CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 219

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2219K219RK399RnonsynaAgaGg185318500.9983811460-1462
ORF1ab/nsp2219K219RK399RnonsynaAGaGA185320.001079331460-1462
ORF1ab/nsp2219K219RK399RnonsynAAgCGg185310.0005396651460-1462
ORF1ab/nsp2219K219NK399NnonsynaaGaaT5454830.8862391460-1462
ORF1ab/nsp2219K219NK399NnonsynaaGaaC545620.1137611460-1462
ORF1ab/nsp2219K219KK399KsynaaGaaA19019011460-1462
ORF1ab/nsp2219K219TK399TnonsynaAgaCg13813811460-1462
ORF1ab/nsp2219K219delK399deldelAAG---707011460-1462
ORF1ab/nsp2219K219EK399EnonsynAagGag262611460-1462
ORF1ab/nsp2219K219MK399MnonsynaAgaTg121211460-1462
ORF1ab/nsp2219K219del1K399del1delaaGaa-1150.4545451460-1462
ORF1ab/nsp2219K219del1K399del1delAag-ag1120.1818181460-1462
ORF1ab/nsp2219K219del1K399del1delAaG-aT1120.1818181460-1462
ORF1ab/nsp2219K219del1K399del1delAaGGa-1110.09090911460-1462
ORF1ab/nsp2219K219del1K399del1delAAg-Gg1110.09090911460-1462
ORF1ab/nsp2219K219QK399QnonsynAagCag7711460-1462
ORF1ab/nsp2219K219del2K399del2delAAg--g2211460-1462
ORF1ab/nsp2219K219GK399GnonsynAAgGGg2211460-1462
ORF1ab/nsp2219K219YK399YnonsynAaGTaT1111460-1462
ORF1ab/nsp2219K219XK399XnonsynAagTag1111460-1462

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2219K219RaAgaGg18501853All0.000354
ORF1ab/nsp2219K219RaAGaGA21853All0
ORF1ab/nsp2219K219RAAgCGg11853All0
ORF1ab/nsp2219K219RaAgaGg13001302B.1.1.70.001164
ORF1ab/nsp2219K219RAAgCGg11302B.1.1.70.000001
ORF1ab/nsp2219K219RaAGaGA11302B.1.1.70.000001
ORF1ab/nsp2219K219NaaGaaT483545All0.000092
ORF1ab/nsp2219K219NaaGaaC62545All0.000012
ORF1ab/nsp2219K219KaaGaaA190190All0.000036
ORF1ab/nsp2219K219TaAgaCg138138All0.000026
ORF1ab/nsp2219K219TaAgaCg9494AY.40.000146
ORF1ab/nsp2219K219RaAgaGg8585B.1.617.20.00032
ORF1ab/nsp2219K219delAAG---7070All0.000013
ORF1ab/nsp2219K219NaaGaaT5959AY.330.00394
ORF1ab/nsp2219K219NaaGaaC5858AY.4.50.006235
ORF1ab/nsp2219K219RaAgaGg5454B.1.1.2960.981818
ORF1ab/nsp2219K219RaAgaGg5353B.1.10.000961
ORF1ab/nsp2219K219NaaGaaT5353B.1.2580.003527
ORF1ab/nsp2219K219RaAgaGg4242AY.40.000065
ORF1ab/nsp2219K219KaaGaaA4040B.1.1.70.000036
ORF1ab/nsp2219K219RaAgaGg3838B.1.6210.003364
ORF1ab/nsp2219K219NaaGaaT3434AY.1030.000211
ORF1ab/nsp2219K219RaAgaGg2828AY.250.000168
ORF1ab/nsp2219K219RaAgaGg2828AY.430.000124
ORF1ab/nsp2219K219EAagGag2626All0.000005
ORF1ab/nsp2219K219NaaGaaT2626AY.39.10.00103
ORF1ab/nsp2219K219NaaGaaT2626AY.440.000158
