CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 308

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2308V308VV488VsyngtGgtA36992368290.9955941727-1729
ORF1ab/nsp2308V308VV488VsyngtGgtT369921590.004298231727-1729
ORF1ab/nsp2308V308VV488VsyngtGgtC3699240.0001081311727-1729
ORF1ab/nsp2308V308MV488MnonsynGtgAtg30530511727-1729
ORF1ab/nsp2308V308AV488AnonsyngTggCg24424411727-1729
ORF1ab/nsp2308V308LV488LnonsynGtgTtg1521490.9802631727-1729
ORF1ab/nsp2308V308LV488LnonsynGtgCtg15220.01315791727-1729
ORF1ab/nsp2308V308LV488LnonsynGtGTtA15210.006578951727-1729
ORF1ab/nsp2308V308delV488deldelGTG---393911727-1729
ORF1ab/nsp2308V308GV488GnonsyngTggGg1280.6666671727-1729
ORF1ab/nsp2308V308GV488GnonsyngTGgGC1220.1666671727-1729
ORF1ab/nsp2308V308GV488GnonsyngTGgGA1210.08333331727-1729
ORF1ab/nsp2308V308GV488GnonsyngTGgGT1210.08333331727-1729
ORF1ab/nsp2308V308EV488EnonsyngTggAg1190.8181821727-1729
ORF1ab/nsp2308V308EV488EnonsyngTGgAA1120.1818181727-1729
ORF1ab/nsp2308V308del1V488del1delgtGgt-630.51727-1729
ORF1ab/nsp2308V308del1V488del1delGtg-tg620.3333331727-1729
ORF1ab/nsp2308V308del1V488del1delgTGgC-610.1666671727-1729
ORF1ab/nsp2308V308FV488FnonsynGtGTtC540.81727-1729
ORF1ab/nsp2308V308XV488XnonsynGTgTAg530.61727-1729
ORF1ab/nsp2308V308DV488DnonsyngTGgAT530.61727-1729
ORF1ab/nsp2308V308DV488DnonsyngTGgAC520.41727-1729
ORF1ab/nsp2308V308XV488XnonsynGTGTGA510.21727-1729
ORF1ab/nsp2308V308XV488XnonsynGTGTAA510.21727-1729
ORF1ab/nsp2308V308FV488FnonsynGtGTtT510.21727-1729
ORF1ab/nsp2308V308CV488CnonsynGTGTGT420.51727-1729
ORF1ab/nsp2308V308CV488CnonsynGTGTGC420.51727-1729
ORF1ab/nsp2308V308WV488WnonsynGTgTGg3311727-1729
ORF1ab/nsp2308V308YV488YnonsynGTGTAC320.6666671727-1729
ORF1ab/nsp2308V308YV488YnonsynGTGTAT310.3333331727-1729
ORF1ab/nsp2308V308RV488RnonsynGTgAGg210.51727-1729
ORF1ab/nsp2308V308RV488RnonsynGTgCGg210.51727-1729
ORF1ab/nsp2308V308del2V488del2delGTG--A1111727-1729

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2308V308VgtGgtA3682936992All0.007044
ORF1ab/nsp2308V308VgtGgtT15936992All0.00003
ORF1ab/nsp2308V308VgtGgtC436992All0.000001
ORF1ab/nsp2308V308VgtGgtA2305223052AY.9.20.846691
ORF1ab/nsp2308V308VgtGgtA1182011820AY.9.10.989618
ORF1ab/nsp2308V308VgtGgtA506506AY.9.2.11
ORF1ab/nsp2308V308MGtgAtg305305All0.000058
ORF1ab/nsp2308V308VgtGgtA276287AY.430.001223
ORF1ab/nsp2308V308VgtGgtT11287AY.430.000049
