtgTtg5252B.1.438.21
ORF1ab/nsp239L39LCtgTtg3751AY.250.000223
ORF1ab/nsp239L39LCtgTtg3850B.1.5260.000893
ORF1ab/nsp239L39LCtgTtg1749AY.1020.000451
ORF1ab/nsp239L39LCtgTtg2949AY.99.20.002673
ORF1ab/nsp239L39LCtgTtg4448AY.470.001369
ORF1ab/nsp239L39LCtgTtg3244B.1.6210.002833
ORF1ab/nsp239L39LCtgTtg1741Q.30.002466
ORF1ab/nsp239L39LCtgTtg3339AY.50.000681
ORF1ab/nsp239L39LCtgTtg1138AY.1000.000506
ORF1ab/nsp239L39LCtgTtg3637AY.360.005336
ORF1ab/nsp239L39LCtgTtg2635AY.260.000736
ORF1ab/nsp239L39LCtgTtg134AY.9.10.000084
ORF1ab/nsp239L39LCtgTtg3434B.1.258.140.033333
ORF1ab/nsp239L39LCtgTtg433AY.290.000063
ORF1ab/nsp239L39LCtgTtg2733B.1.3510.000803
ORF1ab/nsp239L39LCtgTtg2230AY.610.002305
ORF1ab/nsp239L39LCtgTtg3030B.1.2430.002088
ORF1ab/nsp239L39LCtgTtg429AY.330.000267
ORF1ab/nsp239L39LCtgTtg2428B.1.2210.001705
ORF1ab/nsp239L39LCtgTtg1026B.1.1.5190.000397
ORF1ab/nsp239L39LCtgTtg1726B.1.4270.000858
ORF1ab/nsp239L39LCtgTtg2424AY.1130.003417
ORF1ab/nsp239L39LCtgTtg122AY.1210.000135
ORF1ab/nsp239L39LCtgTtg1721AY.4.20.000369
ORF1ab/nsp239L39LCtgTtg1421P.1.140.000669
ORF1ab/nsp239L39LCtgTtg1717B.1.438.10.001823
ORF1ab/nsp239L39LCtgTtg1316B.1.1.280.004046
ORF1ab/nsp239L39LCtgTtg1315AY.75.10.002344
ORF1ab/nsp239L39LCtgTtg1415B.1.1.3170.005764
ORF1ab/nsp239L39LCtgTtg115B.1.1.4340.000349
ORF1ab/nsp239L39LCtgTtg314AY.230.000209
ORF1ab/nsp239L39LCtgTtg113AY.140.000088
ORF1ab/nsp239L39LCtgTtg1113AY.90.000744
ORF1ab/nsp239L39LCtgTtg413B.1.1.10.001307
ORF1ab/nsp239L39LCtgTtg1313B.1.4090.010156
ORF1ab/nsp239L39LCtgTtg312AY.9.20.00011
ORF1ab/nsp239L39LCtgTtg912B.1.2400.00194
ORF1ab/nsp239L39LCtgTtg1112B.1.4990.011555
ORF1ab/nsp239L39LCtgTtg111AY.1060.000335
ORF1ab/nsp239L39LCtgTtg511AY.420.000201
ORF1ab/nsp239L39LCtgTtg911AY.450.001095
ORF1ab/nsp239L39LCtgTtg1111AY.990.011542
ORF1ab/nsp239L39LCtgTtg111B.1.1.3060.000438
ORF1ab/nsp239L39LCtgTtg1011C.370.001161
ORF1ab/nsp239L39LCtgTtg1010B.1.6000.05848
ORF1ab/nsp239L39LCtgTtg39AY.29.10.000662
ORF1ab/nsp239L39LCtgTtg29B.1.177.440.001038
ORF1ab/nsp239L39LCtgTtg69B.1.3690.001711
ORF1ab/nsp239L39LCtgTtg19B.1.4700.001404