ORF1ab/nsp2219K219RaAgaGg2525AY.440.000152
ORF1ab/nsp2219K219KaaGaaA2525B.10.000229
ORF1ab/nsp2219K219NaaGaaT2323B.1.617.20.000087
ORF1ab/nsp2219K219NaaGaaT2022B.10.000183
ORF1ab/nsp2219K219NaaGaaC222B.10.000018
ORF1ab/nsp2219K219NaaGaaT2121B.1.1770.000277
ORF1ab/nsp2219K219KaaGaaA2020AY.40.000031
ORF1ab/nsp2219K219NaaGaaT2020B.1.1.70.000018
ORF1ab/nsp2219K219NaaGaaT1717AY.200.000661
ORF1ab/nsp2219K219RaAgaGg1617B.1.20.000141
ORF1ab/nsp2219K219RaAGaGA117B.1.20.000009
ORF1ab/nsp2219K219NaaGaaT1616AY.250.000096
ORF1ab/nsp2219K219NaaGaaT1616AY.40.000025
ORF1ab/nsp2219K219TaAgaCg1616B.1.1.1890.024206
ORF1ab/nsp2219K219RaAgaGg1515B.10.000137
ORF1ab/nsp2219K219RaAgaGg1313AY.4.20.000282
ORF1ab/nsp2219K219delAAG---1313B.1.1.70.000012
ORF1ab/nsp2219K219RaAgaGg1313B.1.4290.000306
ORF1ab/nsp2219K219MaAgaTg1212All0.000002
ORF1ab/nsp2219K219RaAgaGg1212AY.30.000119
ORF1ab/nsp2219K219RaAgaGg1212AY.390.000297
ORF1ab/nsp2219K219delAAG---1212B.1.4290.000282
ORF1ab/nsp2219K219del1aaGaa-511All0.000001
ORF1ab/nsp2219K219del1Aag-ag211All0
ORF1ab/nsp2219K219del1AaG-aT211All0
ORF1ab/nsp2219K219del1AaGGa-111All0
ORF1ab/nsp2219K219del1AAg-Gg111All0
ORF1ab/nsp2219K219NaaGaaT1010AY.430.000044
ORF1ab/nsp2219K219RaAgaGg1010B.1.5260.000235
ORF1ab/nsp2219K219NaaGaaT88AY.116.10.002491
ORF1ab/nsp2219K219NaaGaaT88AY.130.001288
ORF1ab/nsp2219K219KaaGaaA88AY.250.000048
ORF1ab/nsp2219K219KaaGaaA88AY.30.00008
ORF1ab/nsp2219K219KaaGaaA88B.1.4290.000188
ORF1ab/nsp2219K219QAagCag77All0.000001
ORF1ab/nsp2219K219TaAgaCg77AY.1030.000043
ORF1ab/nsp2219K219NaaGaaT77B.1.1.2140.000388
ORF1ab/nsp2219K219KaaGaaA77B.1.617.20.000026
ORF1ab/nsp2219K219NaaGaaT66AY.30.00006
ORF1ab/nsp2219K219NaaGaaT66B.1.10.000109
ORF1ab/nsp2219K219RaAgaGg66B.1.1770.000079
ORF1ab/nsp2219K219NaaGaaT66P.10.000095
ORF1ab/nsp2219K219KaaGaaA55AY.430.000022
ORF1ab/nsp2219K219RaAgaGg55AY.50.000103
ORF1ab/nsp2219K219NaaGaaT55AY.710.002375
ORF1ab/nsp2219K219KaaGaaA55AY.710.002375
ORF1ab/nsp2219K219RaAgaGg55B.1.1.2320.009074
ORF1ab/nsp2219K219KaaGaaA55B.1.20.000044
ORF1ab/nsp2219K219delAAG---55B.1.617.20.000019
ORF1ab/nsp2219K219NaaGaaT55B.1.6210.000443
ORF1ab/nsp2219K219KaaGaaA55P.10.000079
ORF1ab/nsp2219K219KaaGaaA55P.1.10.001588
ORF1ab/nsp2219K219KaaGaaA55Q.10.000632
ORF1ab/nsp2219K219delAAG---440.222222
ORF1ab/nsp2219K219RaAgaGg44AY.1030.000025
ORF1ab/nsp2219K219RaAgaGg44AY.1200.000149
ORF1ab/nsp2219K219NaaGaaT44AY.290.000063
ORF1ab/nsp2219K219delAAG---44AY.4.50.00043