ORF1ab/nsp2308V308VgtGgtA261274B.1.1.70.000234
ORF1ab/nsp2308V308VgtGgtT13274B.1.1.70.000012
ORF1ab/nsp2308V308AgTggCg244244All0.000047
ORF1ab/nsp2308V308LGtgTtg149152All0.000028
ORF1ab/nsp2308V308LGtgCtg2152All0
ORF1ab/nsp2308V308LGtGTtA1152All0
ORF1ab/nsp2308V308AgTggCg148148B.1.1.70.000132
ORF1ab/nsp2308V308VgtGgtA107110B.1.617.20.000403
ORF1ab/nsp2308V308VgtGgtT3110B.1.617.20.000011
ORF1ab/nsp2308V308VgtGgtA77100B.10.000705
ORF1ab/nsp2308V308VgtGgtT23100B.10.000211
ORF1ab/nsp2308V308VgtGgtA7083AY.250.000421
ORF1ab/nsp2308V308VgtGgtT1383AY.250.000078
ORF1ab/nsp2308V308MGtgAtg6161B.1.1.70.000055
ORF1ab/nsp2308V308VgtGgtA5053AY.40.000078
ORF1ab/nsp2308V308VgtGgtT353AY.40.000005
ORF1ab/nsp2308V308VgtGgtA5353B.1.1770.000698
ORF1ab/nsp2308V308MGtgAtg4545AY.1030.000279
ORF1ab/nsp2308V308VgtGgtA3844AY.440.000231
ORF1ab/nsp2308V308VgtGgtT644AY.440.000037
ORF1ab/nsp2308V308AgTggCg4141AY.1030.000255
ORF1ab/nsp2308V308delGTG---3939All0.000007
ORF1ab/nsp2308V308MGtgAtg3737AY.440.000225
ORF1ab/nsp2308V308VgtGgtA2727P.1.120.013069
ORF1ab/nsp2308V308VgtGgtA1924B.1.20.000167
ORF1ab/nsp2308V308VgtGgtT524B.1.20.000044
ORF1ab/nsp2308V308VgtGgtA2323B.1.1.250.013076
ORF1ab/nsp2308V308VgtGgtA2323B.1.1.3160.021277
ORF1ab/nsp2308V308LGtgTtg2323B.1.1.70.000021
ORF1ab/nsp2308V308VgtGgtA2222AY.390.000544
ORF1ab/nsp2308V308MGtgAtg2222B.1.617.20.000083
ORF1ab/nsp2308V308VgtGgtA2020AY.750.00112
ORF1ab/nsp2308V308LGtgTtg1919AY.250.000114
ORF1ab/nsp2308V308VgtGgtA1318P.10.000205
ORF1ab/nsp2308V308VgtGgtT518P.10.000079
ORF1ab/nsp2308V308LGtgTtg1717AY.40.000026
ORF1ab/nsp2308V308VgtGgtA1416AY.1030.000087
ORF1ab/nsp2308V308VgtGgtT216AY.1030.000012
ORF1ab/nsp2308V308VgtGgtA1616AY.90.001082
ORF1ab/nsp2308V308MGtgAtg1515AY.40.000023
ORF1ab/nsp2308V308VgtGgtA1415B.1.10.000254
ORF1ab/nsp2308V308VgtGgtT115B.1.10.000018
ORF1ab/nsp2308V308GgTggGg812All0.000002
ORF1ab/nsp2308V308GgTGgGC212All0
ORF1ab/nsp2308V308GgTGgGA112All0
ORF1ab/nsp2308V308GgTGgGT112All0
ORF1ab/nsp2308V308EgTggAg911All0.000002
ORF1ab/nsp2308V308EgTGgAA211All0
ORF1ab/nsp2308V308MGtgAtg1111AY.1190.000388
ORF1ab/nsp2308V308MGtgAtg1111B.1.1770.000145
ORF1ab/nsp2308V308VgtGgtA1111B.1.258.170.001144
ORF1ab/nsp2308V308VgtGgtA1010AY.4.20.000217
ORF1ab/nsp2308V308VgtGgtA1010AY.690.001867
ORF1ab/nsp2308V308VgtGgtA610B.1.1.5190.000238
ORF1ab/nsp2308V308VgtGgtT410B.1.1.5190.000159
