CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 388 | T388I | T568I | nonsyn | aCa | aTa | 5706 | 5706 | 1 | 1967-1969 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5706 | 5706 | All | 0.001091 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1127 | 1127 | B.1.1.7 | 0.001009 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 784 | 784 | AY.60 | 0.73546 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 329 | 329 | AY.4 | 0.000512 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 253 | 253 | B.1.1.369 | 0.112896 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 251 | 251 | B.1.429 | 0.005906 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 199 | 199 | AY.25 | 0.001197 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 150 | 150 | B.1.617.2 | 0.000565 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 149 | 149 | B.1.177 | 0.001962 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 123 | 123 | AY.103 | 0.000764 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 111 | 111 | AY.3 | 0.001104 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 109 | 109 | B.1.2 | 0.00096 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 89 | 89 | AY.44 | 0.000542 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 87 | 87 | B.1.1 | 0.001578 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 87 | 87 | C.16 | 0.092259 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 85 | 85 | B.1.427 | 0.004292 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 80 | 80 | B.1.117 | 1 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 78 | 78 | B.1 | 0.000714 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 73 | 73 | AY.43 | 0.000323 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 59 | 59 | B.1.1.50 | 0.040054 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 59 | 59 | B.1.177.54 | 0.035779 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 59 | 59 | P.1 | 0.000929 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 53 | 53 | B.1.36 | 0.007733 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 52 | 52 | B.1.243 | 0.003618 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 43 | 43 | B.1.258.17 | 0.004471 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 40 | 40 | AY.39.1.1 | 0.028986 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 37 | 37 | AY.102 | 0.000981 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 37 | 37 | AY.29 | 0.000584 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 35 | 35 | AY.4.4 | 0.014321 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 34 | 34 | AY.9.2 | 0.001249 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 34 | 34 | B.1.1.519 | 0.00135 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 34 | 34 | P.1.1 | 0.010801 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 30 | 30 | B.1.526 | 0.000705 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 29 | 29 | AD.2 | 0.00635 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 26 | 26 | AY.84 | 0.011374 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 25 | 25 | AY.59 | 0.013242 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 24 | 24 | AY.54 | 0.002288 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 23 | 23 | B.1.351 | 0.000684 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 21 | 21 | A.23.1 | 0.014789 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 19 | 19 | AY.75 | 0.001064 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 19 | 19 | B.1.160 | 0.000593 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 19 | 19 | B.1.525 | 0.00215 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 18 | 18 | AY.20 | 0.0007 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 18 | 18 | B.1.1.176 | 0.007909 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 16 | 16 | B.1.177.82 | 0.007637 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 16 | 16 | P.1.14 | 0.000765 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 15 | 15 | AY.14 | 0.00132 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 15 | 15 | AY.39 | 0.000371 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 15 | 15 | AY.4.2 | 0.000325 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 15 | 15 | AY.47 | 0.000467 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 14 | 14 | B.1.1.70 | 0.004775 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 14 | 14 | B.1.637 | 0.001023 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 13 | 13 | AY.5 | 0.000268 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 13 | 13 | AY.92 | 0.003735 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 13 | 13 | B.1.1.434 | 0.004531 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 13 | 13 | B.1.596 | 0.001133 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 13 | 13 | C.37 | 0.001509 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 12 | 12 | B.1.621 | 0.001062 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 11 | 11 | AY.39.1 | 0.000436 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 11 | 11 | B.1.1.274 | 0.055556 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 11 | 11 | B.1.177.73 | 0.006229 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 10 | 10 | AY.46.6 | 0.000722 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 10 | 10 | B.1.221 | 0.00071 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 9 | 9 | AY.116.1 | 0.002803 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 9 | 9 | AY.120 | 0.000335 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 9 | 9 | B.1.177.53 | 0.021531 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 8 | 8 | B.1.218 | 0.041237 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 8 | 8 | B.1.441 | 0.076923 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 8 | 8 | P.1.15 | 0.001859 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | AE.8 | 0.003423 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | AY.33 | 0.000467 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | B.1.1.222 | 0.001428 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 7 | 7 | B.1.575 | 0.002124 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | AY.90 | 0.004107 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | AY.93 | 0.001638 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | AY.99.2 | 0.000553 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | B.1.1.214 | 0.000333 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | B.1.369 | 0.001711 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | B.1.618 | 0.024194 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | P.6 | 0.018868 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | B.1.1.159 | 0.023364 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | B.1.1.294 | 0.006329 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 5 | 5 | B.1.634 | 0.017123 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | AY.116 | 0.001147 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | AY.120.1 | 0.001284 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | AY.29.1 | 0.000882 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | B | 0.000511 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | B.1.576 | 0.003626 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.58 | 0.002722 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.1.171 | 0.011029 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.1.317 | 0.001235 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.177.33 | 0.004934 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.177.60 | 0.000655 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.225 | 0.046154 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.36.17 | 0.001482 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.36.38 | 0.004926 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.411 | 0.011111 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.456 | 0.009804 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.465 | 0.011407 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.480 | 0.007463 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.1.184 | 0.117647 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.1.265 | 0.006309 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.1.279 | 0.002242 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.1.333 | 0.002153 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.177.62 | 0.002384 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.470 | 0.002809 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | B.1.619.1 | 0.001283 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 2 | 2 | Z.1 | 0.00578 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AM.4 | 0.003571 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.130 | 0.015385 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.148 | 0.008772 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.155 | 0.071429 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.166 | 0.008475 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.177.80 | 0.001912 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.221.1 | 0.002907 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.258.22 | 0.002667 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp2 | 388 | T388I | aCa | aTa | 1 | 1 | P.1.17 | 0.000162 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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