ORF1ab/nsp2219K219EAagGag44AY.430.000018
ORF1ab/nsp2219K219RaAgaGg44AY.920.001149
ORF1ab/nsp2219K219delAAG---44B.1.1.330.001684
ORF1ab/nsp2219K219KaaGaaA44B.1.1600.000125
ORF1ab/nsp2219K219EAagGag44B.1.2670.074074
ORF1ab/nsp2219K219NaaGaaT44B.1.3960.002823
ORF1ab/nsp2219K219KaaGaaA44D.20.0003
ORF1ab/nsp2219K219RaAgaGg44P.10.000063
ORF1ab/nsp2219K219TaAgaCg33A.270.004967
ORF1ab/nsp2219K219NaaGaaT33AU.10.003797
ORF1ab/nsp2219K219NaaGaaT33AY.230.000209
ORF1ab/nsp2219K219EAagGag33AY.40.000005
ORF1ab/nsp2219K219MaAgaTg33AY.410.000882
ORF1ab/nsp2219K219TaAgaCg33AY.470.000093
ORF1ab/nsp2219K219NaaGaaT33AY.470.000093
ORF1ab/nsp2219K219NaaGaaT33AY.50.000062
ORF1ab/nsp2219K219RaAgaGg33AY.9.20.00011
ORF1ab/nsp2219K219NaaGaaT33AY.980.000237
ORF1ab/nsp2219K219EAagGag33B.1.10.000054
ORF1ab/nsp2219K219NaaGaaT33B.1.1.280.000934
ORF1ab/nsp2219K219NaaGaaT33B.1.1.3110.001074
ORF1ab/nsp2219K219delAAG---33B.1.1.3480.002389
ORF1ab/nsp2219K219KaaGaaA33B.1.1.5190.000119
ORF1ab/nsp2219K219EAagGag33B.1.1.70.000003
ORF1ab/nsp2219K219NaaGaaT33B.1.2430.000209
ORF1ab/nsp2219K219KaaGaaA33B.1.3910.003382
ORF1ab/nsp2219K219RaAgaGg33C.360.002732
ORF1ab/nsp2219K219RaAgaGg33C.370.000348
ORF1ab/nsp2219K219QAagCag33P.10.000047
ORF1ab/nsp2219K219TaAgaCg22A0.000774
ORF1ab/nsp2219K219NaaGaaT22A.2.5.20.003145
ORF1ab/nsp2219K219del2AAg--g22All0
ORF1ab/nsp2219K219GAAgGGg22All0
ORF1ab/nsp2219K219del1aaGaa-12AU.10.001266
ORF1ab/nsp2219K219del1AaG-aT12AU.10.001266
ORF1ab/nsp2219K219NaaGaaT22AY.1020.000053
ORF1ab/nsp2219K219RaAgaGg22AY.1020.000053
ORF1ab/nsp2219K219KaaGaaA22AY.1030.000012
ORF1ab/nsp2219K219NaaGaaT22AY.1100.000225
ORF1ab/nsp2219K219KaaGaaA22AY.1170.000169
ORF1ab/nsp2219K219TaAgaCg22AY.1180.000125
ORF1ab/nsp2219K219NaaGaaT22AY.1190.000071
ORF1ab/nsp2219K219RaAgaGg22AY.1190.000071
ORF1ab/nsp2219K219EAagGag22AY.1190.000071
ORF1ab/nsp2219K219RaAgaGg22AY.120.000632
ORF1ab/nsp2219K219RaAgaGg22AY.160.000759
ORF1ab/nsp2219K219RaAgaGg22AY.200.000078
ORF1ab/nsp2219K219RaAgaGg22AY.260.000057
ORF1ab/nsp2219K219RaAgaGg22AY.370.000632
ORF1ab/nsp2219K219NaaGaaT22AY.390.000049
ORF1ab/nsp2219K219KaaGaaA22AY.440.000012
ORF1ab/nsp2219K219RaAgaGg22AY.46.40.000329
ORF1ab/nsp2219K219NaaGaaT22AY.750.000112
ORF1ab/nsp2219K219NaaGaaT22AY.98.10.000097
ORF1ab/nsp2219K219delAAG---22B.10.000018
ORF1ab/nsp2219K219delAAG---22B.1.1.2840.000215
ORF1ab/nsp2219K219RaAgaGg22B.1.1600.000062
ORF1ab/nsp2219K219RaAgaGg22B.1.177.500.00939
ORF1ab/nsp2219K219RaAgaGg22B.1.2580.000133
