CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 218 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2218R218LR398LnonsyncGtcTt47547511457-1459

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2218R218LcGtcTt475475All0.000091
ORF1ab/nsp2218R218LcGtcTt308308AY.30.003063
ORF1ab/nsp2218R218LcGtcTt4646B.1.1.70.000041
ORF1ab/nsp2218R218LcGtcTt3636AY.130.005795
ORF1ab/nsp2218R218LcGtcTt1313AY.260.000368
ORF1ab/nsp2218R218LcGtcTt1010AY.200.000389
ORF1ab/nsp2218R218LcGtcTt66B0.000767
ORF1ab/nsp2218R218LcGtcTt44AY.250.000024
ORF1ab/nsp2218R218LcGtcTt44B.1.1600.000125
ORF1ab/nsp2218R218LcGtcTt33AY.290.000047
ORF1ab/nsp2218R218LcGtcTt33AY.40.000005
ORF1ab/nsp2218R218LcGtcTt33AY.460.000312
ORF1ab/nsp2218R218LcGtcTt33B.10.000027
ORF1ab/nsp2218R218LcGtcTt22AY.1020.000053
ORF1ab/nsp2218R218LcGtcTt22AY.300.000791
ORF1ab/nsp2218R218LcGtcTt22B.1.10.000036
ORF1ab/nsp2218R218LcGtcTt22B.1.360.000292
ORF1ab/nsp2218R218LcGtcTt22B.1.5260.000047
ORF1ab/nsp2218R218LcGtcTt22B.6.60.001778
ORF1ab/nsp2218R218LcGtcTt22D.20.00015
ORF1ab/nsp2218R218LcGtcTt11AY.1030.000006
ORF1ab/nsp2218R218LcGtcTt11AY.1170.000085
ORF1ab/nsp2218R218LcGtcTt11AY.1190.000035
ORF1ab/nsp2218R218LcGtcTt11AY.1210.000135
ORF1ab/nsp2218R218LcGtcTt11AY.270.000065
ORF1ab/nsp2218R218LcGtcTt11AY.380.000499
ORF1ab/nsp2218R218LcGtcTt11AY.420.00004
ORF1ab/nsp2218R218LcGtcTt11AY.430.000004
ORF1ab/nsp2218R218LcGtcTt11AY.440.000006
ORF1ab/nsp2218R218LcGtcTt11AY.520.000814
ORF1ab/nsp2218R218LcGtcTt11AY.750.000056
ORF1ab/nsp2218R218LcGtcTt11AY.920.000287
ORF1ab/nsp2218R218LcGtcTt11AY.930.000273
ORF1ab/nsp2218R218LcGtcTt11B.1.20.000009
ORF1ab/nsp2218R218LcGtcTt11B.1.2340.000132
ORF1ab/nsp2218R218LcGtcTt11B.1.4170.028571
ORF1ab/nsp2218R218LcGtcTt11B.1.4290.000024
ORF1ab/nsp2218R218LcGtcTt11B.1.5170.000427
ORF1ab/nsp2218R218LcGtcTt11B.1.5610.000397
ORF1ab/nsp2218R218LcGtcTt11B.1.5960.000087
ORF1ab/nsp2218R218LcGtcTt11B.1.617.20.000004
ORF1ab/nsp2218R218LcGtcTt11P.1.140.000048