CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 367

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2367I367VI547VnonsynAttGtt9229210.9989151904-1906
ORF1ab/nsp2367I367VI547VnonsynAtTGtG92210.00108461904-1906
ORF1ab/nsp2367I367TI547TnonsynaTtaCt19019011904-1906
ORF1ab/nsp2367I367II547IsynatTatC1541190.7727271904-1906
ORF1ab/nsp2367I367II547IsynatTatA154350.2272731904-1906
ORF1ab/nsp2367I367LI547LnonsynAttCtt11511511904-1906
ORF1ab/nsp2367I367MI547MnonsynatTatG757511904-1906
ORF1ab/nsp2367I367delI547deldelATT---494911904-1906
ORF1ab/nsp2367I367SI547SnonsynaTtaGt282811904-1906
ORF1ab/nsp2367I367NI547NnonsynaTtaAt181811904-1906
ORF1ab/nsp2367I367FI547FnonsynAttTtt151511904-1906
ORF1ab/nsp2367I367del1I547del1delaTta-t650.8333331904-1906
ORF1ab/nsp2367I367del1I547del1delAtt-tt610.1666671904-1906
ORF1ab/nsp2367I367del2I547del2delaTTa--320.6666671904-1906
ORF1ab/nsp2367I367del2I547del2delATt--t310.3333331904-1906
ORF1ab/nsp2367I367PI547PnonsynATtCCt1111904-1906

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2367I367VAttGtt921922All0.000176
ORF1ab/nsp2367I367VAtTGtG1922All0
ORF1ab/nsp2367I367VAttGtt260260AY.40.000405
ORF1ab/nsp2367I367TaTtaCt190190All0.000036
ORF1ab/nsp2367I367VAttGtt171171AY.250.001029
ORF1ab/nsp2367I367IatTatC119154All0.000023
ORF1ab/nsp2367I367IatTatA35154All0.000007
ORF1ab/nsp2367I367VAttGtt123123B.1.5240.172996
ORF1ab/nsp2367I367LAttCtt115115All0.000022
ORF1ab/nsp2367I367VAttGtt9797B.520.979798
ORF1ab/nsp2367I367VAttGtt7676B.1.5960.006623
ORF1ab/nsp2367I367MatTatG7575All0.000014
ORF1ab/nsp2367I367MatTatG5757AY.40.000089
ORF1ab/nsp2367I367TaTtaCt5757B.1.1.70.000051
ORF1ab/nsp2367I367IatTatC3557B.1.1.70.000031
ORF1ab/nsp2367I367IatTatA2257B.1.1.70.00002
ORF1ab/nsp2367I367delATT---4949All0.000009
ORF1ab/nsp2367I367VAttGtt4949B.1.1.70.000044
ORF1ab/nsp2367I367LAttCtt4141B.1.1.5190.001628
ORF1ab/nsp2367I367VAttGtt3636B.1.20.000317
ORF1ab/nsp2367I367IatTatC3030AY.740.003469
ORF1ab/nsp2367I367SaTtaGt2828All0.000005
ORF1ab/nsp2367I367TaTtaCt2525B.1.5260.000588
ORF1ab/nsp2367I367VAttGtt2020AY.4.20.000434
ORF1ab/nsp2367I367NaTtaAt1818All0.000003
ORF1ab/nsp2367I367FAttTtt1515All0.000003
ORF1ab/nsp2367I367TaTtaCt1414AY.40.000022
ORF1ab/nsp2367I367LAttCtt1313AY.430.000058
ORF1ab/nsp2367I367TaTtaCt1313B.10.000119
ORF1ab/nsp2367I367VAttGtt1212B.1.617.20.000045
ORF1ab/nsp2367I367VAttGtt1111B.10.000101
ORF1ab/nsp2367I367TaTtaCt1010AY.1030.000062
ORF1ab/nsp2367I367TaTtaCt1010AY.430.000044
ORF1ab/nsp2367I367delATT---1010B.1.1.70.000009
ORF1ab/nsp2367I367NaTtaAt1010B.1.20.000088
ORF1ab/nsp2367I367IatTatC710B.1.617.20.000026
ORF1ab/nsp2367I367IatTatA310B.1.617.20.000011
ORF1ab/nsp2367I367IatTatC1010P.1.10.003177
