CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 246 & Codon = Tgt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2246R246CR426CnonsynCgtTgt53653611541-1543

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2246R246CCgtTgt536536All0.000103
ORF1ab/nsp2246R246CCgtTgt349349B.1.36.260.997143
ORF1ab/nsp2246R246CCgtTgt2222AY.40.000034
ORF1ab/nsp2246R246CCgtTgt1818B.1.20.000158
ORF1ab/nsp2246R246CCgtTgt1313AY.430.000058
ORF1ab/nsp2246R246CCgtTgt1212B.1.36.170.005929
ORF1ab/nsp2246R246CCgtTgt1111B.1.1.70.00001
ORF1ab/nsp2246R246CCgtTgt99AY.1030.000056
ORF1ab/nsp2246R246CCgtTgt99AY.440.000055
ORF1ab/nsp2246R246CCgtTgt88B.1.360.001167
ORF1ab/nsp2246R246CCgtTgt88B.1.617.20.00003
ORF1ab/nsp2246R246CCgtTgt77B.1.10.000127
ORF1ab/nsp2246R246CCgtTgt44AY.30.00004
ORF1ab/nsp2246R246CCgtTgt44AY.350.000932
ORF1ab/nsp2246R246CCgtTgt330.166667
ORF1ab/nsp2246R246CCgtTgt33B.1.1.2140.000166
ORF1ab/nsp2246R246CCgtTgt33Q.30.000435
ORF1ab/nsp2246R246CCgtTgt22AY.1000.000092
ORF1ab/nsp2246R246CCgtTgt22AY.1020.000053
ORF1ab/nsp2246R246CCgtTgt22AY.110.002677
ORF1ab/nsp2246R246CCgtTgt22AY.1190.000071
ORF1ab/nsp2246R246CCgtTgt22AY.250.000012
ORF1ab/nsp2246R246CCgtTgt22AY.46.50.000397
ORF1ab/nsp2246R246CCgtTgt22B.10.000018
ORF1ab/nsp2246R246CCgtTgt22B.1.1770.000026
ORF1ab/nsp2246R246CCgtTgt22B.1.4290.000047
ORF1ab/nsp2246R246CCgtTgt22B.1.4560.006536
ORF1ab/nsp2246R246CCgtTgt22B.1.564.10.003155
ORF1ab/nsp2246R246CCgtTgt11A.270.001656
ORF1ab/nsp2246R246CCgtTgt11AY.1200.000037
ORF1ab/nsp2246R246CCgtTgt11AY.20.000356
ORF1ab/nsp2246R246CCgtTgt11AY.230.00007
ORF1ab/nsp2246R246CCgtTgt11AY.260.000028
ORF1ab/nsp2246R246CCgtTgt11AY.290.000016
ORF1ab/nsp2246R246CCgtTgt11AY.34.10.00051
ORF1ab/nsp2246R246CCgtTgt11AY.39.10.00004
ORF1ab/nsp2246R246CCgtTgt11AY.50.000021
ORF1ab/nsp2246R246CCgtTgt11AY.680.000274
ORF1ab/nsp2246R246CCgtTgt11AY.7.10.000113
ORF1ab/nsp2246R246CCgtTgt11AY.9.20.000037
ORF1ab/nsp2246R246CCgtTgt11B.1.1.2980.000862
ORF1ab/nsp2246R246CCgtTgt11B.1.1.3060.000438
ORF1ab/nsp2246R246CCgtTgt11B.1.1.3170.000412
ORF1ab/nsp2246R246CCgtTgt11B.1.1.3980.003226
ORF1ab/nsp2246R246CCgtTgt11B.1.1.530.013699
ORF1ab/nsp2246R246CCgtTgt11B.1.1.630.000386
ORF1ab/nsp2246R246CCgtTgt11B.1.1.740.00431
ORF1ab/nsp2246R246CCgtTgt11B.1.177.120.000152
ORF1ab/nsp2246R246CCgtTgt11B.1.2580.000067
ORF1ab/nsp2246R246CCgtTgt11B.1.2980.002114
ORF1ab/nsp2246R246CCgtTgt11B.1.3510.00003
ORF1ab/nsp2246R246CCgtTgt11B.1.351.20.000303
ORF1ab/nsp2246R246CCgtTgt11B.1.36.100.004785
ORF1ab/nsp2246R246CCgtTgt11B.1.4270.00005
ORF1ab/nsp2246R246CCgtTgt11B.1.5160.001957
ORF1ab/nsp2246R246CCgtTgt11B.1.5880.00091
ORF1ab/nsp2246R246CCgtTgt11B.1.5960.000087
ORF1ab/nsp2246R246CCgtTgt11B.1.6230.000536
ORF1ab/nsp2246R246CCgtTgt11B.400.000364