CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 27 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp227R27LR207LnonsyncGtcTt2452451884-886

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp227R27LcGtcTt245245All0.000047
ORF1ab/nsp227R27LcGtcTt6666B.1.1.70.000059
ORF1ab/nsp227R27LcGtcTt5757AY.40.000089
ORF1ab/nsp227R27LcGtcTt2121B.1.2210.001492
ORF1ab/nsp227R27LcGtcTt1111AY.30.000109
ORF1ab/nsp227R27LcGtcTt1010B.1.10.000181
ORF1ab/nsp227R27LcGtcTt99B.1.4290.000212
ORF1ab/nsp227R27LcGtcTt88B.1.617.20.00003
ORF1ab/nsp227R27LcGtcTt55AY.1020.000133
ORF1ab/nsp227R27LcGtcTt44AY.1030.000025
ORF1ab/nsp227R27LcGtcTt33B.10.000027
ORF1ab/nsp227R27LcGtcTt33B.1.1600.000094
ORF1ab/nsp227R27LcGtcTt33P.1.150.000697
ORF1ab/nsp227R27LcGtcTt33R.10.00027
ORF1ab/nsp227R27LcGtcTt22AY.4.20.000043
ORF1ab/nsp227R27LcGtcTt22AY.440.000012
ORF1ab/nsp227R27LcGtcTt22B.1.1.280.000622
ORF1ab/nsp227R27LcGtcTt22B.1.1.4160.00181
ORF1ab/nsp227R27LcGtcTt22B.1.2100.004264
ORF1ab/nsp227R27LcGtcTt22B.1.5860.021978
ORF1ab/nsp227R27LcGtcTt22D.20.00015
ORF1ab/nsp227R27LcGtcTt11A.210.00277
ORF1ab/nsp227R27LcGtcTt11A.23.10.000704
ORF1ab/nsp227R27LcGtcTt11AY.290.000016
ORF1ab/nsp227R27LcGtcTt11AY.330.000067
ORF1ab/nsp227R27LcGtcTt11AY.360.000148
ORF1ab/nsp227R27LcGtcTt11AY.390.000025
ORF1ab/nsp227R27LcGtcTt11AY.430.000004
ORF1ab/nsp227R27LcGtcTt11AY.470.000031
ORF1ab/nsp227R27LcGtcTt11AY.50.000021
ORF1ab/nsp227R27LcGtcTt11AY.510.000909
ORF1ab/nsp227R27LcGtcTt11AY.610.000105
ORF1ab/nsp227R27LcGtcTt11AY.75.10.00018
ORF1ab/nsp227R27LcGtcTt11AY.9.20.000037
ORF1ab/nsp227R27LcGtcTt11AY.920.000287
ORF1ab/nsp227R27LcGtcTt11B0.000128
ORF1ab/nsp227R27LcGtcTt11B.1.1.1860.003436
ORF1ab/nsp227R27LcGtcTt11B.1.1.250.000569
ORF1ab/nsp227R27LcGtcTt11B.1.1.80.003584
ORF1ab/nsp227R27LcGtcTt11B.1.1770.000013
ORF1ab/nsp227R27LcGtcTt11B.1.20.000009
ORF1ab/nsp227R27LcGtcTt11B.1.2430.00007
ORF1ab/nsp227R27LcGtcTt11B.1.3290.000608
ORF1ab/nsp227R27LcGtcTt11B.1.36.270.000763
ORF1ab/nsp227R27LcGtcTt11B.1.36.290.000517
ORF1ab/nsp227R27LcGtcTt11B.1.6280.000352
ORF1ab/nsp227R27LcGtcTt11B.230.002924
ORF1ab/nsp227R27LcGtcTt11P.10.000016
ORF1ab/nsp227R27LcGtcTt11P.1.70.000319