ORF1ab/nsp2367I367TaTtaCt88B.1.1.2770.00607
ORF1ab/nsp2367I367LAttCtt88B.1.617.20.00003
ORF1ab/nsp2367I367TaTtaCt77AY.30.00007
ORF1ab/nsp2367I367VAttGtt77AY.430.000031
ORF1ab/nsp2367I367VAttGtt77B.1.2580.000466
ORF1ab/nsp2367I367del1aTta-t56All0.000001
ORF1ab/nsp2367I367del1Att-tt16All0
ORF1ab/nsp2367I367VAttGtt66AY.1030.000037
ORF1ab/nsp2367I367LAttCtt66AY.420.000241
ORF1ab/nsp2367I367IatTatC56AY.430.000022
ORF1ab/nsp2367I367IatTatA16AY.430.000004
ORF1ab/nsp2367I367IatTatC66B.1.20.000053
ORF1ab/nsp2367I367VAttGtt66P.1.70.001916
ORF1ab/nsp2367I367SaTtaGt55AY.3.10.000426
ORF1ab/nsp2367I367LAttCtt55AY.4.50.000537
ORF1ab/nsp2367I367SaTtaGt55B.10.000046
ORF1ab/nsp2367I367MatTatG55B.1.1.70.000004
ORF1ab/nsp2367I367LAttCtt55B.1.1.70.000004
ORF1ab/nsp2367I367VAttGtt55B.1.3770.022831
ORF1ab/nsp2367I367VAttGtt44AY.390.000099
ORF1ab/nsp2367I367LAttCtt44AY.40.000006
ORF1ab/nsp2367I367MatTatG44AY.440.000024
ORF1ab/nsp2367I367VAttGtt34B0.000383
ORF1ab/nsp2367I367VAtTGtG14B0.000128
ORF1ab/nsp2367I367FAttTtt44B.10.000037
ORF1ab/nsp2367I367delATT---44B.1.1.330.001684
ORF1ab/nsp2367I367TaTtaCt44B.1.1.4260.142857
ORF1ab/nsp2367I367delATT---44B.1.1770.000053
ORF1ab/nsp2367I367TaTtaCt44B.1.20.000035
ORF1ab/nsp2367I367del2aTTa--23All0
ORF1ab/nsp2367I367del2ATt--t13All0
ORF1ab/nsp2367I367IatTatA23AY.1030.000012
ORF1ab/nsp2367I367IatTatC13AY.1030.000006
ORF1ab/nsp2367I367TaTtaCt33AY.250.000018
ORF1ab/nsp2367I367TaTtaCt33AY.260.000085
ORF1ab/nsp2367I367LAttCtt33AY.4.10.002212
ORF1ab/nsp2367I367delATT---33B.10.000027
ORF1ab/nsp2367I367NaTtaAt33B.1.1.2840.000322
ORF1ab/nsp2367I367delATT---33B.1.1.3480.002389
ORF1ab/nsp2367I367FAttTtt33B.1.1.70.000003
ORF1ab/nsp2367I367VAttGtt33B.1.4290.000071
ORF1ab/nsp2367I367SaTtaGt33B.1.617.20.000011
ORF1ab/nsp2367I367TaTtaCt33P.10.000047
ORF1ab/nsp2367I367LAttCtt33P.1.10.000953
ORF1ab/nsp2367I367IatTatC22A.20.001324
ORF1ab/nsp2367I367SaTtaGt22AY.1000.000092
ORF1ab/nsp2367I367IatTatC22AY.1020.000053
ORF1ab/nsp2367I367TaTtaCt22AY.1190.000071
ORF1ab/nsp2367I367IatTatC22AY.230.000139
ORF1ab/nsp2367I367LAttCtt22AY.250.000012
ORF1ab/nsp2367I367TaTtaCt22AY.290.000032
ORF1ab/nsp2367I367IatTatC22AY.30.00002
ORF1ab/nsp2367I367SaTtaGt22AY.330.000134
ORF1ab/nsp2367I367LAttCtt22AY.390.000049
ORF1ab/nsp2367I367IatTatC22AY.40.000003
ORF1ab/nsp2367I367delATT---22AY.40.000003
ORF1ab/nsp2367I367TaTtaCt22AY.4.20.000043
ORF1ab/nsp2367I367delATT---22AY.4.50.000215
ORF1ab/nsp2367I367LAttCtt22AY.440.000012
ORF1ab/nsp2367I367VAttGtt22AY.440.000012
ORF1ab/nsp2367I367IatTatC22AY.450.000243
ORF1ab/nsp2367I367LAttCtt22B.10.000018
ORF1ab/nsp2367I367IatTatA22B.1.1770.000026
ORF1ab/nsp2367I367del2aTTa--22B.1.20.000018
ORF1ab/nsp2367I367VAttGtt22B.1.2080.08
ORF1ab/nsp2367I367IatTatC22B.1.2580.000133