ORF1ab/nsp2308V308LGtgTtg99AY.1030.000056
ORF1ab/nsp2308V308VgtGgtA99AY.970.015306
ORF1ab/nsp2308V308LGtgTtg99B.10.000082
ORF1ab/nsp2308V308VgtGgtT99B.1.1.4620.077586
ORF1ab/nsp2308V308delGTG---99B.1.1.70.000008
ORF1ab/nsp2308V308MGtgAtg99B.1.177.70.001484
ORF1ab/nsp2308V308VgtGgtA99B.1.2430.000626
ORF1ab/nsp2308V308VgtGgtA69B.1.4290.000141
ORF1ab/nsp2308V308VgtGgtT39B.1.4290.000071
ORF1ab/nsp2308V308VgtGgtA99Q.40.004093
ORF1ab/nsp2308V308VgtGgtA78AY.1020.000186
ORF1ab/nsp2308V308VgtGgtT18AY.1020.000027
ORF1ab/nsp2308V308VgtGgtA88AY.1200.000297
ORF1ab/nsp2308V308MGtgAtg88AY.250.000048
ORF1ab/nsp2308V308VgtGgtA88AY.330.000534
ORF1ab/nsp2308V308VgtGgtA88AY.4.2.10.001192
ORF1ab/nsp2308V308MGtgAtg88AY.430.000035
ORF1ab/nsp2308V308MGtgAtg88B.1.20.00007
ORF1ab/nsp2308V308VgtGgtA88B.1.6090.003835
ORF1ab/nsp2308V308LGtgTtg88B.1.617.20.00003
ORF1ab/nsp2308V308GgTggGg370.166667
ORF1ab/nsp2308V308GgTGgGC270.111111
ORF1ab/nsp2308V308GgTGgGA170.055556
ORF1ab/nsp2308V308GgTGgGT170.055556
ORF1ab/nsp2308V308VgtGgtA77AY.30.00007
ORF1ab/nsp2308V308VgtGgtA77AY.470.000218
ORF1ab/nsp2308V308VgtGgtA67AY.540.000572
ORF1ab/nsp2308V308VgtGgtT17AY.540.000095
ORF1ab/nsp2308V308VgtGgtA67B.1.2210.000426
ORF1ab/nsp2308V308VgtGgtT17B.1.2210.000071
ORF1ab/nsp2308V308VgtGgtA67C.370.000696
ORF1ab/nsp2308V308VgtGgtT17C.370.000116
ORF1ab/nsp2308V308LGtgTtg560.277778
ORF1ab/nsp2308V308VgtGgtC460.222222
ORF1ab/nsp2308V308LGtGTtA160.055556
ORF1ab/nsp2308V308VgtGgtT160.055556
ORF1ab/nsp2308V308VgtGgtA160.055556
ORF1ab/nsp2308V308del1gtGgt-36All0.000001
ORF1ab/nsp2308V308del1Gtg-tg26All0
ORF1ab/nsp2308V308del1gTGgC-16All0
ORF1ab/nsp2308V308LGtgTtg66AY.1020.000159
ORF1ab/nsp2308V308VgtGgtA66AY.16.10.00282
ORF1ab/nsp2308V308VgtGgtA66AY.260.00017
ORF1ab/nsp2308V308VgtGgtA56AY.50.000103
ORF1ab/nsp2308V308VgtGgtT16AY.50.000021
ORF1ab/nsp2308V308MGtgAtg66B.1.177.150.003785
ORF1ab/nsp2308V308VgtGgtA66B.1.360.000875
ORF1ab/nsp2308V308AgTggCg66B.1.617.20.000023
ORF1ab/nsp2308V308FGtGTtC450.222222
ORF1ab/nsp2308V308XGTgTAg350.166667
ORF1ab/nsp2308V308XGTGTAA150.055556
ORF1ab/nsp2308V308XGTGTGA150.055556
ORF1ab/nsp2308V308FGtGTtT150.055556
ORF1ab/nsp2308V308FGtGTtC45All0.000001
ORF1ab/nsp2308V308DgTGgAT35All0.000001
ORF1ab/nsp2308V308XGTgTAg35All0.000001
ORF1ab/nsp2308V308DgTGgAC25All0
ORF1ab/nsp2308V308XGTGTAA15All0
ORF1ab/nsp2308V308FGtGTtT15All0
ORF1ab/nsp2308V308XGTGTGA15All0
