CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 26

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp226A26VA206VnonsyngCagTa316131600.999684881-883
ORF1ab/nsp226A26VA206VnonsyngCAgTG316110.000316356881-883
ORF1ab/nsp226A26TA206TnonsynGcaAca6186170.998382881-883
ORF1ab/nsp226A26TA206TnonsynGcAAcG61810.00161812881-883
ORF1ab/nsp226A26AA206AsyngcAgcG2611660.636015881-883
ORF1ab/nsp226A26AA206AsyngcAgcT261840.321839881-883
ORF1ab/nsp226A26AA206AsyngcAgcC261110.0421456881-883
ORF1ab/nsp226A26SA206SnonsynGcaTca1691691881-883
ORF1ab/nsp226A26EA206EnonsyngCagAa83820.987952881-883
ORF1ab/nsp226A26EA206EnonsyngCAgAG8310.0120482881-883
ORF1ab/nsp226A26delA206deldelGCA---47471881-883
ORF1ab/nsp226A26GA206GnonsyngCagGa331881-883
ORF1ab/nsp226A26del2A206del2delgCAg--221881-883
ORF1ab/nsp226A26del1A206del1delGca-ca210.5881-883
ORF1ab/nsp226A26KA206KnonsynGCaAAa210.5881-883
ORF1ab/nsp226A26KA206KnonsynGCAAAG210.5881-883
ORF1ab/nsp226A26del1A206del1delgcAgc-210.5881-883
ORF1ab/nsp226A26LA206LnonsynGCaTTa111881-883
ORF1ab/nsp226A26MA206MnonsynGCAATG111881-883
ORF1ab/nsp226A26IA206InonsynGCaATa111881-883
ORF1ab/nsp226A26PA206PnonsynGcaCca111881-883

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp226A26VgCagTa31603161All0.000604
ORF1ab/nsp226A26VgCAgTG13161All0
ORF1ab/nsp226A26VgCagTa680680B.1.1.70.000609
ORF1ab/nsp226A26VgCagTa662662B.10.006064
ORF1ab/nsp226A26TGcaAca617618All0.000118
ORF1ab/nsp226A26TGcAAcG1618All0
ORF1ab/nsp226A26VgCagTa490490AY.1030.003042
ORF1ab/nsp226A26VgCagTa446446B.1.1270.98022
ORF1ab/nsp226A26AgcAgcG166261All0.000032
ORF1ab/nsp226A26AgcAgcT84261All0.000016
ORF1ab/nsp226A26AgcAgcC11261All0.000002
ORF1ab/nsp226A26VgCagTa178178B.1.20.001567
ORF1ab/nsp226A26SGcaTca169169All0.000032
ORF1ab/nsp226A26TGcaAca117117B.1.1.70.000105
ORF1ab/nsp226A26VgCagTa9696AY.290.001514
ORF1ab/nsp226A26EgCagAa8283All0.000016
ORF1ab/nsp226A26EgCAgAG183All0
ORF1ab/nsp226A26VgCagTa6767B.1.2821
ORF1ab/nsp226A26VgCagTa6464B.1.617.20.000241
ORF1ab/nsp226A26AgcAgcG5659B.1.1.70.00005
ORF1ab/nsp226A26AgcAgcT259B.1.1.70.000002
ORF1ab/nsp226A26AgcAgcC159B.1.1.70.000001
ORF1ab/nsp226A26TGcaAca5757AY.40.000089
ORF1ab/nsp226A26AgcAgcT5656AY.4.20.001215
ORF1ab/nsp226A26VgCagTa5656AY.50.001156