ORF1ab/nsp2367I367VAttGtt22B.1.3510.000059
ORF1ab/nsp2367I367IatTatC22B.1.3510.000059
ORF1ab/nsp2367I367LAttCtt22B.1.3510.000059
ORF1ab/nsp2367I367delATT---22B.1.4240.016129
ORF1ab/nsp2367I367TaTtaCt22B.1.4500.022727
ORF1ab/nsp2367I367LAttCtt22B.1.5250.000226
ORF1ab/nsp2367I367FAttTtt22B.1.617.20.000008
ORF1ab/nsp2367I367TaTtaCt22B.1.617.20.000008
ORF1ab/nsp2367I367MatTatG22B.1.617.20.000008
ORF1ab/nsp2367I367del1aTta-t22B.1.6270.00404
ORF1ab/nsp2367I367TaTtaCt22N.30.011628
ORF1ab/nsp2367I367delATT---22N.60.014184
ORF1ab/nsp2367I367MatTatG22P.10.000032
ORF1ab/nsp2367I367delATT---22P.20.000373
ORF1ab/nsp2367I367VAttGtt22R.10.00018
ORF1ab/nsp2367I367PATtCCt11All0
ORF1ab/nsp2367I367VAttGtt11AY.1020.000027
ORF1ab/nsp2367I367SaTtaGt11AY.1020.000027
ORF1ab/nsp2367I367TaTtaCt11AY.1020.000027
ORF1ab/nsp2367I367LAttCtt11AY.1030.000006
ORF1ab/nsp2367I367LAttCtt11AY.1060.000335
ORF1ab/nsp2367I367VAttGtt11AY.1090.00074
ORF1ab/nsp2367I367delATT---11AY.1110.000183
ORF1ab/nsp2367I367LAttCtt11AY.116.10.000311
ORF1ab/nsp2367I367SaTtaGt11AY.1170.000085
ORF1ab/nsp2367I367VAttGtt11AY.1190.000035
ORF1ab/nsp2367I367VAttGtt11AY.120.000316
ORF1ab/nsp2367I367MatTatG11AY.1200.000037
ORF1ab/nsp2367I367TaTtaCt11AY.130.000161
ORF1ab/nsp2367I367TaTtaCt11AY.190.00114
ORF1ab/nsp2367I367MatTatG11AY.200.000039
ORF1ab/nsp2367I367TaTtaCt11AY.200.000039
ORF1ab/nsp2367I367LAttCtt11AY.23.10.000417
ORF1ab/nsp2367I367delATT---11AY.250.000006
ORF1ab/nsp2367I367SaTtaGt11AY.250.000006
ORF1ab/nsp2367I367IatTatC11AY.260.000028
ORF1ab/nsp2367I367VAttGtt11AY.30.00001
ORF1ab/nsp2367I367NaTtaAt11AY.3.10.000085
ORF1ab/nsp2367I367del2ATt--t11AY.330.000067
ORF1ab/nsp2367I367VAttGtt11AY.340.000097
ORF1ab/nsp2367I367LAttCtt11AY.34.10.00051
ORF1ab/nsp2367I367VAttGtt11AY.360.000148
ORF1ab/nsp2367I367IatTatC11AY.390.000025
ORF1ab/nsp2367I367SaTtaGt11AY.40.000002
ORF1ab/nsp2367I367delATT---11AY.430.000004
ORF1ab/nsp2367I367IatTatA11AY.440.000006
ORF1ab/nsp2367I367TaTtaCt11AY.440.000006
ORF1ab/nsp2367I367NaTtaAt11AY.440.000006
ORF1ab/nsp2367I367delATT---11AY.440.000006
ORF1ab/nsp2367I367del1aTta-t11AY.440.000006
ORF1ab/nsp2367I367LAttCtt11AY.450.000122
ORF1ab/nsp2367I367VAttGtt11AY.46.60.000072
ORF1ab/nsp2367I367LAttCtt11AY.46.60.000072
ORF1ab/nsp2367I367TaTtaCt11AY.470.000031
ORF1ab/nsp2367I367VAttGtt11AY.470.000031
ORF1ab/nsp2367I367SaTtaGt11AY.610.000105
ORF1ab/nsp2367I367LAttCtt11AY.620.000436
ORF1ab/nsp2367I367delATT---11AY.660.00107
ORF1ab/nsp2367I367VAttGtt11AY.690.000187
ORF1ab/nsp2367I367SaTtaGt11AY.840.000437
ORF1ab/nsp2367I367LAttCtt11AY.890.004902
ORF1ab/nsp2367I367TaTtaCt11AY.90.000068
ORF1ab/nsp2367I367TaTtaCt11AY.98.10.000048
ORF1ab/nsp2367I367LAttCtt11AY.98.10.000048
