CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 336 | A336V | A516V | nonsyn | gCt | gTt | 4463 | 4457 | 0.998656 | 1811-1813 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4457 | 4463 | All | 0.000852 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 948 | 948 | B.1.1.7 | 0.000849 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 337 | 337 | AY.4 | 0.000525 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 251 | 251 | B.1 | 0.002299 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 213 | 213 | AY.43 | 0.000944 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 207 | 207 | AY.41 | 0.060847 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 206 | 206 | B.1.2 | 0.001814 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 202 | 202 | B.1.1.397 | 0.454955 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 180 | 180 | B.1.1.284 | 0.019332 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 163 | 163 | B.1.617.2 | 0.000614 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 137 | 137 | B.1.595.4 | 1 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 121 | 121 | B.1.1 | 0.002195 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 104 | 104 | AY.44 | 0.000633 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 92 | 92 | P.1 | 0.001449 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 80 | 80 | AY.25 | 0.000481 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 65 | 65 | AY.103 | 0.000404 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 65 | 65 | B.1.429 | 0.001529 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 57 | 57 | B.1.177 | 0.000751 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 56 | 56 | AY.29 | 0.000883 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 48 | 48 | B.1.243 | 0.00334 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 44 | 44 | B.1.1.418 | 1 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 34 | 34 | AY.99.2 | 0.003133 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 30 | 30 | AY.4.5 | 0.003225 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 30 | 30 | C.36 | 0.027322 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 29 | 29 | AY.3 | 0.000288 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 29 | 29 | AY.39 | 0.000717 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 29 | 29 | C.37 | 0.003366 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 26 | 26 | B.1.1.316 | 0.024052 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 25 | 25 | AY.117 | 0.002113 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 22 | 22 | AY.2 | 0.007835 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 22 | 22 | B.1.427 | 0.001111 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 21 | 21 | AY.85 | 0.008971 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 21 | 21 | B.1.177.81 | 0.003976 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 18 | 18 | AY.102 | 0.000477 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 15 | 15 | AY.100 | 0.00069 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 15 | 15 | B.1.160 | 0.000468 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 14 | 14 | P.1.14 | 0.000669 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 13 | 13 | AY.26 | 0.000368 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 12 | 12 | AY.4.2 | 0.00026 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 12 | 12 | B.1.1.519 | 0.000477 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 12 | 12 | P.2 | 0.00224 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 11 | 11 | B.1.1.176 | 0.004833 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 10 | 10 | AY.120 | 0.000372 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | AY.35 | 0.001864 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | AY.61 | 0.000838 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | B.1.1.222 | 0.001632 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | B.1.1.63 | 0.003086 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 8 | 8 | D.2 | 0.0006 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 7 | 7 | AY.6 | 0.000288 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 7 | 7 | B.1.36.29 | 0.003621 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 7 | 7 | B.1.426 | 0.007064 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | AY.34 | 0.000582 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | AY.42 | 0.000241 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | AY.79 | 0.007264 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.177.86 | 0.001101 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.234 | 0.000792 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.575 | 0.00182 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 5 | 5 | B.1.1.170 | 0.006234 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 5 | 5 | B.1.177.4 | 0.001055 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 5 | 5 | B.1.582 | 0.002453 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | A | 0.001548 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | AY.14 | 0.000352 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | AY.46.3 | 0.003735 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | AY.9.1 | 0.000335 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.1.370 | 0.050633 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.160.9 | 0.028777 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.214.3 | 0.028571 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.626 | 0.022857 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | B.1.9.5 | 0.022727 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | A.2.2 | 0.005068 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 3 | AY.16.1 | 0.00094 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 3 | AY.47 | 0.000062 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.1.161 | 0.010601 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.1.304 | 0.008427 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.1.354 | 0.013158 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.1.525 | 0.016393 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.346 | 0.003932 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.36.35 | 0.007812 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 3 | 3 | B.6.6 | 0.002667 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.129 | 0.018349 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.153 | 0.002191 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.298 | 0.001724 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.322 | 0.017544 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.417 | 0.005405 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.1.523 | 0.003125 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.210 | 0.004264 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AN.1 | 0.02 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.280 | 0.003086 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.323 | 0.014085 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.424 | 0.045455 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.52 | 0.012195 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.1.8 | 0.003584 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.70 | 0.005917 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.74 | 0.015152 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.403 | 0.003268 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.591 | 0.010638 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.629 | 0.013333 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | P.1.8 | 0.004785 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 336 | A336V | gCt | gTt | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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