ORF1ab/nsp226A26delGCA---4747All0.000009
ORF1ab/nsp226A26TGcaAca4747Q.10.005937
ORF1ab/nsp226A26TGcaAca4444P.1.150.010223
ORF1ab/nsp226A26TGcaAca4242AY.250.000253
ORF1ab/nsp226A26EgCagAa3939B.1.1.70.000035
ORF1ab/nsp226A26TGcaAca3939B.1.5880.035487
ORF1ab/nsp226A26SGcaTca3636AY.40.000056
ORF1ab/nsp226A26TGcaAca3333B.1.1.5190.00131
ORF1ab/nsp226A26AgcAgcG2728B.1.10.00049
ORF1ab/nsp226A26AgcAgcT128B.1.10.000018
ORF1ab/nsp226A26VgCagTa2727AY.250.000162
ORF1ab/nsp226A26VgCagTa2626AY.30.000259
ORF1ab/nsp226A26VgCagTa2525AY.40.000039
ORF1ab/nsp226A26TGcaAca2525B.1.177.830.037037
ORF1ab/nsp226A26VgCagTa2424AY.4.20.000521
ORF1ab/nsp226A26TGcaAca2323AY.440.00014
ORF1ab/nsp226A26SGcaTca2222AY.250.000132
ORF1ab/nsp226A26TGcaAca2121B.1.617.20.000079
ORF1ab/nsp226A26VgCagTa2020P.20.003733
ORF1ab/nsp226A26VgCagTa1919AY.390.00047
ORF1ab/nsp226A26TGcaAca1919B.10.000174
ORF1ab/nsp226A26TGcaAca1919B.1.2430.001322
ORF1ab/nsp226A26SGcaTca1919B.1.617.20.000072
ORF1ab/nsp226A26VgCagTa1818AY.1020.000477
ORF1ab/nsp226A26EgCagAa1414B.1.6210.001239
ORF1ab/nsp226A26AgcAgcG1013AY.40.000016
ORF1ab/nsp226A26AgcAgcT213AY.40.000003
ORF1ab/nsp226A26AgcAgcC113AY.40.000002
ORF1ab/nsp226A26VgCagTa1313AY.4.30.010943
ORF1ab/nsp226A26VgCagTa1313B.1.6090.006232
ORF1ab/nsp226A26VgCagTa1313P.10.000205
ORF1ab/nsp226A26AgcAgcG712AY.1030.000043
ORF1ab/nsp226A26AgcAgcT512AY.1030.000031
ORF1ab/nsp226A26VgCagTa1212AY.370.003793
ORF1ab/nsp226A26VgCagTa1212AY.430.000053
ORF1ab/nsp226A26TGcaAca1111AY.1030.000068
ORF1ab/nsp226A26VgCagTa1111AY.440.000067
ORF1ab/nsp226A26AgcAgcG711B.1.617.20.000026
ORF1ab/nsp226A26AgcAgcT411B.1.617.20.000015
ORF1ab/nsp226A26TGcaAca1010AY.430.000044
ORF1ab/nsp226A26TGcaAca1010B.1.360.001459
ORF1ab/nsp226A26AgcAgcT1010B.1.5250.001132
ORF1ab/nsp226A26SGcaTca99AY.29.10.001985
ORF1ab/nsp226A26SGcaTca99B.10.000082
ORF1ab/nsp226A26SGcaTca99B.1.1.70.000008
ORF1ab/nsp226A26AgcAgcG99P.10.000142
ORF1ab/nsp226A26SGcaTca88AY.50.000165
ORF1ab/nsp226A26AgcAgcG78AY.9.20.000257
ORF1ab/nsp226A26AgcAgcC18AY.9.20.000037
ORF1ab/nsp226A26VgCagTa88C.36.10.033195
ORF1ab/nsp226A26VgCagTa77AY.116.10.00218
ORF1ab/nsp226A26SGcaTca77AY.200.000272
ORF1ab/nsp226A26AgcAgcG77B.1.1.2140.000388
ORF1ab/nsp226A26VgCagTa77B.1.360.001021
ORF1ab/nsp226A26VgCagTa77B.1.4290.000165