ORF1ab/nsp2219K219RaAgaGg22B.1.3510.000059
ORF1ab/nsp2219K219TaAgaCg22B.1.3690.00057
ORF1ab/nsp2219K219RaAgaGg22B.1.4270.000101
ORF1ab/nsp2219K219NaaGaaT22B.1.4290.000047
ORF1ab/nsp2219K219NaaGaaT22B.1.4480.005249
ORF1ab/nsp2219K219KaaGaaA22B.1.5260.000047
ORF1ab/nsp2219K219del1aaGaa-12B.1.617.20.000004
ORF1ab/nsp2219K219del1AAg-Gg12B.1.617.20.000004
ORF1ab/nsp2219K219RaAgaGg22B.1.6230.001073
ORF1ab/nsp2219K219RaAgaGg22B.1.6370.000146
ORF1ab/nsp2219K219RaAgaGg22D.20.00015
ORF1ab/nsp2219K219delAAG---22N.60.014184
ORF1ab/nsp2219K219NaaGaaT22P.1.140.000096
ORF1ab/nsp2219K219delAAG---22P.20.000373
ORF1ab/nsp2219K219NaaGaaT11A0.000387
ORF1ab/nsp2219K219RaAgaGg11A.20.000662
ORF1ab/nsp2219K219KaaGaaA11A.2.5.10.004808
ORF1ab/nsp2219K219NaaGaaT11A.30.002096
ORF1ab/nsp2219K219NaaGaaT11A.90.045455
ORF1ab/nsp2219K219KaaGaaA11AD.20.000219
ORF1ab/nsp2219K219YAaGTaT11All0
ORF1ab/nsp2219K219XAagTag11All0
ORF1ab/nsp2219K219RaAgaGg11AT.10.005128
ORF1ab/nsp2219K219RaAgaGg11AY.1000.000046
ORF1ab/nsp2219K219KaaGaaA11AY.1000.000046
ORF1ab/nsp2219K219KaaGaaA11AY.1020.000027
ORF1ab/nsp2219K219del2AAg--g11AY.1030.000006
ORF1ab/nsp2219K219delAAG---11AY.1030.000006
ORF1ab/nsp2219K219NaaGaaT11AY.1050.000643
ORF1ab/nsp2219K219NaaGaaT11AY.1080.001103
ORF1ab/nsp2219K219RaAgaGg11AY.1110.000183
ORF1ab/nsp2219K219KaaGaaA11AY.1130.000142
ORF1ab/nsp2219K219NaaGaaT11AY.1160.000287
ORF1ab/nsp2219K219NaaGaaT11AY.1180.000063
ORF1ab/nsp2219K219del1AaG-aT11AY.1190.000035
ORF1ab/nsp2219K219delAAG---11AY.1200.000037
ORF1ab/nsp2219K219KaaGaaA11AY.1210.000135
ORF1ab/nsp2219K219NaaGaaT11AY.1210.000135
ORF1ab/nsp2219K219RaAgaGg11AY.140.000088
ORF1ab/nsp2219K219NaaGaaT11AY.140.000088
ORF1ab/nsp2219K219NaaGaaT11AY.160.00038
ORF1ab/nsp2219K219delAAG---11AY.190.00114
ORF1ab/nsp2219K219RaAgaGg11AY.230.00007
ORF1ab/nsp2219K219del2AAg--g11AY.240.000431
ORF1ab/nsp2219K219delAAG---11AY.250.000006
ORF1ab/nsp2219K219EAagGag11AY.250.000006
ORF1ab/nsp2219K219NaaGaaT11AY.260.000028
ORF1ab/nsp2219K219TaAgaCg11AY.260.000028
ORF1ab/nsp2219K219delAAG---11AY.290.000016
ORF1ab/nsp2219K219del1aaGaa-11AY.30.00001
ORF1ab/nsp2219K219EAagGag11AY.30.00001
ORF1ab/nsp2219K219RaAgaGg11AY.3.10.000085
ORF1ab/nsp2219K219RaAgaGg11AY.320.000532
ORF1ab/nsp2219K219KaaGaaA11AY.390.000025
ORF1ab/nsp2219K219delAAG---11AY.40.000002
ORF1ab/nsp2219K219QAagCag11AY.40.000002
ORF1ab/nsp2219K219KaaGaaA11AY.4.20.000022
ORF1ab/nsp2219K219NaaGaaT11AY.400.000964
ORF1ab/nsp2219K219KaaGaaA11AY.420.00004