ORF1ab/nsp2367I367del1aTta-t11B.10.000009
ORF1ab/nsp2367I367IatTatC11B.10.000009
ORF1ab/nsp2367I367NaTtaAt11B.10.000009
ORF1ab/nsp2367I367LAttCtt11B.1.10.000018
ORF1ab/nsp2367I367TaTtaCt11B.1.10.000018
ORF1ab/nsp2367I367VAttGtt11B.1.10.000018
ORF1ab/nsp2367I367MatTatG11B.1.10.000018
ORF1ab/nsp2367I367FAttTtt11B.1.1.10.000327
ORF1ab/nsp2367I367NaTtaAt11B.1.1.1570.000913
ORF1ab/nsp2367I367VAttGtt11B.1.1.2220.000204
ORF1ab/nsp2367I367TaTtaCt11B.1.1.280.000311
ORF1ab/nsp2367I367SaTtaGt11B.1.1.280.000311
ORF1ab/nsp2367I367delATT---11B.1.1.2840.000107
ORF1ab/nsp2367I367delATT---11B.1.1.4160.000905
ORF1ab/nsp2367I367SaTtaGt11B.1.1.500.000679
ORF1ab/nsp2367I367SaTtaGt11B.1.1.70.000001
ORF1ab/nsp2367I367VAttGtt11B.1.1160.011628
ORF1ab/nsp2367I367LAttCtt11B.1.1420.002899
ORF1ab/nsp2367I367MatTatG11B.1.1600.000031
ORF1ab/nsp2367I367LAttCtt11B.1.1600.000031
ORF1ab/nsp2367I367IatTatC11B.1.1600.000031
ORF1ab/nsp2367I367LAttCtt11B.1.1770.000013
ORF1ab/nsp2367I367TaTtaCt11B.1.1770.000013
ORF1ab/nsp2367I367FAttTtt11B.1.1770.000013
ORF1ab/nsp2367I367LAttCtt11B.1.177.120.000152
ORF1ab/nsp2367I367TaTtaCt11B.1.177.40.000211
ORF1ab/nsp2367I367IatTatC11B.1.177.40.000211
ORF1ab/nsp2367I367delATT---11B.1.177.540.000606
ORF1ab/nsp2367I367VAttGtt11B.1.177.60.000977
ORF1ab/nsp2367I367TaTtaCt11B.1.177.810.000189
ORF1ab/nsp2367I367del1aTta-t11B.1.20.000009
ORF1ab/nsp2367I367SaTtaGt11B.1.2430.00007
ORF1ab/nsp2367I367FAttTtt11B.1.2580.000067
ORF1ab/nsp2367I367MatTatG11B.1.258.140.00098
ORF1ab/nsp2367I367IatTatC11B.1.3140.007519
ORF1ab/nsp2367I367TaTtaCt11B.1.3510.00003
ORF1ab/nsp2367I367VAttGtt11B.1.360.000146
ORF1ab/nsp2367I367IatTatC11B.1.360.000146
ORF1ab/nsp2367I367delATT---11B.1.360.000146
ORF1ab/nsp2367I367TaTtaCt11B.1.36.310.001751
ORF1ab/nsp2367I367VAttGtt11B.1.3620.001541
ORF1ab/nsp2367I367TaTtaCt11B.1.3690.000285
ORF1ab/nsp2367I367VAttGtt11B.1.3690.000285
ORF1ab/nsp2367I367delATT---11B.1.4290.000024
ORF1ab/nsp2367I367IatTatA11B.1.4290.000024
ORF1ab/nsp2367I367delATT---11B.1.4390.005917
ORF1ab/nsp2367I367SaTtaGt11B.1.5260.000024
ORF1ab/nsp2367I367delATT---11B.1.5610.000397
ORF1ab/nsp2367I367PATtCCt11B.1.617.10.000129
ORF1ab/nsp2367I367IatTatC11B.1.6230.000536
ORF1ab/nsp2367I367IatTatA11B.1.910.002075
ORF1ab/nsp2367I367FAttTtt11B.40.002208
ORF1ab/nsp2367I367delATT---11B.570.015152
ORF1ab/nsp2367I367FAttTtt11B.60.00091
ORF1ab/nsp2367I367IatTatA11C.1.20.004255
ORF1ab/nsp2367I367TaTtaCt11C.370.000116
ORF1ab/nsp2367I367FAttTtt11D.20.000075
ORF1ab/nsp2367I367IatTatC11P.10.000016
ORF1ab/nsp2367I367delATT---11P.10.000016
ORF1ab/nsp2367I367del1Att-tt11P.1.170.000162
ORF1ab/nsp2367I367NaTtaAt11P.20.000187
ORF1ab/nsp2367I367delATT---11Q.10.000126
ORF1ab/nsp2367I367IatTatA11Z.10.00289