ORF1ab/nsp226A26VgCagTa66AY.1210.000812
ORF1ab/nsp226A26VgCagTa66AY.260.00017
ORF1ab/nsp226A26VgCagTa66B.1.177.810.001136
ORF1ab/nsp226A26TGcaAca66B.1.20.000053
ORF1ab/nsp226A26VgCagTa66R.10.00054
ORF1ab/nsp226A26SGcaTca55AY.1020.000133
ORF1ab/nsp226A26TGcaAca55AY.350.001165
ORF1ab/nsp226A26delGCA---55AY.40.000008
ORF1ab/nsp226A26delGCA---55B.1.1.330.002104
ORF1ab/nsp226A26TGcaAca55B.1.177.810.000947
ORF1ab/nsp226A26VgCagTa55B.1.466.20.001956
ORF1ab/nsp226A26TGcaAca55P.20.000933
ORF1ab/nsp226A26VgCagTa44AY.1040.007937
ORF1ab/nsp226A26VgCagTa44AY.1180.000251
ORF1ab/nsp226A26TGcaAca44AY.150.008889
ORF1ab/nsp226A26VgCagTa44AY.200.000155
ORF1ab/nsp226A26TGcaAca44B.1.10.000073
ORF1ab/nsp226A26delGCA---44B.1.1.3480.003185
ORF1ab/nsp226A26TGcaAca44B.1.1600.000125
ORF1ab/nsp226A26VgCagTa44B.1.1770.000053
ORF1ab/nsp226A26SGcaTca44B.1.2210.000284
ORF1ab/nsp226A26GgCagGa33All0.000001
ORF1ab/nsp226A26TGcaAca33AY.1180.000188
ORF1ab/nsp226A26TGcaAca33AY.30.00003
ORF1ab/nsp226A26VgCagTa33AY.360.000445
ORF1ab/nsp226A26SGcaTca33AY.4.20.000065
ORF1ab/nsp226A26AgcAgcG33AY.440.000018
ORF1ab/nsp226A26EgCagAa33B.10.000027
ORF1ab/nsp226A26VgCagTa33B.1.10.000054
ORF1ab/nsp226A26EgCagAa33B.1.1.5190.000119
ORF1ab/nsp226A26SGcaTca33B.1.1.630.001157
ORF1ab/nsp226A26delGCA---33B.1.1.70.000003
ORF1ab/nsp226A26TGcaAca33B.1.177.600.000655
ORF1ab/nsp226A26VgCagTa33B.1.2210.000213
ORF1ab/nsp226A26VgCagTa33B.1.3510.000089
ORF1ab/nsp226A26AgcAgcG23B.1.3510.000059
ORF1ab/nsp226A26AgcAgcT13B.1.3510.00003
ORF1ab/nsp226A26VgCagTa33B.1.36.180.001261
ORF1ab/nsp226A26VgCagTa33B.1.3960.002117
ORF1ab/nsp226A26SGcaTca33B.1.4220.002437
ORF1ab/nsp226A26VgCagTa33B.1.4970.000944
ORF1ab/nsp226A26VgCagTa33B.1.5260.000071
ORF1ab/nsp226A26delGCA---33B.1.617.20.000011
ORF1ab/nsp226A26SGcaTca33C.370.000348
ORF1ab/nsp226A26TGcaAca33Q.80.000495
ORF1ab/nsp226A26EgCagAa120.055556
ORF1ab/nsp226A26KGCaAAa120.055556
ORF1ab/nsp226A26KGCAAAG120.055556
ORF1ab/nsp226A26TGcAAcG120.055556
ORF1ab/nsp226A26EgCAgAG120.055556
ORF1ab/nsp226A26VgCAgTG120.055556
ORF1ab/nsp226A26VgCagTa120.055556
ORF1ab/nsp226A26TGcaAca120.055556
ORF1ab/nsp226A26del2gCAg--22All0
ORF1ab/nsp226A26KGCaAAa12All0
ORF1ab/nsp226A26KGCAAAG12All0
ORF1ab/nsp226A26del1Gca-ca12All0
