CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 218 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2218R218HR398HnonsyncGtcAt5805770.9948281457-1459

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2218R218HcGtcAt577580All0.00011
ORF1ab/nsp2218R218HcGtcAt9596B.1.1.70.000085
ORF1ab/nsp2218R218HcGtcAt9595AY.40.000148
ORF1ab/nsp2218R218HcGtcAt5858B.1.4290.001365
ORF1ab/nsp2218R218HcGtcAt4949B.1.20.000431
ORF1ab/nsp2218R218HcGtcAt3434AY.430.000151
ORF1ab/nsp2218R218HcGtcAt2626B.1.617.20.000098
ORF1ab/nsp2218R218HcGtcAt2121AY.30.000209
ORF1ab/nsp2218R218HcGtcAt1717AY.440.000103
ORF1ab/nsp2218R218HcGtcAt1111AY.1030.000068
ORF1ab/nsp2218R218HcGtcAt99AY.200.00035
ORF1ab/nsp2218R218HcGtcAt88AY.230.000558
ORF1ab/nsp2218R218HcGtcAt88AY.540.000763
ORF1ab/nsp2218R218HcGtcAt77AY.420.000282
ORF1ab/nsp2218R218HcGtcAt77B.10.000064
ORF1ab/nsp2218R218HcGtcAt66B.1.177.440.003114
ORF1ab/nsp2218R218HcGtcAt66B.1.2210.000426
ORF1ab/nsp2218R218HcGtcAt55AY.1020.000133
ORF1ab/nsp2218R218HcGtcAt55AY.250.00003
ORF1ab/nsp2218R218HcGtcAt55AY.90.000338
ORF1ab/nsp2218R218HcGtcAt55AY.9.10.000419
ORF1ab/nsp2218R218HcGtcAt55B.1.4270.000252
ORF1ab/nsp2218R218HcGtcAt55P.1.150.001162
ORF1ab/nsp2218R218HcGtcAt240.111111
ORF1ab/nsp2218R218HcGtcAt44AY.50.000083
ORF1ab/nsp2218R218HcGtcAt44B.1.3960.002823
ORF1ab/nsp2218R218HcGtcAt33AY.260.000085
ORF1ab/nsp2218R218HcGtcAt33AY.450.000365
ORF1ab/nsp2218R218HcGtcAt33AY.750.000168
ORF1ab/nsp2218R218HcGtcAt33AY.99.20.000276
ORF1ab/nsp2218R218HcGtcAt33B.1.10.000054
ORF1ab/nsp2218R218HcGtcAt33B.1.2580.0002
ORF1ab/nsp2218R218HcGtcAt33B.1.3460.003932
ORF1ab/nsp2218R218HcGtcAt33B.1.3510.000089
ORF1ab/nsp2218R218HcGtcAt33B.1.5260.000071
ORF1ab/nsp2218R218HcGtcAt33B.1.5670.01
ORF1ab/nsp2218R218HcGtcAt22AY.1000.000092
ORF1ab/nsp2218R218HcGtcAt22AY.1130.000285
ORF1ab/nsp2218R218HcGtcAt22AY.46.40.000329
ORF1ab/nsp2218R218HcGtcAt22B.1.1.2140.000111
ORF1ab/nsp2218R218HcGtcAt22B.1.1770.000026
ORF1ab/nsp2218R218HcGtcAt11AY.1050.000643
ORF1ab/nsp2218R218HcGtcAt11AY.1140.000231
ORF1ab/nsp2218R218HcGtcAt11AY.1160.000287
ORF1ab/nsp2218R218HcGtcAt11AY.1170.000085
ORF1ab/nsp2218R218HcGtcAt11AY.130.000161
ORF1ab/nsp2218R218HcGtcAt11AY.140.000088
ORF1ab/nsp2218R218HcGtcAt11AY.16.10.00047
ORF1ab/nsp2218R218HcGtcAt11AY.270.000065
ORF1ab/nsp2218R218HcGtcAt11AY.290.000016
ORF1ab/nsp2218R218HcGtcAt11AY.3.10.000085
ORF1ab/nsp2218R218HcGtcAt11AY.320.000532
ORF1ab/nsp2218R218HcGtcAt11AY.390.000025
ORF1ab/nsp2218R218HcGtcAt11AY.4.50.000107
ORF1ab/nsp2218R218HcGtcAt11AY.500.000799
ORF1ab/nsp2218R218HcGtcAt11AY.60.000041
ORF1ab/nsp2218R218HcGtcAt11AY.610.000105
ORF1ab/nsp2218R218HcGtcAt11AY.620.000436
ORF1ab/nsp2218R218HcGtcAt11AY.75.10.00018
ORF1ab/nsp2218R218HcGtcAt11AY.9.20.000037
ORF1ab/nsp2218R218HcGtcAt11AY.98.10.000048
ORF1ab/nsp2218R218HcGtcAt11B.1.1.10.000327
ORF1ab/nsp2218R218HcGtcAt11B.1.1.4200.001006
ORF1ab/nsp2218R218HcGtcAt11B.1.1.4860.001577
ORF1ab/nsp2218R218HcGtcAt11B.1.1.80.003584
ORF1ab/nsp2218R218HcGtcAt11B.1.1280.000635
ORF1ab/nsp2218R218HcGtcAt11B.1.160.310.008065
ORF1ab/nsp2218R218HcGtcAt11B.1.177.160.000664
ORF1ab/nsp2218R218HcGtcAt11B.1.177.300.002513
ORF1ab/nsp2218R218HcGtcAt11B.1.177.570.000281
ORF1ab/nsp2218R218HcGtcAt11B.1.177.720.00339
ORF1ab/nsp2218R218HcGtcAt11B.1.2340.000132
ORF1ab/nsp2218R218HcGtcAt11B.1.2480.029412
ORF1ab/nsp2218R218HcGtcAt11B.1.258.170.000104
ORF1ab/nsp2218R218HcGtcAt11B.1.360.000146
ORF1ab/nsp2218R218HcGtcAt11B.1.4260.001009
ORF1ab/nsp2218R218HcGtcAt11B.1.466.20.000391
ORF1ab/nsp2218R218HcGtcAt11B.1.5610.000397
ORF1ab/nsp2218R218HcGtcAt11C.360.000911
ORF1ab/nsp2218R218HcGtcAt11P.10.000016
ORF1ab/nsp2218R218HcGtcAt11P.20.000187