CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 268 | D268del | D448del | del | GAC | --- | 2740 | 2740 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268D | D448D | syn | gaC | gaT | 2272 | 2272 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268G | D448G | nonsyn | gAc | gGc | 230 | 228 | 0.991304 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268G | D448G | nonsyn | gAC | gGT | 230 | 1 | 0.00434783 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268G | D448G | nonsyn | gAC | gGA | 230 | 1 | 0.00434783 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268N | D448N | nonsyn | Gac | Aac | 201 | 200 | 0.995025 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268N | D448N | nonsyn | GaC | AaT | 201 | 1 | 0.00497512 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268E | D448E | nonsyn | gaC | gaA | 96 | 94 | 0.979167 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268E | D448E | nonsyn | gaC | gaG | 96 | 2 | 0.0208333 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268Y | D448Y | nonsyn | Gac | Tac | 53 | 53 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268A | D448A | nonsyn | gAc | gCc | 27 | 27 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268V | D448V | nonsyn | gAc | gTc | 7 | 6 | 0.857143 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268V | D448V | nonsyn | gAC | gTG | 7 | 1 | 0.142857 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268H | D448H | nonsyn | Gac | Cac | 5 | 5 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268S | D448S | nonsyn | GAc | AGc | 3 | 2 | 0.666667 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268S | D448S | nonsyn | GAc | TCc | 3 | 1 | 0.333333 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268del1 | D448del1 | del | Gac | -ac | 2 | 2 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268F | D448F | nonsyn | GAc | TTc | 1 | 1 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268I | D448I | nonsyn | GAc | ATc | 1 | 1 | 1 | 1607-1609 |
ORF1ab/nsp2 | 268 | D268T | D448T | nonsyn | GAc | ACc | 1 | 1 | 1 | 1607-1609 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2740 | 2740 | All | 0.000524 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2272 | 2272 | All | 0.000435 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1180 | 1180 | B.1.1.7 | 0.001056 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 646 | 646 | B | 0.082566 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 312 | 312 | B.23 | 0.912281 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 257 | 257 | B.45 | 0.984674 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 228 | 230 | All | 0.000044 |
ORF1ab/nsp2 | 268 | D268G | gAC | gGA | 1 | 230 | All | 0 |
ORF1ab/nsp2 | 268 | D268G | gAC | gGT | 1 | 230 | All | 0 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 228 | 228 | B.55 | 0.672566 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 200 | 201 | All | 0.000038 |
ORF1ab/nsp2 | 268 | D268N | GaC | AaT | 1 | 201 | All | 0 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 176 | 176 | B.11 | 0.902564 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 128 | 128 | C.23 | 0.744186 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 117 | 117 | B.10 | 0.966942 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 104 | 104 | B.1 | 0.000953 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 94 | 96 | All | 0.000018 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaG | 2 | 96 | All | 0 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 88 | 88 | B.52 | 0.888889 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 82 | 82 | AY.4 | 0.000128 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 67 | 67 | B.1.617.2 | 0.000252 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 65 | 65 | B.1.617.2 | 0.000245 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 60 | 60 | AY.20 | 0.002332 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 60 | 60 | P.1.1 | 0.01906 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 58 | 58 | B.27 | 0.892308 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 57 | 57 | B.1 | 0.000522 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 56 | 56 | B.57 | 0.848485 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 55 | 55 | AY.44 | 0.000335 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 55 | 55 | B.15 | 0.964912 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 53 | 53 | All | 0.00001 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 53 | 53 | AY.25 | 0.000319 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 52 | 52 | AY.25 | 0.000313 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 48 | 48 | B.1.177 | 0.000632 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 46 | 46 | AY.103 | 0.000286 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 46 | 46 | B.1.177.86 | 0.008439 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 46 | 46 | B.1.617.2 | 0.000173 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 45 | 45 | AY.44 | 0.000274 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 43 | 43 | B.1 | 0.000394 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 43 | 43 | B.26 | 0.632353 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 41 | 41 | AY.26 | 0.001161 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 39 | 39 | B.1.2 | 0.000343 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 38 | 38 | B.1.1 | 0.000689 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 38 | 38 | B.1.160 | 0.001185 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 38 | 38 | B.47 | 0.77551 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 36 | 36 | B.1.1 | 0.000653 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 33 | 33 | B.1.1.7 | 0.00003 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 31 | 31 | P.1 | 0.000488 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 29 | 29 | AY.98 | 0.002291 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 27 | 27 | All | 0.000005 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 25 | 25 | AY.43 | 0.000111 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 25 | 25 | B.1.1.222 | 0.0051 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 25 | 25 | B.1.177 | 0.000329 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 22 | 22 | B.1.2 | 0.000194 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 20 | 20 | AY.6 | 0.000823 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 20 | 20 | B.49 | 1 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 20 | 20 | P.1 | 0.000315 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 20 | 20 | Q.1 | 0.002527 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 19 | 19 | B.1.1.7 | 0.000017 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 19 | 19 | C.37 | 0.002205 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 18 | 18 | AY.9.2 | 0.000661 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 17 | 17 | AY.39 | 0.00042 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 15 | 15 | D.2 | 0.001126 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 13 | 13 | AY.2 | 0.00463 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 12 | 12 | AY.102 | 0.000318 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 11 | 11 | AY.4 | 0.000017 