ORF1ab/nsp226A26del1gcAgc-12All0
ORF1ab/nsp226A26VgCagTa22AY.1000.000092
ORF1ab/nsp226A26TGcaAca22AY.1020.000053
ORF1ab/nsp226A26TGcaAca22AY.1110.000366
ORF1ab/nsp226A26AgcAgcG22AY.1160.000574
ORF1ab/nsp226A26VgCagTa22AY.1170.000169
ORF1ab/nsp226A26VgCagTa22AY.230.000139
ORF1ab/nsp226A26AgcAgcG22AY.230.000139
ORF1ab/nsp226A26TGcaAca22AY.260.000057
ORF1ab/nsp226A26EgCagAa22AY.260.000057
ORF1ab/nsp226A26SGcaTca22AY.290.000032
ORF1ab/nsp226A26VgCagTa22AY.29.10.000441
ORF1ab/nsp226A26TGcaAca22AY.330.000134
ORF1ab/nsp226A26EgCagAa22AY.40.000003
ORF1ab/nsp226A26SGcaTca22AY.4.2.10.000298
ORF1ab/nsp226A26TGcaAca22AY.410.000588
ORF1ab/nsp226A26VgCagTa22AY.420.00008
ORF1ab/nsp226A26GgCagGa22AY.430.000009
ORF1ab/nsp226A26SGcaTca22AY.430.000009
ORF1ab/nsp226A26SGcaTca22AY.440.000012
ORF1ab/nsp226A26VgCagTa22AY.460.000208
ORF1ab/nsp226A26VgCagTa22AY.46.20.001271
ORF1ab/nsp226A26VgCagTa22AY.46.30.001867
ORF1ab/nsp226A26VgCagTa22AY.470.000062
ORF1ab/nsp226A26TGcaAca22AY.50.000041
ORF1ab/nsp226A26AgcAgcC12AY.530.000288
ORF1ab/nsp226A26AgcAgcG12AY.530.000288
ORF1ab/nsp226A26TGcaAca22AY.75.10.000361
ORF1ab/nsp226A26delGCA---22AY.9.20.000073
ORF1ab/nsp226A26SGcaTca22AY.920.000575
ORF1ab/nsp226A26AgcAgcG22AY.98.10.000097
ORF1ab/nsp226A26TGcaAca22AY.99.20.000184
ORF1ab/nsp226A26TGcaAca22B.1.1.2220.000408
ORF1ab/nsp226A26AgcAgcG22B.1.1.280.000622
ORF1ab/nsp226A26EgCagAa22B.1.1.3010.002358
ORF1ab/nsp226A26VgCagTa22B.1.1.3060.000877
ORF1ab/nsp226A26VgCagTa22B.1.1.5190.000079
ORF1ab/nsp226A26VgCagTa22B.1.1470.001512
ORF1ab/nsp226A26AgcAgcG22B.1.1600.000062
ORF1ab/nsp226A26TGcaAca22B.1.1770.000026
ORF1ab/nsp226A26EgCagAa22B.1.2100.004264
ORF1ab/nsp226A26TGcaAca22B.1.2210.000142
ORF1ab/nsp226A26VgCagTa22B.1.2430.000139
ORF1ab/nsp226A26VgCagTa22B.1.2580.000133
ORF1ab/nsp226A26VgCagTa22B.1.258.170.000208
ORF1ab/nsp226A26VgCagTa22B.1.36.380.003284
ORF1ab/nsp226A26VgCagTa22B.1.3950.014085
ORF1ab/nsp226A26AgcAgcG22B.1.4290.000047
ORF1ab/nsp226A26VgCagTa22B.1.4680.011429
ORF1ab/nsp226A26VgCagTa22B.1.4990.002101
ORF1ab/nsp226A26VgCagTa22B.1.5240.002813
ORF1ab/nsp226A26VgCagTa22B.1.5680.002222
ORF1ab/nsp226A26TGcaAca22B.1.5950.000522
ORF1ab/nsp226A26TGcaAca22B.1.6230.001073
ORF1ab/nsp226A26VgCagTa22B.1.6370.000146
ORF1ab/nsp226A26delGCA---22N.40.008511
