CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 388 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2388T388AT568AnonsynAcaGca11611611967-1969

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2388T388AAcaGca116116All0.000022
ORF1ab/nsp2388T388AAcaGca2626B.1.1.70.000023
ORF1ab/nsp2388T388AAcaGca1818B.1.617.20.000068
ORF1ab/nsp2388T388AAcaGca1313B.10.000119
ORF1ab/nsp2388T388AAcaGca1212AY.40.000019
ORF1ab/nsp2388T388AAcaGca99B.1.1.2840.000967
ORF1ab/nsp2388T388AAcaGca55AY.1030.000031
ORF1ab/nsp2388T388AAcaGca55B.1.3510.000149
ORF1ab/nsp2388T388AAcaGca44AY.30.00004
ORF1ab/nsp2388T388AAcaGca44B.1.4290.000094
ORF1ab/nsp2388T388AAcaGca33AY.390.000074
ORF1ab/nsp2388T388AAcaGca22AY.1020.000053
ORF1ab/nsp2388T388AAcaGca22AY.430.000009
ORF1ab/nsp2388T388AAcaGca22AY.450.000243
ORF1ab/nsp2388T388AAcaGca22B.1.5950.000522
ORF1ab/nsp2388T388AAcaGca11AY.16.10.00047
ORF1ab/nsp2388T388AAcaGca11AY.230.00007
ORF1ab/nsp2388T388AAcaGca11AY.75.10.00018
ORF1ab/nsp2388T388AAcaGca11AY.840.000437
ORF1ab/nsp2388T388AAcaGca11B.1.1.2940.001266
ORF1ab/nsp2388T388AAcaGca11B.1.20.000009
ORF1ab/nsp2388T388AAcaGca11B.1.258.170.000104
ORF1ab/nsp2388T388AAcaGca11P.10.000016
ORF1ab/nsp2388T388AAcaGca11P.1.150.000232