CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 325 & Codon = tTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2325S325FS505FnonsyntCctTc1064106411778-1780

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2325S325FtCctTc10641064All0.000204
ORF1ab/nsp2325S325FtCctTc193193B.1.1.70.000173
ORF1ab/nsp2325S325FtCctTc113113AY.4.20.002451
ORF1ab/nsp2325S325FtCctTc9999B.1.1.1810.45
ORF1ab/nsp2325S325FtCctTc9595AY.1030.00059
ORF1ab/nsp2325S325FtCctTc8888B.1.177.860.016144
ORF1ab/nsp2325S325FtCctTc4747B.1.617.20.000177
ORF1ab/nsp2325S325FtCctTc3939B.1.10.000707
ORF1ab/nsp2325S325FtCctTc3333B.10.000302
ORF1ab/nsp2325S325FtCctTc3131AY.40.000048
ORF1ab/nsp2325S325FtCctTc2828AY.390.000692
ORF1ab/nsp2325S325FtCctTc2222AY.440.000134
ORF1ab/nsp2325S325FtCctTc2020AY.840.008749
ORF1ab/nsp2325S325FtCctTc2020B.1.5960.001743
ORF1ab/nsp2325S325FtCctTc1717B.1.20.00015
ORF1ab/nsp2325S325FtCctTc1515AY.420.000603
ORF1ab/nsp2325S325FtCctTc1111AY.250.000066
ORF1ab/nsp2325S325FtCctTc99AY.30.00009
ORF1ab/nsp2325S325FtCctTc88AY.200.000311
ORF1ab/nsp2325S325FtCctTc88B.1.1770.000105
ORF1ab/nsp2325S325FtCctTc77AY.1190.000247
ORF1ab/nsp2325S325FtCctTc77AY.430.000031
ORF1ab/nsp2325S325FtCctTc77AY.750.000392
ORF1ab/nsp2325S325FtCctTc77B.1.1.2320.012704
ORF1ab/nsp2325S325FtCctTc66AY.1020.000159
ORF1ab/nsp2325S325FtCctTc66AY.260.00017
ORF1ab/nsp2325S325FtCctTc66AY.70.001176
ORF1ab/nsp2325S325FtCctTc66B.1.258.110.002378
ORF1ab/nsp2325S325FtCctTc55AY.450.000608
ORF1ab/nsp2325S325FtCctTc55B.1.1.5250.027322
ORF1ab/nsp2325S325FtCctTc55B.1.4290.000118
ORF1ab/nsp2325S325FtCctTc55P.10.000079
ORF1ab/nsp2325S325FtCctTc44A0.001548
ORF1ab/nsp2325S325FtCctTc44AY.1180.000251
ORF1ab/nsp2325S325FtCctTc44AY.290.000063
ORF1ab/nsp2325S325FtCctTc44B.1.4970.001259
ORF1ab/nsp2325S325FtCctTc33AY.540.000286
ORF1ab/nsp2325S325FtCctTc33AY.60.000123
ORF1ab/nsp2325S325FtCctTc33AY.9.10.000251
ORF1ab/nsp2325S325FtCctTc33AY.98.10.000145
ORF1ab/nsp2325S325FtCctTc33B.1.2430.000209
ORF1ab/nsp2325S325FtCctTc33B.1.3510.000089
ORF1ab/nsp2325S325FtCctTc33B.1.360.000438
ORF1ab/nsp2325S325FtCctTc33Q.30.000435
ORF1ab/nsp2325S325FtCctTc220.111111
ORF1ab/nsp2325S325FtCctTc22AP.10.003003
ORF1ab/nsp2325S325FtCctTc22AY.1170.000169
ORF1ab/nsp2325S325FtCctTc22AY.1200.000074
ORF1ab/nsp2325S325FtCctTc22AY.4.40.000818
ORF1ab/nsp2325S325FtCctTc22B0.000256
ORF1ab/nsp2325S325FtCctTc22B.1.1.5190.000079
ORF1ab/nsp2325S325FtCctTc22B.1.6230.001073
ORF1ab/nsp2325S325FtCctTc11AY.1070.000466
ORF1ab/nsp2325S325FtCctTc11AY.1130.000142
ORF1ab/nsp2325S325FtCctTc11AY.116.10.000311
ORF1ab/nsp2325S325FtCctTc11AY.120.10.000321
ORF1ab/nsp2325S325FtCctTc11AY.1210.000135
ORF1ab/nsp2325S325FtCctTc11AY.330.000067
ORF1ab/nsp2325S325FtCctTc11AY.39.10.00004
ORF1ab/nsp2325S325FtCctTc11AY.4.2.10.000149
ORF1ab/nsp2325S325FtCctTc11AY.460.000104
ORF1ab/nsp2325S325FtCctTc11AY.470.000031
ORF1ab/nsp2325S325FtCctTc11AY.510.000909
ORF1ab/nsp2325S325FtCctTc11AY.610.000105
ORF1ab/nsp2325S325FtCctTc11AY.690.000187
ORF1ab/nsp2325S325FtCctTc11AY.75.10.00018
ORF1ab/nsp2325S325FtCctTc11AY.90.000068
ORF1ab/nsp2325S325FtCctTc11AY.980.000079
ORF1ab/nsp2325S325FtCctTc11B.1.1.2190.005
ORF1ab/nsp2325S325FtCctTc11B.1.1.330.000421
ORF1ab/nsp2325S325FtCctTc11B.1.1.5260.003546
ORF1ab/nsp2325S325FtCctTc11B.1.1.700.000341
ORF1ab/nsp2325S325FtCctTc11B.1.177.60.000977
ORF1ab/nsp2325S325FtCctTc11B.1.2580.000067
ORF1ab/nsp2325S325FtCctTc11B.1.258.170.000104
ORF1ab/nsp2325S325FtCctTc11B.1.3110.000275
ORF1ab/nsp2325S325FtCctTc11B.1.3490.000715
ORF1ab/nsp2325S325FtCctTc11B.1.3690.000285
ORF1ab/nsp2325S325FtCctTc11B.1.438.10.000107
ORF1ab/nsp2325S325FtCctTc11B.1.466.20.000391
ORF1ab/nsp2325S325FtCctTc11B.1.5260.000024
ORF1ab/nsp2325S325FtCctTc11B.1.5410.004425
ORF1ab/nsp2325S325FtCctTc11B.1.5640.000426
ORF1ab/nsp2325S325FtCctTc11B.1.5750.000303
ORF1ab/nsp2325S325FtCctTc11B.1.575.10.002439
ORF1ab/nsp2325S325FtCctTc11C.180.002591
ORF1ab/nsp2325S325FtCctTc11C.300.001727
ORF1ab/nsp2325S325FtCctTc11C.360.000911
ORF1ab/nsp2325S325FtCctTc11C.36.3.10.002717
ORF1ab/nsp2325S325FtCctTc11D.20.000075
ORF1ab/nsp2325S325FtCctTc11P.1.140.000048
ORF1ab/nsp2325S325FtCctTc11P.1.150.000232