ORF1ab/nsp239L39LCtgTtg99C.230.052326
ORF1ab/nsp239L39LCtgTtg99P.1.150.002091
ORF1ab/nsp239L39LCtgTtg78AY.120.002212
ORF1ab/nsp239L39LCtgTtg88B.1.1.390.004077
ORF1ab/nsp239L39LCtgTtg68B.1.258.170.000624
ORF1ab/nsp239L39LCtgTtg77AD.20.001533
ORF1ab/nsp239L39LCtgTtg47AY.1190.000141
ORF1ab/nsp239L39LCtgTtg27AY.340.000194
ORF1ab/nsp239L39LCtgTtg17AY.460.000104
ORF1ab/nsp239L39LCtgTtg57AY.60.000206
ORF1ab/nsp239L39LCtgTtg57AY.750.00028
ORF1ab/nsp239L39LCtgTtg17B.1.2360.002053
ORF1ab/nsp239L39LCtgTtg67B.1.36.290.003104
ORF1ab/nsp239L39LCtgTtg67Q.10.000758
ORF1ab/nsp239L39LCtgTtg26AY.1180.000125
ORF1ab/nsp239L39LCtgTtg66AY.600.005629
ORF1ab/nsp239L39LCtgTtg66AY.70.001176
ORF1ab/nsp239L39LCtgTtg46B.1.4380.026144
ORF1ab/nsp239L39LCtgTtg66Q.80.000989
ORF1ab/nsp239L39LCtgTtg25AY.1170.000169
ORF1ab/nsp239L39LCtgTtg55B.1.1.1760.002197
ORF1ab/nsp239L39LCtgTtg25B.1.1.250.001137
ORF1ab/nsp239L39LCtgTtg45B.1.1.2770.003035
ORF1ab/nsp239L39LCtgTtg25B.1.1.2840.000215
ORF1ab/nsp239L39LCtgTtg45B.1.1.630.001543
ORF1ab/nsp239L39LCtgTtg55B.1.177.620.005959
ORF1ab/nsp239L39LCtgTtg45B.1.177.70.000659
ORF1ab/nsp239L39LCtgTtg55B.1.3110.001373
ORF1ab/nsp239L39LCtgTtg55B.1.90.030864
ORF1ab/nsp239L39LCtgTtg45C.360.003643
ORF1ab/nsp239L39LCtgTtg55P.1.70.001596
ORF1ab/nsp239L39LCtgTtg14AY.240.000431
ORF1ab/nsp239L39LCtgTtg34AY.3.10.000256
ORF1ab/nsp239L39LCtgTtg34B.1.1.2160.002671
ORF1ab/nsp239L39LCtgTtg44B.1.1.4280.037736
ORF1ab/nsp239L39LCtgTtg44B.1.1.4850.066667
ORF1ab/nsp239L39LCtgTtg44B.1.110.30.002874
ORF1ab/nsp239L39LCtgTtg24B.1.177.210.000153
ORF1ab/nsp239L39LCtgTtg44B.1.177.790.009368
ORF1ab/nsp239L39LCtgTtg44B.1.177.860.000734
ORF1ab/nsp239L39LCtgTtg44B.1.2650.005083
ORF1ab/nsp239L39LCtgTtg44B.1.5580.018265
ORF1ab/nsp239L39LCtgTtg34P.20.00056
ORF1ab/nsp239L39LCtgTtg23AY.1140.000462
ORF1ab/nsp239L39LCtgTtg33AY.1160.00086
ORF1ab/nsp239L39LCtgTtg13AY.130.000161
ORF1ab/nsp239L39LCtgTtg23AY.16.10.00094
ORF1ab/nsp239L39LCtgTtg33AY.270.000194
ORF1ab/nsp239L39LCtgTtg23AY.350.000466
ORF1ab/nsp239L39LCtgTtg33AY.4.2.10.000447
ORF1ab/nsp239L39LCtgTtg13AY.46.60.000072