ORF1ab/nsp2308V308VgtGgtA45AY.290.000063
ORF1ab/nsp2308V308VgtGgtT15AY.290.000016
ORF1ab/nsp2308V308VgtGgtA55AY.300.001979
ORF1ab/nsp2308V308MGtgAtg55AY.390.000124
ORF1ab/nsp2308V308VgtGgtT45AY.39.10.000158
ORF1ab/nsp2308V308VgtGgtA15AY.39.10.00004
ORF1ab/nsp2308V308VgtGgtA55AY.450.000608
ORF1ab/nsp2308V308VgtGgtA55AY.460.00052
ORF1ab/nsp2308V308VgtGgtA55AY.680.001369
ORF1ab/nsp2308V308VgtGgtA55AY.75.10.000902
ORF1ab/nsp2308V308LGtgTtg55B.1.177.550.011655
ORF1ab/nsp2308V308VgtGgtA55B.1.3690.001426
ORF1ab/nsp2308V308VgtGgtA45B.1.5260.000094
ORF1ab/nsp2308V308VgtGgtT15B.1.5260.000024
ORF1ab/nsp2308V308EgTggAg340.166667
ORF1ab/nsp2308V308EgTGgAA140.055556
ORF1ab/nsp2308V308CGTGTGC24All0
ORF1ab/nsp2308V308CGTGTGT24All0
ORF1ab/nsp2308V308VgtGgtA24AY.1170.000169
ORF1ab/nsp2308V308VgtGgtT24AY.1170.000169
ORF1ab/nsp2308V308VgtGgtT24AY.1190.000071
ORF1ab/nsp2308V308VgtGgtA24AY.1190.000071
ORF1ab/nsp2308V308VgtGgtT24AY.200.000078
ORF1ab/nsp2308V308VgtGgtA24AY.200.000078
ORF1ab/nsp2308V308VgtGgtT34AY.3.10.000256
ORF1ab/nsp2308V308VgtGgtA14AY.3.10.000085
ORF1ab/nsp2308V308AgTggCg44AY.40.000006
ORF1ab/nsp2308V308MGtgAtg44AY.410.001176
ORF1ab/nsp2308V308LGtgTtg44AY.430.000018
ORF1ab/nsp2308V308MGtgAtg44AY.5.40.001107
ORF1ab/nsp2308V308LGtgTtg44AY.98.10.000194
ORF1ab/nsp2308V308delGTG---44B.1.1.330.001684
ORF1ab/nsp2308V308VgtGgtA24B.1.1600.000062
ORF1ab/nsp2308V308VgtGgtT24B.1.1600.000062
ORF1ab/nsp2308V308LGtgTtg44B.1.2580.000266
ORF1ab/nsp2308V308MGtgAtg44B.1.3960.002823
ORF1ab/nsp2308V308delGTG---44B.1.617.20.000015
ORF1ab/nsp2308V308VgtGgtA44B.1.6190.003484
ORF1ab/nsp2308V308WGTgTGg330.166667
ORF1ab/nsp2308V308CGTGTGC230.111111
ORF1ab/nsp2308V308YGTGTAC230.111111
ORF1ab/nsp2308V308DgTGgAC230.111111
ORF1ab/nsp2308V308CGTGTGT130.055556
ORF1ab/nsp2308V308DgTGgAT130.055556
ORF1ab/nsp2308V308YGTGTAT130.055556
ORF1ab/nsp2308V308WGTgTGg33All0.000001
ORF1ab/nsp2308V308YGTGTAC23All0
ORF1ab/nsp2308V308YGTGTAT13All0
ORF1ab/nsp2308V308VgtGgtA33AY.100.00159
ORF1ab/nsp2308V308VgtGgtA33AY.230.000209
ORF1ab/nsp2308V308VgtGgtA33AY.340.000291
ORF1ab/nsp2308V308AgTggCg33AY.39.10.000119
ORF1ab/nsp2308V308VgtGgtA23AY.420.00008
ORF1ab/nsp2308V308VgtGgtT13AY.420.00004
ORF1ab/nsp2308V308del1gtGgt-33AY.440.000018
ORF1ab/nsp2308V308AgTggCg33AY.470.000093
ORF1ab/nsp2308V308VgtGgtA33AY.700.000626
ORF1ab/nsp2308V308AgTggCg33AY.750.000168
