CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 339 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2339G339VG519VnonsyngGtgTt3293280.996961820-1822

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2339G339VgGtgTt328329All0.000063
ORF1ab/nsp2339G339VgGtgTt205205B.1.1.70.000184
ORF1ab/nsp2339G339VgGtgTt2929AY.1200.001078
ORF1ab/nsp2339G339VgGtgTt1616AY.1030.000099
ORF1ab/nsp2339G339VgGtgTt880.444444
ORF1ab/nsp2339G339VgGtgTt77B.6.60.006222
ORF1ab/nsp2339G339VgGtgTt66AY.1020.000159
ORF1ab/nsp2339G339VgGtgTt66AY.250.000036
ORF1ab/nsp2339G339VgGtgTt55B.1.617.20.000019
ORF1ab/nsp2339G339VgGtgTt44AY.30.00004
ORF1ab/nsp2339G339VgGtgTt44AY.40.000006
ORF1ab/nsp2339G339VgGtgTt33AY.4.50.000322
ORF1ab/nsp2339G339VgGtgTt23AY.440.000012
ORF1ab/nsp2339G339VgGtgTt33B.1.10.000054
ORF1ab/nsp2339G339VgGtgTt33B.1.20.000026
ORF1ab/nsp2339G339VgGtgTt22AY.1000.000092
ORF1ab/nsp2339G339VgGtgTt22AY.4.20.000043
ORF1ab/nsp2339G339VgGtgTt22AY.610.00021
ORF1ab/nsp2339G339VgGtgTt22P.10.000032
ORF1ab/nsp2339G339VgGtgTt11AY.120.20.001285
ORF1ab/nsp2339G339VgGtgTt11AY.120.2.10.000498
ORF1ab/nsp2339G339VgGtgTt11AY.160.00038
ORF1ab/nsp2339G339VgGtgTt11AY.180.010101
ORF1ab/nsp2339G339VgGtgTt11AY.290.000016
ORF1ab/nsp2339G339VgGtgTt11AY.320.000532
ORF1ab/nsp2339G339VgGtgTt11AY.340.000097
ORF1ab/nsp2339G339VgGtgTt11AY.46.40.000165
ORF1ab/nsp2339G339VgGtgTt11AY.470.000031
ORF1ab/nsp2339G339VgGtgTt11AY.590.00053
ORF1ab/nsp2339G339VgGtgTt11AY.70.000196
ORF1ab/nsp2339G339VgGtgTt11B.10.000009
ORF1ab/nsp2339G339VgGtgTt11B.1.1.2220.000204
ORF1ab/nsp2339G339VgGtgTt11B.1.1.3060.000438
ORF1ab/nsp2339G339VgGtgTt11B.1.1770.000013
ORF1ab/nsp2339G339VgGtgTt11B.1.2430.00007
ORF1ab/nsp2339G339VgGtgTt11B.1.5960.000087
ORF1ab/nsp2339G339VgGtgTt11C.370.000116
ORF1ab/nsp2339G339VgGtgTt11P.1.140.000048