ORF1ab/nsp2219K219EAagGag11AY.420.00004
ORF1ab/nsp2219K219delAAG---11AY.430.000004
ORF1ab/nsp2219K219QAagCag11AY.430.000004
ORF1ab/nsp2219K219del1AaGGa-11AY.440.000006
ORF1ab/nsp2219K219NaaGaaT11AY.460.000104
ORF1ab/nsp2219K219EAagGag11AY.470.000031
ORF1ab/nsp2219K219delAAG---11AY.60.000041
ORF1ab/nsp2219K219KaaGaaA11AY.610.000105
ORF1ab/nsp2219K219NaaGaaT11AY.690.000187
ORF1ab/nsp2219K219RaAgaGg11AY.740.000116
ORF1ab/nsp2219K219KaaGaaA11AY.750.000056
ORF1ab/nsp2219K219RaAgaGg11AY.90.000068
ORF1ab/nsp2219K219NaaGaaT11AY.9.10.000084
ORF1ab/nsp2219K219NaaGaaT11AY.9.20.000037
ORF1ab/nsp2219K219RaAgaGg11AY.990.001049
ORF1ab/nsp2219K219NaaGaaT11AY.99.20.000092
ORF1ab/nsp2219K219NaaGaaT11B0.000128
ORF1ab/nsp2219K219MaAgaTg11B.10.000009
ORF1ab/nsp2219K219del1Aag-ag11B.10.000009
ORF1ab/nsp2219K219TaAgaCg11B.1.10.000018
ORF1ab/nsp2219K219NaaGaaT11B.1.1.10.000327
ORF1ab/nsp2219K219KaaGaaA11B.1.1.1350.004695
ORF1ab/nsp2219K219RaAgaGg11B.1.1.1390.022727
ORF1ab/nsp2219K219RaAgaGg11B.1.1.2160.00089
ORF1ab/nsp2219K219NaaGaaT11B.1.1.2730.006757
ORF1ab/nsp2219K219NaaGaaT11B.1.1.2790.001121
ORF1ab/nsp2219K219delAAG---11B.1.1.280.000311
ORF1ab/nsp2219K219RaAgaGg11B.1.1.280.000311
ORF1ab/nsp2219K219delAAG---11B.1.1.3150.008475
ORF1ab/nsp2219K219RaAgaGg11B.1.1.3180.000302
ORF1ab/nsp2219K219RaAgaGg11B.1.1.3290.003846
ORF1ab/nsp2219K219NaaGaaT11B.1.1.3690.000446
ORF1ab/nsp2219K219NaaGaaT11B.1.1.370.000193
ORF1ab/nsp2219K219RaAgaGg11B.1.1.4090.002833
ORF1ab/nsp2219K219NaaGaaT11B.1.1.4200.001006
ORF1ab/nsp2219K219YAaGTaT11B.1.1.4200.001006
ORF1ab/nsp2219K219XAagTag11B.1.1.4200.001006
ORF1ab/nsp2219K219NaaGaaT11B.1.1.4860.001577
ORF1ab/nsp2219K219NaaGaaT11B.1.1.5190.00004
ORF1ab/nsp2219K219KaaGaaA11B.1.1.560.017857
ORF1ab/nsp2219K219TaAgaCg11B.1.1.70.000001
ORF1ab/nsp2219K219MaAgaTg11B.1.1100.004525
ORF1ab/nsp2219K219RaAgaGg11B.1.110.30.000718
ORF1ab/nsp2219K219delAAG---11B.1.110.30.000718
ORF1ab/nsp2219K219RaAgaGg11B.1.1110.001175
ORF1ab/nsp2219K219delAAG---11B.1.1400.018868
ORF1ab/nsp2219K219NaaGaaC11B.1.1600.000031
ORF1ab/nsp2219K219MaAgaTg11B.1.160.160.000929
ORF1ab/nsp2219K219MaAgaTg11B.1.160.90.007194
ORF1ab/nsp2219K219QAagCag11B.1.1770.000013
ORF1ab/nsp2219K219TaAgaCg11B.1.1770.000013
ORF1ab/nsp2219K219KaaGaaA11B.1.177.210.000076
ORF1ab/nsp2219K219RaAgaGg11B.1.177.210.000076
ORF1ab/nsp2219K219RaAgaGg11B.1.177.650.000665
ORF1ab/nsp2219K219del1aaGaa-11B.1.177.70.000165
ORF1ab/nsp2219K219RaAgaGg11B.1.177.70.000165
