CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 248 & Codon = agA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2248S248RS428RnonsynagCagA22511020.04531321547-1549

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2248S248RagCagA1022251All0.00002
ORF1ab/nsp2248S248RagCagA5647B.1.1.70.000004
ORF1ab/nsp2248S248RagCagA1338AY.430.000004
ORF1ab/nsp2248S248RagCagA3296B.1.617.20.000011
ORF1ab/nsp2248S248RagCagA196AY.40.000002
ORF1ab/nsp2248S248RagCagA4242B.1.20.00037
ORF1ab/nsp2248S248RagCagA1217B.1.3510.000357
ORF1ab/nsp2248S248RagCagA1313AY.4.20.000282
ORF1ab/nsp2248S248RagCagA27P.10.000032
ORF1ab/nsp2248S248RagCagA44B.1.4270.000202
ORF1ab/nsp2248S248RagCagA23AY.360.000296
ORF1ab/nsp2248S248RagCagA33B.1.2430.000209
ORF1ab/nsp2248S248RagCagA22B.400.000729
ORF1ab/nsp2248S248RagCagA11AY.1030.000006
ORF1ab/nsp2248S248RagCagA11AY.1090.00074
ORF1ab/nsp2248S248RagCagA11AY.120.10.000321
ORF1ab/nsp2248S248RagCagA11AY.390.000025
ORF1ab/nsp2248S248RagCagA11B.1.2390.001221
ORF1ab/nsp2248S248RagCagA11B.1.2650.001271
ORF1ab/nsp2248S248RagCagA11B.1.360.000146
ORF1ab/nsp2248S248RagCagA11B.1.3960.000706
ORF1ab/nsp2248S248RagCagA11B.1.5150.014493
ORF1ab/nsp2248S248RagCagA11B.1.5260.000024
ORF1ab/nsp2248S248RagCagA11C.370.000116
ORF1ab/nsp2248S248RagCagA11P.20.000187