CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 304 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2304T304PT484PnonsynAcaCca272711715-1717

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2304T304PAcaCca2727All0.000005
ORF1ab/nsp2304T304PAcaCca55AY.320.002662
ORF1ab/nsp2304T304PAcaCca55B.10.000046
ORF1ab/nsp2304T304PAcaCca55B.1.4700.007022
ORF1ab/nsp2304T304PAcaCca33AY.250.000018
ORF1ab/nsp2304T304PAcaCca22B.1.617.20.000008
ORF1ab/nsp2304T304PAcaCca11AY.1130.000142
ORF1ab/nsp2304T304PAcaCca11AY.440.000006
ORF1ab/nsp2304T304PAcaCca11AY.46.20.000635
ORF1ab/nsp2304T304PAcaCca11B.1.10.000018
ORF1ab/nsp2304T304PAcaCca11B.1.1.70.000001
ORF1ab/nsp2304T304PAcaCca11B.1.20.000009
ORF1ab/nsp2304T304PAcaCca11B.1.3510.00003