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 11 | 11 | AY.47 | 0.000342 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 11 | 11 | B.1.2 | 0.000097 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 10 | 10 | A.27 | 0.016556 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 10 | 10 | AY.3 | 0.000099 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 10 | 10 | AY.4 | 0.000016 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 10 | 10 | B.1.221 | 0.00071 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 10 | 10 | P.1.4 | 0.009766 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 9 | 9 | B.1.369 | 0.002567 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 8 | 8 | AY.103 | 0.00005 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 8 | 8 | AY.117 | 0.000676 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 8 | 8 | AY.20 | 0.000311 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 8 | 8 | B.1.1.1 | 0.002614 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 8 | 8 | B.1.177.4 | 0.001688 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 6 | 7 | All | 0.000001 |
ORF1ab/nsp2 | 268 | D268V | gAC | gTG | 1 | 7 | All | 0 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 7 | 7 | AY.29 | 0.00011 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 7 | 7 | B.1.258 | 0.000466 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 7 | 7 | B.1.526 | 0.000165 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 6 | 6 | AY.103 | 0.000037 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 6 | 6 | AY.33 | 0.000401 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 6 | 6 | AY.36 | 0.000889 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 6 | 6 | B.1.1.434 | 0.002091 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 5 | 5 | All | 0.000001 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | AY.71 | 0.002375 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | B.1.1.214 | 0.000277 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | B.1.628 | 0.001762 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 4 | 4 | AY.26 | 0.000113 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 4 | 4 | B | 0.000511 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 4 | 4 | B.1.177.58 | 0.005326 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.239 | 0.004884 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.425 | 0.011976 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.582 | 0.001963 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp2 | 268 | D268S | GAc | AGc | 2 | 3 | All | 0 |
ORF1ab/nsp2 | 268 | D268S | GAc | TCc | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 3 | 3 | AY.120 | 0.000112 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 3 | 3 | AY.29 | 0.000047 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 3 | AY.44 | 0.000012 |
ORF1ab/nsp2 | 268 | D268N | GaC | AaT | 1 | 3 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | AY.99.1 | 0.004658 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | AZ.1 | 0.002602 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | B.1.1.241 | 0.006211 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 3 | 3 | B.1.243.1 | 0.066667 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 3 | 3 | B.1.284 | 0.039474 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 2 | 2 | 0.111111 | |
ORF1ab/nsp2 | 268 | D268del1 | Gac | -ac | 2 | 2 | All | 0 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | AY.83 | 0.003448 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp2 | 268 | D268V | gAC | gTG | 1 | 2 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 2 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.1.329 | 0.007692 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.1.388 | 0.090909 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.1.525 | 0.010929 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.160.29 | 0.008439 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.177.32 | 0.002699 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.450 | 0.022727 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.1.93 | 0.001867 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | B.3 | 0.001661 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | B.4 | 0.004415 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | C.8 | 0.008929 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp2 | 268 | D268T | GAc | ACc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268S | GAc | TCc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268F | GAc | TTc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268I | GAc | ATc | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | A.2.3 | 0.004739 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp2 | 268 | D268T | GAc | ACc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 268 | D268F | GAc | TTc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 268 | D268I | GAc | ATc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 268 | D268S | GAc | AGc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 268 | D268G | gAC | gGT | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp2 | 268 | D268S | GAc | AGc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp2 | 268 | D268G | gAC | gGA | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaG | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 268 | D268del1 | Gac | -ac | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.1.134 | 0.011364 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.299 | 0.012195 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.368 | 0.003086 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.1.461 | 0.012048 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.127 | 0.002198 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp2 | 268 | D268V | gAc | gTc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 268 | D268H | Gac | Cac | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.35 | 0.008475 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.437 | 0.020833 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.450 | 0.011364 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.500 | 0.052632 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 268 | D268G | gAc | gGc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.11 | 0.005128 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp2 | 268 | D268del1 | Gac | -ac | 1 | 1 | B.47 | 0.020408 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | B.5 | 0.038462 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | C.27 | 0.018519 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp2 | 268 | D268E | gaC | gaG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 268 | D268Y | Gac | Tac | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | D.5 | 0.004975 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp2 | 268 | D268A | gAc | gCc | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 268 | D268N | Gac | Aac | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp2 | 268 | D268D | gaC | gaT | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp2 | 268 | D268del | GAC | --- | 1 | 1 | Y.1 | 0.012821 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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