CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 225 | A225A | A405A | syn | gcC | gcT | 1955 | 1260 | 0.644501 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225A | A405A | syn | gcC | gcA | 1955 | 692 | 0.353964 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225A | A405A | syn | gcC | gcG | 1955 | 3 | 0.00153453 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225V | A405V | nonsyn | gCc | gTc | 974 | 972 | 0.997947 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225V | A405V | nonsyn | gCC | gTT | 974 | 2 | 0.00205339 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225D | A405D | nonsyn | gCc | gAc | 168 | 167 | 0.994048 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225D | A405D | nonsyn | gCC | gAT | 168 | 1 | 0.00595238 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225T | A405T | nonsyn | Gcc | Acc | 128 | 128 | 1 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225S | A405S | nonsyn | Gcc | Tcc | 83 | 83 | 1 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225del | A405del | del | GCC | --- | 50 | 50 | 1 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225P | A405P | nonsyn | Gcc | Ccc | 15 | 14 | 0.933333 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225P | A405P | nonsyn | GcC | CcT | 15 | 1 | 0.0666667 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225G | A405G | nonsyn | gCc | gGc | 5 | 4 | 0.8 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225del1 | A405del1 | del | gCc | g-c | 5 | 3 | 0.6 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225G | A405G | nonsyn | gCC | gGT | 5 | 1 | 0.2 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225del1 | A405del1 | del | GCc | -Gc | 5 | 1 | 0.2 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225del1 | A405del1 | del | Gcc | -cc | 5 | 1 | 0.2 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225E | A405E | nonsyn | gCC | gAA | 1 | 1 | 1 | 1478-1480 |
ORF1ab/nsp2 | 225 | A225del2 | A405del2 | del | GCc | --c | 1 | 1 | 1 | 1478-1480 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1260 | 1955 | All | 0.000241 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 692 | 1955 | All | 0.000132 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcG | 3 | 1955 | All | 0.000001 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 972 | 974 | All | 0.000186 |
ORF1ab/nsp2 | 225 | A225V | gCC | gTT | 2 | 974 | All | 0 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 623 | 687 | B.1.1.7 | 0.000558 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 64 | 687 | B.1.1.7 | 0.000057 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 520 | 538 | AY.43 | 0.002304 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 18 | 538 | AY.43 | 0.00008 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 190 | 200 | AY.4 | 0.000296 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 10 | 200 | AY.4 | 0.000016 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 191 | 191 | AY.29 | 0.003013 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 189 | 191 | B.1.1.7 | 0.000169 |
ORF1ab/nsp2 | 225 | A225V | gCC | gTT | 2 | 191 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 167 | 168 | All | 0.000032 |
ORF1ab/nsp2 | 225 | A225D | gCC | gAT | 1 | 168 | All | 0 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 128 | 128 | All | 0.000024 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 103 | 103 | B.1.1.453 | 0.872881 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 100 | 100 | B.1.1 | 0.001814 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 83 | 83 | All | 0.000016 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 56 | 56 | AY.44 | 0.000341 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 51 | 51 | AY.39 | 0.00126 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 50 | 50 | All | 0.00001 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 40 | 50 | B.1.617.2 | 0.000151 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 10 | 50 | B.1.617.2 | 0.000038 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 47 | 47 | B.1.617.2 | 0.000177 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 39 | 39 | B.1.1.519 | 0.001549 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 17 | 30 | B.1.160 | 0.00053 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 13 | 30 | B.1.160 | 0.000405 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 28 | 28 | AY.4 | 0.000044 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 24 | 24 | AY.3 | 0.000239 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 24 | 24 | B.1 | 0.00022 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 24 | 24 | B.1.560 | 0.111111 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 23 | 23 | AY.25 | 0.000138 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 22 | 22 | B.1 | 0.000202 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 12 | 21 | AY.44 | 0.000073 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 9 | 21 | AY.44 | 0.000055 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 21 | 21 | B.1.349 | 0.015011 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 21 | 21 | B.1.596 | 0.00183 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 16 | 19 | B.1.1 | 0.00029 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 3 | 19 | B.1.1 | 0.000054 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 19 | 19 | B.1.1.464 | 0.027982 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 14 | 15 | All | 0.000003 |
ORF1ab/nsp2 | 225 | A225P | GcC | CcT | 1 | 15 | All | 0 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 14 | 15 | AY.102 | 0.000371 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 15 | AY.102 | 0.000027 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 15 | 15 | R.1 | 0.00135 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 14 | 14 | AY.103 | 0.000087 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 14 | 14 | AY.75 | 0.000784 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 10 | 14 | B.1.2 | 0.000088 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 4 | 14 | B.1.2 | 0.000035 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 13 | 13 | AY.102 | 0.000345 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 13 | 13 | AY.26 | 0.000368 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 9 | 12 | AY.103 | 0.000056 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 3 | 12 | AY.103 | 0.000019 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 12 | 12 | AY.4 | 0.000019 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 12 | 12 | AY.45 | 0.00146 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 11 | 11 | B.1.177 | 0.000145 