ORF1ab/nsp226A26delGCA---22N.60.014184
ORF1ab/nsp226A26delGCA---22P.20.000373
ORF1ab/nsp226A26VgCagTa22Q.30.00029
ORF1ab/nsp226A26VgCagTa22Q.80.00033
ORF1ab/nsp226A26AgcAgcG22Q.80.00033
ORF1ab/nsp226A26MGCAATG110.055556
ORF1ab/nsp226A26AgcAgcG110.055556
ORF1ab/nsp226A26IGCaATa110.055556
ORF1ab/nsp226A26SGcaTca11A0.000387
ORF1ab/nsp226A26AgcAgcC11A.10.000282
ORF1ab/nsp226A26delGCA---11A.2.20.001689
ORF1ab/nsp226A26AgcAgcG11A.2.50.000499
ORF1ab/nsp226A26VgCagTa11A.280.002646
ORF1ab/nsp226A26SGcaTca11A.30.002096
ORF1ab/nsp226A26MGCAATG11All0
ORF1ab/nsp226A26LGCaTTa11All0
ORF1ab/nsp226A26PGcaCca11All0
ORF1ab/nsp226A26IGCaATa11All0
ORF1ab/nsp226A26VgCagTa11AS.20.015625
ORF1ab/nsp226A26delGCA---11AY.1020.000027
ORF1ab/nsp226A26EgCagAa11AY.1030.000006
ORF1ab/nsp226A26VgCagTa11AY.1050.000643
ORF1ab/nsp226A26VgCagTa11AY.1070.000466
ORF1ab/nsp226A26TGcaAca11AY.1080.001103
ORF1ab/nsp226A26SGcaTca11AY.1100.000113
ORF1ab/nsp226A26delGCA---11AY.1110.000183
ORF1ab/nsp226A26TGcaAca11AY.1130.000142
ORF1ab/nsp226A26TGcaAca11AY.1160.000287
ORF1ab/nsp226A26AgcAgcT11AY.1170.000085
ORF1ab/nsp226A26EgCagAa11AY.1190.000035
ORF1ab/nsp226A26TGcaAca11AY.1190.000035
ORF1ab/nsp226A26VgCagTa11AY.1190.000035
ORF1ab/nsp226A26VgCagTa11AY.120.000316
ORF1ab/nsp226A26VgCagTa11AY.1200.000037
ORF1ab/nsp226A26EgCagAa11AY.120.10.000321
ORF1ab/nsp226A26EgCagAa11AY.140.000088
ORF1ab/nsp226A26AgcAgcG11AY.160.00038
ORF1ab/nsp226A26AgcAgcC11AY.240.000431
ORF1ab/nsp226A26delGCA---11AY.250.000006
ORF1ab/nsp226A26SGcaTca11AY.260.000028
ORF1ab/nsp226A26del1gcAgc-11AY.260.000028
ORF1ab/nsp226A26VgCagTa11AY.270.000065
ORF1ab/nsp226A26SGcaTca11AY.30.00001
ORF1ab/nsp226A26AgcAgcG11AY.30.00001
ORF1ab/nsp226A26AgcAgcG11AY.3.10.000085
ORF1ab/nsp226A26VgCagTa11AY.330.000067
ORF1ab/nsp226A26TGcaAca11AY.340.000097
ORF1ab/nsp226A26TGcaAca11AY.390.000025
ORF1ab/nsp226A26SGcaTca11AY.39.10.00004
ORF1ab/nsp226A26del2gCAg--11AY.40.000002
ORF1ab/nsp226A26TGcaAca11AY.4.20.000022
ORF1ab/nsp226A26SGcaTca11AY.4.50.000107
ORF1ab/nsp226A26EgCagAa11AY.440.000006
ORF1ab/nsp226A26GgCagGa11AY.450.000122
ORF1ab/nsp226A26SGcaTca11AY.450.000122
ORF1ab/nsp226A26TGcaAca11AY.450.000122
ORF1ab/nsp226A26AgcAgcT11AY.460.000104
ORF1ab/nsp226A26VgCagTa11AY.46.40.000165