ORF1ab/nsp2308V308VgtGgtA33AY.98.10.000145
ORF1ab/nsp2308V308AgTggCg33B.10.000027
ORF1ab/nsp2308V308VgtGgtA33B.1.1.1570.00274
ORF1ab/nsp2308V308VgtGgtA33B.1.1.1590.014019
ORF1ab/nsp2308V308VgtGgtA33B.1.1.2260.017442
ORF1ab/nsp2308V308VgtGgtT33B.1.1.3120.005736
ORF1ab/nsp2308V308VgtGgtA33B.1.1.3330.003229
ORF1ab/nsp2308V308delGTG---33B.1.1.3480.002389
ORF1ab/nsp2308V308VgtGgtT33B.1.1.40.008929
ORF1ab/nsp2308V308EgTggAg33B.1.160.140.006356
ORF1ab/nsp2308V308delGTG---33B.1.1770.00004
ORF1ab/nsp2308V308AgTggCg33B.1.20.000026
ORF1ab/nsp2308V308LGtgTtg23B.1.20.000018
ORF1ab/nsp2308V308LGtgCtg13B.1.20.000009
ORF1ab/nsp2308V308VgtGgtA33B.1.3510.000089
ORF1ab/nsp2308V308MGtgAtg33B.1.5960.000261
ORF1ab/nsp2308V308AgTggCg33P.10.000047
ORF1ab/nsp2308V308VgtGgtT33P.1.40.00293
ORF1ab/nsp2308V308VgtGgtA22A.10.000564
ORF1ab/nsp2308V308RGTgAGg12All0
ORF1ab/nsp2308V308RGTgCGg12All0
ORF1ab/nsp2308V308VgtGgtA22AY.1000.000092
ORF1ab/nsp2308V308VgtGgtA22AY.1180.000125
ORF1ab/nsp2308V308MGtgAtg22AY.260.000057
ORF1ab/nsp2308V308MGtgAtg22AY.30.00002
ORF1ab/nsp2308V308AgTggCg22AY.30.00002
ORF1ab/nsp2308V308LGtgTtg22AY.3.10.000171
ORF1ab/nsp2308V308VgtGgtA22AY.320.001065
ORF1ab/nsp2308V308VgtGgtT22AY.34.10.00102
ORF1ab/nsp2308V308MGtgAtg22AY.39.10.000079
ORF1ab/nsp2308V308VgtGgtT12AY.4.40.000409
ORF1ab/nsp2308V308VgtGgtA12AY.4.40.000409
ORF1ab/nsp2308V308LGtgTtg22AY.440.000012
ORF1ab/nsp2308V308MGtgAtg22AY.450.000243
ORF1ab/nsp2308V308MGtgAtg22AY.470.000062
ORF1ab/nsp2308V308MGtgAtg22AY.50.000041
ORF1ab/nsp2308V308VgtGgtA22AY.610.00021
ORF1ab/nsp2308V308VgtGgtA22AY.650.001066
ORF1ab/nsp2308V308MGtgAtg22AY.690.000373
ORF1ab/nsp2308V308VgtGgtA22AY.710.00095
ORF1ab/nsp2308V308MGtgAtg22AY.75.10.000361
ORF1ab/nsp2308V308LGtgTtg22AY.890.009804
ORF1ab/nsp2308V308VgtGgtA22AY.930.000546
ORF1ab/nsp2308V308del1Gtg-tg22B.10.000018
ORF1ab/nsp2308V308LGtgTtg22B.1.10.000036
ORF1ab/nsp2308V308MGtgAtg22B.1.10.000036
ORF1ab/nsp2308V308AgTggCg22B.1.1.1710.007353
ORF1ab/nsp2308V308VgtGgtT22B.1.1.2140.000111
ORF1ab/nsp2308V308MGtgAtg22B.1.1.250.001137
ORF1ab/nsp2308V308VgtGgtT22B.1.1.3720.001377
ORF1ab/nsp2308V308VgtGgtA22B.1.177.60.001953
ORF1ab/nsp2308V308VgtGgtA22B.1.177.630.005405
ORF1ab/nsp2308V308MGtgAtg22B.1.2430.000139
ORF1ab/nsp2308V308VgtGgtA22B.1.2580.000133
ORF1ab/nsp2308V308VgtGgtA22B.1.30.005236
ORF1ab/nsp2308V308VgtGgtA22B.1.350.016949
