CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 380 & Codon = cCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2380R380PR560PnonsyncGtcCt47270.5744681943-1945

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2380R380PcGtcCt2747All0.000005
ORF1ab/nsp2380R380PcGtcCt1327B.10.000119
ORF1ab/nsp2380R380PcGtcCt66AY.1130.000854
ORF1ab/nsp2380R380PcGtcCt13B.1.1.10.000327
ORF1ab/nsp2380R380PcGtcCt13B.1.2580.000067
ORF1ab/nsp2380R380PcGtcCt13B.1.6090.000479
ORF1ab/nsp2380R380PcGtcCt22P.1.150.000465
ORF1ab/nsp2380R380PcGtcCt11AY.40.000002
ORF1ab/nsp2380R380PcGtcCt11B.1.1600.000031
ORF1ab/nsp2380R380PcGtcCt11B.1.20.000009