ORF1ab/nsp239L39LCtgTtg23AY.5.30.000675
ORF1ab/nsp239L39LCtgTtg13AY.980.000079
ORF1ab/nsp239L39LCtgTtg33B.1.1.1870.026549
ORF1ab/nsp239L39LCtgTtg33B.1.1.3760.017857
ORF1ab/nsp239L39LCtgTtg33B.1.36.310.005254
ORF1ab/nsp239L39LCtgTtg23B.1.466.20.000782
ORF1ab/nsp239L39LCtgTtg23B.1.5950.000522
ORF1ab/nsp239L39LCtgTtg22AP.10.003003
ORF1ab/nsp239L39LCtgTtg22AY.120.20.002571
ORF1ab/nsp239L39LCtgTtg22AY.46.50.000397
ORF1ab/nsp239L39LCtgTtg22AY.620.000871
ORF1ab/nsp239L39LCtgTtg22AY.650.001066
ORF1ab/nsp239L39LCtgTtg22AY.680.000547
ORF1ab/nsp239L39LCtgTtg12AY.840.000437
ORF1ab/nsp239L39LCtgTtg22AY.950.001522
ORF1ab/nsp239L39LCtgTtg22B.1.1.1530.002191
ORF1ab/nsp239L39LCtgTtg12B.1.1.1890.001513
ORF1ab/nsp239L39LCtgTtg22B.1.1.2630.003115
ORF1ab/nsp239L39LCtgTtg12B.1.1.3110.000358
ORF1ab/nsp239L39LCtgTtg22B.1.1.3120.003824
ORF1ab/nsp239L39LCtgTtg22B.1.1.3150.016949
ORF1ab/nsp239L39LCtgTtg22B.1.1.3890.012121
ORF1ab/nsp239L39LCtgTtg22B.1.1.4660.017391
ORF1ab/nsp239L39LCtgTtg22B.1.1.500.001358
ORF1ab/nsp239L39LCtgTtg12B.1.1.540.003021
ORF1ab/nsp239L39LCtgTtg22B.1.1040.00738
ORF1ab/nsp239L39LCtgTtg22B.1.177.360.032258
ORF1ab/nsp239L39LCtgTtg22B.1.177.540.001213
ORF1ab/nsp239L39LCtgTtg22B.1.177.560.001335
ORF1ab/nsp239L39LCtgTtg22B.1.1950.01005
ORF1ab/nsp239L39LCtgTtg22B.1.3490.00143
ORF1ab/nsp239L39LCtgTtg22B.1.36.80.002
ORF1ab/nsp239L39LCtgTtg22B.1.3930.057143
ORF1ab/nsp239L39LCtgTtg22B.1.429.10.024096
ORF1ab/nsp239L39LCtgTtg12B.1.4800.002488
ORF1ab/nsp239L39LCtgTtg22B.1.5250.000226
ORF1ab/nsp239L39LCtgTtg12B.1.617.10.000129
ORF1ab/nsp239L39LCtgTtg22B.1.930.001867
ORF1ab/nsp239L39LCtgTtg12P.1.10.000318
ORF1ab/nsp239L39LCtgTtg22P.1.170.000324
ORF1ab/nsp239L39LCtgTtg11A.10.000282
ORF1ab/nsp239L39LCtgTtg11A.2.50.000499
ORF1ab/nsp239L39LCtgTtg11A.2.5.30.010309
ORF1ab/nsp239L39LCtgTtg11AY.1110.000183
ORF1ab/nsp239L39LCtgTtg11AY.280.00189
ORF1ab/nsp239L39LCtgTtg11AY.4.10.000737
ORF1ab/nsp239L39LCtgTtg11AY.4.40.000409
ORF1ab/nsp239L39LCtgTtg11AY.410.000294
ORF1ab/nsp239L39LCtgTtg11AY.480.000465
ORF1ab/nsp239L39LCtgTtg11AY.520.000814