ORF1ab/nsp2308V308VgtGgtA22B.1.3750.001639
ORF1ab/nsp2308V308VgtGgtA22B.1.3990.003868
ORF1ab/nsp2308V308VgtGgtA22B.1.4270.000101
ORF1ab/nsp2308V308AgTggCg22B.1.4290.000047
ORF1ab/nsp2308V308VgtGgtT22B.1.5250.000226
ORF1ab/nsp2308V308VgtGgtT12B.1.617.10.000129
ORF1ab/nsp2308V308VgtGgtA12B.1.617.10.000129
ORF1ab/nsp2308V308VgtGgtA22B.1.9.50.011364
ORF1ab/nsp2308V308VgtGgtT22D.20.00015
ORF1ab/nsp2308V308delGTG---22N.60.014184
ORF1ab/nsp2308V308VgtGgtA12P.1.70.000319
ORF1ab/nsp2308V308VgtGgtT12P.1.70.000319
ORF1ab/nsp2308V308delGTG---22P.20.000373
ORF1ab/nsp2308V308VgtGgtA11AA.10.007246
ORF1ab/nsp2308V308LGtgTtg11AL.10.012987
ORF1ab/nsp2308V308del2GTG--A11All0
ORF1ab/nsp2308V308VgtGgtA11AY.10.000396
ORF1ab/nsp2308V308VgtGgtA11AY.1100.000113
ORF1ab/nsp2308V308delGTG---11AY.1130.000142
ORF1ab/nsp2308V308VgtGgtA11AY.1160.000287
ORF1ab/nsp2308V308VgtGgtA11AY.116.10.000311
ORF1ab/nsp2308V308MGtgAtg11AY.1180.000063
ORF1ab/nsp2308V308LGtgTtg11AY.1180.000063
ORF1ab/nsp2308V308delGTG---11AY.1190.000035
ORF1ab/nsp2308V308LGtgTtg11AY.1190.000035
ORF1ab/nsp2308V308VgtGgtA11AY.120.000316
ORF1ab/nsp2308V308LGtgTtg11AY.1200.000037
ORF1ab/nsp2308V308MGtgAtg11AY.1200.000037
ORF1ab/nsp2308V308MGtgAtg11AY.120.10.000321
ORF1ab/nsp2308V308AgTggCg11AY.120.2.10.000498
ORF1ab/nsp2308V308VgtGgtA11AY.120.2.10.000498
ORF1ab/nsp2308V308VgtGgtA11AY.1210.000135
ORF1ab/nsp2308V308VgtGgtA11AY.130.000161
ORF1ab/nsp2308V308VgtGgtA11AY.140.000088
ORF1ab/nsp2308V308VgtGgtA11AY.150.002222
ORF1ab/nsp2308V308MGtgAtg11AY.170.008197
ORF1ab/nsp2308V308LGtgTtg11AY.190.00114
ORF1ab/nsp2308V308AgTggCg11AY.270.000065
ORF1ab/nsp2308V308AgTggCg11AY.290.000016
ORF1ab/nsp2308V308LGtgTtg11AY.290.000016
ORF1ab/nsp2308V308delGTG---11AY.290.000016
ORF1ab/nsp2308V308AgTggCg11AY.29.10.000221
ORF1ab/nsp2308V308LGtgTtg11AY.30.00001
ORF1ab/nsp2308V308delGTG---11AY.30.00001
ORF1ab/nsp2308V308AgTggCg11AY.3.10.000085
ORF1ab/nsp2308V308VgtGgtT11AY.380.000499
ORF1ab/nsp2308V308AgTggCg11AY.390.000025
ORF1ab/nsp2308V308AgTggCg11AY.4.20.000022
ORF1ab/nsp2308V308MGtgAtg11AY.4.20.000022
ORF1ab/nsp2308V308MGtgAtg11AY.4.2.10.000149
ORF1ab/nsp2308V308LGtgTtg11AY.4.40.000409
ORF1ab/nsp2308V308AgTggCg11AY.4.50.000107
ORF1ab/nsp2308V308VgtGgtA11AY.4.50.000107
ORF1ab/nsp2308V308LGtgTtg11AY.420.00004
ORF1ab/nsp2308V308AgTggCg11AY.420.00004
ORF1ab/nsp2308V308delGTG---11AY.430.000004