ORF1ab/nsp226A26EgCagAa11AY.46.50.000198
ORF1ab/nsp226A26VgCagTa11AY.46.50.000198
ORF1ab/nsp226A26SGcaTca11AY.470.000031
ORF1ab/nsp226A26AgcAgcG11AY.50.000021
ORF1ab/nsp226A26VgCagTa11AY.530.000288
ORF1ab/nsp226A26TGcaAca11AY.60.000041
ORF1ab/nsp226A26VgCagTa11AY.680.000274
ORF1ab/nsp226A26EgCagAa11AY.700.000209
ORF1ab/nsp226A26TGcaAca11AY.750.000056
ORF1ab/nsp226A26EgCagAa11AY.890.004902
ORF1ab/nsp226A26VgCagTa11AY.980.000079
ORF1ab/nsp226A26VgCagTa11AY.98.10.000048
ORF1ab/nsp226A26SGcaTca11AY.98.10.000048
ORF1ab/nsp226A26TGcaAca11AY.98.10.000048
ORF1ab/nsp226A26VgCagTa11AY.99.20.000092
ORF1ab/nsp226A26EgCagAa11AY.99.20.000092
ORF1ab/nsp226A26AgcAgcG11AZ.20.000821
ORF1ab/nsp226A26AgcAgcC11B0.000128
ORF1ab/nsp226A26EgCagAa11B0.000128
ORF1ab/nsp226A26AgcAgcT11B.10.000009
ORF1ab/nsp226A26delGCA---11B.10.000009
ORF1ab/nsp226A26EgCagAa11B.1.10.000018
ORF1ab/nsp226A26VgCagTa11B.1.1.10.000327
ORF1ab/nsp226A26VgCagTa11B.1.1.2100.005714
ORF1ab/nsp226A26TGcaAca11B.1.1.2140.000055
ORF1ab/nsp226A26VgCagTa11B.1.1.2160.00089
ORF1ab/nsp226A26AgcAgcG11B.1.1.2160.00089
ORF1ab/nsp226A26VgCagTa11B.1.1.2220.000204
ORF1ab/nsp226A26VgCagTa11B.1.1.2630.001558
ORF1ab/nsp226A26TGcaAca11B.1.1.280.000311
ORF1ab/nsp226A26TGcaAca11B.1.1.3690.000446
ORF1ab/nsp226A26VgCagTa11B.1.1.370.000193
ORF1ab/nsp226A26delGCA---11B.1.1.370.000193
ORF1ab/nsp226A26SGcaTca11B.1.1.4090.002833
ORF1ab/nsp226A26AgcAgcG11B.1.1.4090.002833
ORF1ab/nsp226A26delGCA---11B.1.1.4200.001006
ORF1ab/nsp226A26TGcaAca11B.1.1.470.005348
ORF1ab/nsp226A26VgCagTa11B.1.1.5230.001563
ORF1ab/nsp226A26LGCaTTa11B.1.1.70.000001
ORF1ab/nsp226A26delGCA---11B.1.1.700.000341
ORF1ab/nsp226A26SGcaTca11B.1.1.700.000341
ORF1ab/nsp226A26delGCA---11B.1.1.80.003584
ORF1ab/nsp226A26SGcaTca11B.1.1280.000635
ORF1ab/nsp226A26delGCA---11B.1.1600.000031
ORF1ab/nsp226A26SGcaTca11B.1.1770.000013
ORF1ab/nsp226A26SGcaTca11B.1.177.210.000076
ORF1ab/nsp226A26delGCA---11B.1.177.440.000519
ORF1ab/nsp226A26delGCA---11B.1.177.540.000606
ORF1ab/nsp226A26AgcAgcG11B.1.177.570.000281
ORF1ab/nsp226A26VgCagTa11B.1.177.600.000218
ORF1ab/nsp226A26AgcAgcG11B.1.177.600.000218
ORF1ab/nsp226A26AgcAgcG11B.1.177.620.001192
ORF1ab/nsp226A26VgCagTa11B.1.177.80.000752
ORF1ab/nsp226A26SGcaTca11B.1.177.810.000189