ORF1ab/nsp2219K219delAAG---11B.1.177.730.000566
ORF1ab/nsp2219K219TaAgaCg11B.1.20.000009
ORF1ab/nsp2219K219NaaGaaT11B.1.20.000009
ORF1ab/nsp2219K219MaAgaTg11B.1.20.000009
ORF1ab/nsp2219K219EAagGag11B.1.20.000009
ORF1ab/nsp2219K219del1Aag-ag11B.1.20.000009
ORF1ab/nsp2219K219RaAgaGg11B.1.2210.000071
ORF1ab/nsp2219K219TaAgaCg11B.1.2210.000071
ORF1ab/nsp2219K219TaAgaCg11B.1.221.40.004167
ORF1ab/nsp2219K219KaaGaaA11B.1.2340.000132
ORF1ab/nsp2219K219NaaGaaT11B.1.2340.000132
ORF1ab/nsp2219K219RaAgaGg11B.1.2370.004975
ORF1ab/nsp2219K219delAAG---11B.1.2420.018868
ORF1ab/nsp2219K219EAagGag11B.1.258.50.008772
ORF1ab/nsp2219K219NaaGaaT11B.1.3110.000275
ORF1ab/nsp2219K219KaaGaaA11B.1.3510.00003
ORF1ab/nsp2219K219NaaGaaT11B.1.3510.00003
ORF1ab/nsp2219K219GAAgGGg11B.1.351.10.038462
ORF1ab/nsp2219K219RaAgaGg11B.1.351.30.000876
ORF1ab/nsp2219K219NaaGaaT11B.1.360.000146
ORF1ab/nsp2219K219NaaGaaT11B.1.36.290.000517
ORF1ab/nsp2219K219EAagGag11B.1.36.350.002604
ORF1ab/nsp2219K219NaaGaaT11B.1.36.350.002604
ORF1ab/nsp2219K219NaaGaaT11B.1.36.80.001
ORF1ab/nsp2219K219KaaGaaA11B.1.3670.000792
ORF1ab/nsp2219K219RaAgaGg11B.1.3670.000792
ORF1ab/nsp2219K219RaAgaGg11B.1.3990.001934
ORF1ab/nsp2219K219MaAgaTg11B.1.4030.003268
ORF1ab/nsp2219K219NaaGaaT11B.1.4090.000781
ORF1ab/nsp2219K219KaaGaaA11B.1.4270.00005
ORF1ab/nsp2219K219delAAG---11B.1.4270.00005
ORF1ab/nsp2219K219MaAgaTg11B.1.4290.000024
ORF1ab/nsp2219K219NaaGaaT11B.1.5250.000113
ORF1ab/nsp2219K219NaaGaaT11B.1.5640.000426
ORF1ab/nsp2219K219KaaGaaA11B.1.5750.000303
ORF1ab/nsp2219K219MaAgaTg11B.1.5950.000261
ORF1ab/nsp2219K219NaaGaaT11B.1.5960.000087
ORF1ab/nsp2219K219RaAgaGg11B.1.617.10.000129
ORF1ab/nsp2219K219NaaGaaT11B.1.617.10.000129
ORF1ab/nsp2219K219TaAgaCg11B.1.617.20.000004
ORF1ab/nsp2219K219MaAgaTg11B.1.6210.000089
ORF1ab/nsp2219K219delAAG---11B.1.6210.000089
ORF1ab/nsp2219K219KaaGaaA11B.1.6250.002353
ORF1ab/nsp2219K219KaaGaaA11B.1.6340.003425
ORF1ab/nsp2219K219QAagCag11B.290.003509
ORF1ab/nsp2219K219KaaGaaA11B.40.002208
ORF1ab/nsp2219K219NaaGaaC11C.160.00106
ORF1ab/nsp2219K219del1aaGaa-11C.370.000116
ORF1ab/nsp2219K219RaAgaGg11D.50.004975
ORF1ab/nsp2219K219GAAgGGg11P.10.000016
ORF1ab/nsp2219K219RaAgaGg11P.1.140.000048
ORF1ab/nsp2219K219TaAgaCg11P.1.140.000048
ORF1ab/nsp2219K219RaAgaGg11P.1.170.000162
ORF1ab/nsp2219K219RaAgaGg11P.1.70.000319
ORF1ab/nsp2219K219RaAgaGg11P.20.000187
ORF1ab/nsp2219K219delAAG---11Q.10.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.