ORF1ab/nsp2308V308DgTGgAT11AY.440.000006
ORF1ab/nsp2308V308AgTggCg11AY.440.000006
ORF1ab/nsp2308V308EgTGgAA11AY.440.000006
ORF1ab/nsp2308V308AgTggCg11AY.460.000104
ORF1ab/nsp2308V308VgtGgtA11AY.46.10.001027
ORF1ab/nsp2308V308LGtgTtg11AY.50.000021
ORF1ab/nsp2308V308VgtGgtA11AY.520.000814
ORF1ab/nsp2308V308MGtgAtg11AY.540.000095
ORF1ab/nsp2308V308VgtGgtA11AY.550.000917
ORF1ab/nsp2308V308VgtGgtA11AY.590.00053
ORF1ab/nsp2308V308LGtgTtg11AY.60.000041
ORF1ab/nsp2308V308VgtGgtA11AY.7.10.000113
ORF1ab/nsp2308V308MGtgAtg11AY.700.000209
ORF1ab/nsp2308V308VgtGgtT11AY.770.001127
ORF1ab/nsp2308V308RGTgAGg11AY.790.001211
ORF1ab/nsp2308V308VgtGgtA11AY.840.000437
ORF1ab/nsp2308V308LGtgTtg11AY.90.000068
ORF1ab/nsp2308V308delGTG---11AY.9.20.000037
ORF1ab/nsp2308V308AgTggCg11AY.900.000684
ORF1ab/nsp2308V308MGtgAtg11AY.930.000273
ORF1ab/nsp2308V308VgtGgtA11AY.960.002075
ORF1ab/nsp2308V308MGtgAtg11AY.980.000079
ORF1ab/nsp2308V308MGtgAtg11AY.98.10.000048
ORF1ab/nsp2308V308delGTG---11AY.990.001049
ORF1ab/nsp2308V308VgtGgtT11AY.99.20.000092
ORF1ab/nsp2308V308VgtGgtT11B0.000128
ORF1ab/nsp2308V308CGTGTGT11B.10.000009
ORF1ab/nsp2308V308MGtgAtg11B.10.000009
ORF1ab/nsp2308V308VgtGgtA11B.1.1.1640.005155
ORF1ab/nsp2308V308LGtgTtg11B.1.1.1940.00495
ORF1ab/nsp2308V308VgtGgtA11B.1.1.2070.001182
ORF1ab/nsp2308V308VgtGgtA11B.1.1.2160.00089
ORF1ab/nsp2308V308VgtGgtA11B.1.1.2200.001859
ORF1ab/nsp2308V308VgtGgtA11B.1.1.2220.000204
ORF1ab/nsp2308V308AgTggCg11B.1.1.250.000569
ORF1ab/nsp2308V308VgtGgtA11B.1.1.2570.009709
ORF1ab/nsp2308V308LGtgTtg11B.1.1.280.000311
ORF1ab/nsp2308V308AgTggCg11B.1.1.280.000311
ORF1ab/nsp2308V308MGtgAtg11B.1.1.2830.023256
ORF1ab/nsp2308V308delGTG---11B.1.1.2840.000107
ORF1ab/nsp2308V308VgtGgtT11B.1.1.3060.000438
ORF1ab/nsp2308V308LGtgTtg11B.1.1.3480.000796
ORF1ab/nsp2308V308LGtgTtg11B.1.1.3600.03125
ORF1ab/nsp2308V308GgTggGg11B.1.1.4330.001425
ORF1ab/nsp2308V308VgtGgtA11B.1.1.4640.001473
ORF1ab/nsp2308V308del1gTGgC-11B.1.1.5150.02
ORF1ab/nsp2308V308LGtgTtg11B.1.1.5190.00004
ORF1ab/nsp2308V308VgtGgtA11B.1.1.630.000386
ORF1ab/nsp2308V308DgTGgAT11B.1.1.70.000001
ORF1ab/nsp2308V308LGtgTtg11B.1.1.700.000341
ORF1ab/nsp2308V308LGtgTtg11B.1.1180.006711
ORF1ab/nsp2308V308AgTggCg11B.1.1280.000635
ORF1ab/nsp2308V308LGtgTtg11B.1.1600.000031
ORF1ab/nsp2308V308MGtgAtg11B.1.1600.000031
ORF1ab/nsp2308V308AgTggCg11B.1.160.260.002421