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 10 | 10 | AY.43 | 0.000044 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 9 | 10 | AY.98.1 | 0.000436 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 10 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 10 | 10 | D.2 | 0.00075 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 9 | 9 | AY.4.2 | 0.000195 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 9 | 9 | AY.5 | 0.000186 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 8 | 9 | B.1.351 | 0.000238 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 9 | B.1.351 | 0.00003 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 9 | 9 | P.2 | 0.00168 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 8 | 8 | AY.20 | 0.000311 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 7 | 8 | B.1.526 | 0.000165 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 8 | B.1.526 | 0.000024 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 7 | 7 | AY.16.1 | 0.003289 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 7 | 7 | B.1.1.157 | 0.006393 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 7 | 7 | B.1.36.18 | 0.002941 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 7 | B.1.429 | 0.000118 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 2 | 7 | B.1.429 | 0.000047 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | B.1.1.214 | 0.000333 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 6 | 6 | B.1.1.243 | 0.02449 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | B.1.1.519 | 0.000238 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 5 | 6 | B.1.1.7 | 0.000004 |
ORF1ab/nsp2 | 225 | A225P | GcC | CcT | 1 | 6 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | B.1.177 | 0.000079 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 6 | 6 | B.1.265 | 0.007624 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 6 | 6 | B.1.36.29 | 0.003104 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 6 | 6 | P.1.4 | 0.005859 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 6 | 6 | Q.1 | 0.000758 |
ORF1ab/nsp2 | 225 | A225G | gCc | gGc | 4 | 5 | All | 0.000001 |
ORF1ab/nsp2 | 225 | A225del1 | gCc | g-c | 3 | 5 | All | 0.000001 |
ORF1ab/nsp2 | 225 | A225del1 | GCc | -Gc | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 225 | A225G | gCC | gGT | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 225 | A225del1 | Gcc | -cc | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 4 | 5 | AY.25 | 0.000024 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 5 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | AY.32 | 0.002662 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 4 | 5 | AY.9.1 | 0.000335 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 5 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 5 | 5 | AY.9.2 | 0.000184 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | AY.99.1 | 0.007764 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | B.1.1.311 | 0.001791 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 5 | 5 | B.1.143 | 0.106383 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 5 | 5 | Q.3 | 0.000725 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 4 | 4 | B.1.1.174 | 0.013514 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 3 | AY.23 | 0.000139 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 3 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 3 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcG | 1 | 3 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 3 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 2 | 3 | AY.5 | 0.000041 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 3 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | B.1.337 | 0.01676 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | B.1.346 | 0.003932 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 3 | B.1.596 | 0.000174 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 3 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | 0.111111 | |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 2 | 2 | B.1.1.180 | 0.021505 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcG | 1 | 2 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 2 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 2 | 2 | B.1.1.412 | 0.015267 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 225 | A225G | gCc | gGc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 2 | 2 | B.1.126 | 0.002551 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.36.7 | 0.008 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.397 | 0.009709 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp2 | 225 | A225del1 | gCc | g-c | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 225 | A225E | gCC | gAA | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 225 | A225del2 | GCc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 225 | A225G | gCc | gGc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 225 | A225del2 | GCc | --c | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 225 | A225del1 | GCc | -Gc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 225 | A225G | gCc | gGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.1.506 | 0.037037 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | B.1.1.57 | 0.011494 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | B.1.160.20 | 0.008929 |
ORF1ab/nsp2 | 225 | A225del1 | gCc | g-c | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 225 | A225G | gCC | gGT | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 225 | A225del1 | Gcc | -cc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcG | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.1.403 | 0.003268 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 225 | A225T | Gcc | Acc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 225 | A225D | gCC | gAT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 225 | A225S | Gcc | Tcc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | B.28 | 0.003279 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcA | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp2 | 225 | A225D | gCc | gAc | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp2 | 225 | A225E | gCC | gAA | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp2 | 225 | A225P | Gcc | Ccc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | D.5 | 0.004975 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 225 | A225A | gcC | gcT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp2 | 225 | A225del | GCC | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp2 | 225 | A225V | gCc | gTc | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|