ORF1ab/nsp239L39LCtgTtg11AY.550.000917
ORF1ab/nsp239L39LCtgTtg11AY.580.000907
ORF1ab/nsp239L39LCtgTtg11AY.730.000665
ORF1ab/nsp239L39LCtgTtg11AY.740.000116
ORF1ab/nsp239L39LCtgTtg11AY.850.000427
ORF1ab/nsp239L39LCtgTtg11AY.880.000884
ORF1ab/nsp239L39LCtgTtg11AY.91.10.004065
ORF1ab/nsp239L39LCtgTtg11AY.960.002075
ORF1ab/nsp239L39LCtgTtg11AZ.20.000821
ORF1ab/nsp239L39LCtgTtg11B.1.1.1280.007092
ORF1ab/nsp239L39LCtgTtg11B.1.1.1410.002012
ORF1ab/nsp239L39LCtgTtg11B.1.1.2100.005714
ORF1ab/nsp239L39LCtgTtg11B.1.1.2200.001859
ORF1ab/nsp239L39LCtgTtg11B.1.1.2790.001121
ORF1ab/nsp239L39LCtgTtg11B.1.1.3370.003597
ORF1ab/nsp239L39LCtgTtg11B.1.1.3560.008547
ORF1ab/nsp239L39LCtgTtg11B.1.1.3970.002252
ORF1ab/nsp239L39LCtgTtg11B.1.1.4140.142857
ORF1ab/nsp239L39LCtgTtg11B.1.1.710.006061
ORF1ab/nsp239L39LCtgTtg11B.1.1110.001175
ORF1ab/nsp239L39LCtgTtg11B.1.177.200.001517
ORF1ab/nsp239L39LCtgTtg11B.1.177.320.00135
ORF1ab/nsp239L39LCtgTtg11B.1.177.450.000381
ORF1ab/nsp239L39LCtgTtg11B.1.177.460.000918
ORF1ab/nsp239L39LCtgTtg11B.1.177.730.000566
ORF1ab/nsp239L39LCtgTtg11B.1.2120.016667
ORF1ab/nsp239L39LCtgTtg11B.1.2180.005155
ORF1ab/nsp239L39LCtgTtg11B.1.2510.021739
ORF1ab/nsp239L39LCtgTtg11B.1.264.10.047619
ORF1ab/nsp239L39LCtgTtg11B.1.3580.05
ORF1ab/nsp239L39LCtgTtg11B.1.36.10.00114
ORF1ab/nsp239L39LCtgTtg11B.1.36.170.000494
ORF1ab/nsp239L39LCtgTtg11B.1.3660.004878
ORF1ab/nsp239L39LCtgTtg11B.1.3980.002976
ORF1ab/nsp239L39LCtgTtg11B.1.4240.008065
ORF1ab/nsp239L39LCtgTtg11B.1.4390.005917
ORF1ab/nsp239L39LCtgTtg11B.1.466.10.007194
ORF1ab/nsp239L39LCtgTtg11B.1.5030.002488
ORF1ab/nsp239L39LCtgTtg11B.1.5050.004386
ORF1ab/nsp239L39LCtgTtg11B.1.5240.001406
ORF1ab/nsp239L39LCtgTtg11B.1.5440.006024
ORF1ab/nsp239L39LCtgTtg11B.1.5640.000426
ORF1ab/nsp239L39LCtgTtg11B.1.5820.000491
ORF1ab/nsp239L39LCtgTtg11B.1.5990.00365
ORF1ab/nsp239L39LCtgTtg11B.1.619.10.000641
ORF1ab/nsp239L39LCtgTtg11B.1.621.10.000506
ORF1ab/nsp239L39LCtgTtg11B.1.6230.000536
ORF1ab/nsp239L39LCtgTtg11B.400.000364
ORF1ab/nsp239L39LCtgTtg11B.500.111111
ORF1ab/nsp239L39LCtgTtg11N.50.001767