ORF1ab/nsp226A26delGCA---11B.1.177.830.001481
ORF1ab/nsp226A26VgCagTa11B.1.177.850.005435
ORF1ab/nsp226A26VgCagTa11B.1.177.860.000183
ORF1ab/nsp226A26TGcaAca11B.1.1890.004292
ORF1ab/nsp226A26PGcaCca11B.1.20.000009
ORF1ab/nsp226A26delGCA---11B.1.230.006061
ORF1ab/nsp226A26AgcAgcG11B.1.2340.000132
ORF1ab/nsp226A26delGCA---11B.1.2580.000067
ORF1ab/nsp226A26TGcaAca11B.1.258.140.00098
ORF1ab/nsp226A26AgcAgcC11B.1.2980.002114
ORF1ab/nsp226A26VgCagTa11B.1.3460.001311
ORF1ab/nsp226A26TGcaAca11B.1.36.160.001425
ORF1ab/nsp226A26TGcaAca11B.1.36.170.000494
ORF1ab/nsp226A26AgcAgcC11B.1.36.170.000494
ORF1ab/nsp226A26VgCagTa11B.1.36.170.000494
ORF1ab/nsp226A26TGcaAca11B.1.36.210.00216
ORF1ab/nsp226A26AgcAgcG11B.1.36.220.001208
ORF1ab/nsp226A26TGcaAca11B.1.36.350.002604
ORF1ab/nsp226A26VgCagTa11B.1.3670.000792
ORF1ab/nsp226A26TGcaAca11B.1.3750.00082
ORF1ab/nsp226A26AgcAgcC11B.1.3910.001127
ORF1ab/nsp226A26VgCagTa11B.1.4000.000429
ORF1ab/nsp226A26EgCagAa11B.1.4270.00005
ORF1ab/nsp226A26del1Gca-ca11B.1.4270.00005
ORF1ab/nsp226A26VgCagTa11B.1.4280.00102
ORF1ab/nsp226A26delGCA---11B.1.4290.000024
ORF1ab/nsp226A26VgCagTa11B.1.4590.004082
ORF1ab/nsp226A26VgCagTa11B.1.4620.007246
ORF1ab/nsp226A26VgCagTa11B.1.5250.000113
ORF1ab/nsp226A26TGcaAca11B.1.564.10.001577
ORF1ab/nsp226A26VgCagTa11B.1.5960.000087
ORF1ab/nsp226A26TGcaAca11B.1.5960.000087
ORF1ab/nsp226A26SGcaTca11B.1.5960.000087
ORF1ab/nsp226A26VgCagTa11B.1.5990.00365
ORF1ab/nsp226A26TGcaAca11B.1.617.10.000129
ORF1ab/nsp226A26VgCagTa11B.1.617.10.000129
ORF1ab/nsp226A26del2gCAg--11B.1.617.20.000004
ORF1ab/nsp226A26delGCA---11B.1.617.30.002985
ORF1ab/nsp226A26TGcaAca11B.1.6210.000089
ORF1ab/nsp226A26EgCagAa11B.1.6230.000536
ORF1ab/nsp226A26TGcaAca11B.1.6250.002353
ORF1ab/nsp226A26AgcAgcG11B.4.50.011905
ORF1ab/nsp226A26SGcaTca11C.300.001727
ORF1ab/nsp226A26delGCA---11C.350.000774
ORF1ab/nsp226A26VgCagTa11C.370.000116
ORF1ab/nsp226A26TGcaAca11D.20.000075
ORF1ab/nsp226A26AgcAgcC11D.20.000075
ORF1ab/nsp226A26EgCagAa11P.10.000016
ORF1ab/nsp226A26delGCA---11P.10.000016
ORF1ab/nsp226A26SGcaTca11P.1.100.000269
ORF1ab/nsp226A26VgCagTa11P.1.70.000319
ORF1ab/nsp226A26VgCagTa11Q.10.000126
ORF1ab/nsp226A26AgcAgcG11Q.10.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.