ORF1ab/nsp2308V308LGtgCtg11B.1.160.320.004292
ORF1ab/nsp2308V308AgTggCg11B.1.1770.000013
ORF1ab/nsp2308V308LGtgTtg11B.1.1770.000013
ORF1ab/nsp2308V308delGTG---11B.1.177.160.000664
ORF1ab/nsp2308V308MGtgAtg11B.1.177.230.003236
ORF1ab/nsp2308V308GgTggGg11B.1.177.350.000691
ORF1ab/nsp2308V308delGTG---11B.1.177.570.000281
ORF1ab/nsp2308V308VgtGgtT11B.1.177.620.001192
ORF1ab/nsp2308V308MGtgAtg11B.1.177.630.002703
ORF1ab/nsp2308V308delGTG---11B.1.177.730.000566
ORF1ab/nsp2308V308VgtGgtA11B.1.177.820.000477
ORF1ab/nsp2308V308LGtgTtg11B.1.1820.007246
ORF1ab/nsp2308V308RGTgCGg11B.1.20.000009
ORF1ab/nsp2308V308GgTggGg11B.1.20.000009
ORF1ab/nsp2308V308del2GTG--A11B.1.20.000009
ORF1ab/nsp2308V308VgtGgtA11B.1.2130.014925
ORF1ab/nsp2308V308EgTggAg11B.1.2400.000216
ORF1ab/nsp2308V308MGtgAtg11B.1.2580.000067
ORF1ab/nsp2308V308MGtgAtg11B.1.3110.000275
ORF1ab/nsp2308V308GgTggGg11B.1.3490.000715
ORF1ab/nsp2308V308VgtGgtA11B.1.351.20.000303
ORF1ab/nsp2308V308AgTggCg11B.1.351.20.000303
ORF1ab/nsp2308V308VgtGgtA11B.1.3560.001727
ORF1ab/nsp2308V308VgtGgtT11B.1.36.210.00216
ORF1ab/nsp2308V308VgtGgtA11B.1.36.290.000517
ORF1ab/nsp2308V308VgtGgtT11B.1.36.310.001751
ORF1ab/nsp2308V308VgtGgtT11B.1.3620.001541
ORF1ab/nsp2308V308VgtGgtA11B.1.4040.001302
ORF1ab/nsp2308V308LGtgTtg11B.1.4110.003704
ORF1ab/nsp2308V308VgtGgtA11B.1.4480.002625
ORF1ab/nsp2308V308VgtGgtA11B.1.5090.000866
ORF1ab/nsp2308V308delGTG---11B.1.5250.000113
ORF1ab/nsp2308V308MGtgAtg11B.1.5260.000024
ORF1ab/nsp2308V308LGtgTtg11B.1.5640.000426
ORF1ab/nsp2308V308VgtGgtA11B.1.5730.006098
ORF1ab/nsp2308V308LGtgTtg11B.1.5770.000687
ORF1ab/nsp2308V308VgtGgtA11B.1.5820.000491
ORF1ab/nsp2308V308VgtGgtA11B.1.5950.000261
ORF1ab/nsp2308V308VgtGgtA11B.1.5960.000087
ORF1ab/nsp2308V308AgTggCg11B.1.5960.000087
ORF1ab/nsp2308V308AgTggCg11B.1.6090.000479
ORF1ab/nsp2308V308MGtgAtg11B.1.617.10.000129
ORF1ab/nsp2308V308EgTggAg11B.1.617.20.000004
ORF1ab/nsp2308V308VgtGgtA11B.1.6370.000073
ORF1ab/nsp2308V308GgTggGg11B.1.90.006173
ORF1ab/nsp2308V308VgtGgtT11B.550.00295
ORF1ab/nsp2308V308VgtGgtT11C.140.004329
ORF1ab/nsp2308V308VgtGgtA11N.70.029412
ORF1ab/nsp2308V308LGtgTtg11P.10.000016
ORF1ab/nsp2308V308MGtgAtg11P.10.000016
ORF1ab/nsp2308V308AgTggCg11P.1.130.000898
ORF1ab/nsp2308V308VgtGgtT11P.1.140.000048
ORF1ab/nsp2308V308VgtGgtA11P.20.000187
ORF1ab/nsp2308V308MGtgAtg11P.60.003145
ORF1ab/nsp2308V308EgTggAg11Q.10.000126