CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 215

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2215T215IT395InonsynaCcaTc1312131211448-1450
ORF1ab/nsp2215T215TT395TsynacCacT4654300.9247311448-1450
ORF1ab/nsp2215T215TT395TsynacCacA465340.07311831448-1450
ORF1ab/nsp2215T215TT395TsynacCacG46510.002150541448-1450
ORF1ab/nsp2215T215AT395AnonsynAccGcc1181160.9830511448-1450
ORF1ab/nsp2215T215AT395AnonsynAcCGcT11820.01694921448-1450
ORF1ab/nsp2215T215delT395deldelACC---666611448-1450
ORF1ab/nsp2215T215NT395NnonsynaCcaAc535311448-1450
ORF1ab/nsp2215T215PT395PnonsynAccCcc1090.91448-1450
ORF1ab/nsp2215T215PT395PnonsynAcCCcA1010.11448-1450
ORF1ab/nsp2215T215VT395VnonsynACCGTG2211448-1450
ORF1ab/nsp2215T215ET395EnonsynACCGAG2211448-1450
ORF1ab/nsp2215T215QT395QnonsynACCCAG2211448-1450
ORF1ab/nsp2215T215ST395SnonsynAccTcc2211448-1450
ORF1ab/nsp2215T215LT395LnonsynACCCTG2211448-1450
ORF1ab/nsp2215T215KT395KnonsynaCCaAA1111448-1450
ORF1ab/nsp2215T215FT395FnonsynACcTTc1111448-1450

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2215T215IaCcaTc13121312All0.000251
ORF1ab/nsp2215T215IaCcaTc484484B.1.617.20.001822
ORF1ab/nsp2215T215TacCacT430465All0.000082
ORF1ab/nsp2215T215TacCacA34465All0.000007
ORF1ab/nsp2215T215TacCacG1465All0
ORF1ab/nsp2215T215IaCcaTc141141B.1.1.5280.677885
ORF1ab/nsp2215T215AAccGcc116118All0.000022
ORF1ab/nsp2215T215AAcCGcT2118All0
ORF1ab/nsp2215T215IaCcaTc9292AY.40.000143
ORF1ab/nsp2215T215IaCcaTc8484AY.1020.002227
ORF1ab/nsp2215T215TacCacT7781B.1.1.70.000069
ORF1ab/nsp2215T215TacCacA481B.1.1.70.000004
ORF1ab/nsp2215T215IaCcaTc7676B.1.1.70.000068
ORF1ab/nsp2215T215delACC---6666All0.000013
ORF1ab/nsp2215T215TacCacT6062AY.40.000093
ORF1ab/nsp2215T215TacCacA262AY.40.000003
ORF1ab/nsp2215T215NaCcaAc5353All0.00001
ORF1ab/nsp2215T215AAccGcc4848B.1.258.170.004991
ORF1ab/nsp2215T215IaCcaTc4242AY.430.000186
ORF1ab/nsp2215T215IaCcaTc4242AY.990.044071
ORF1ab/nsp2215T215TacCacT2730AY.1030.000168
ORF1ab/nsp2215T215TacCacA330AY.1030.000019
ORF1ab/nsp2215T215IaCcaTc2828AY.1030.000174
ORF1ab/nsp2215T215IaCcaTc2626AY.250.000156
ORF1ab/nsp2215T215TacCacT2525AY.250.00015
ORF1ab/nsp2215T215TacCacT2023B.1.617.20.000075
ORF1ab/nsp2215T215TacCacA223B.1.617.20.000008
ORF1ab/nsp2215T215TacCacG123B.1.617.20.000004
ORF1ab/nsp2215T215TacCacT2222AY.120.10.007063
ORF1ab/nsp2215T215IaCcaTc2222B.1.4290.000518
ORF1ab/nsp2215T215IaCcaTc2121B.1.1770.000277
ORF1ab/nsp2215T215AAccGcc2121P.1.100.005659
ORF1ab/nsp2215T215IaCcaTc2020AY.1060.006698
ORF1ab/nsp2215T215IaCcaTc2020AY.440.000122
ORF1ab/nsp2215T215TacCacT2020B.1.1.10.006534
ORF1ab/nsp2215T215IaCcaTc1919B.10.000174
ORF1ab/nsp2215T215IaCcaTc1616AY.200.000622
ORF1ab/nsp2215T215TacCacT815B.10.000073
ORF1ab/nsp2215T215TacCacA715B.10.000064
ORF1ab/nsp2215T215IaCcaTc1414AY.390.000346
ORF1ab/nsp2215T215delACC---1313B.1.1.70.000012
ORF1ab/nsp2215T215TacCacT1212AY.430.000053
ORF1ab/nsp2215T215delACC---1212B.1.4290.000282
ORF1ab/nsp2215T215TacCacT1111AY.440.000067
ORF1ab/nsp2215T215PAccCcc910All0.000002
ORF1ab/nsp2215T215PAcCCcA110All0
ORF1ab/nsp2215T215TacCacT1010B.1.1.5190.000397
ORF1ab/nsp2215T215AAccGcc1010B.1.1.70.000009
ORF1ab/nsp2215T215NaCcaAc1010P.10.000158
ORF1ab/nsp2215T215TacCacT99AY.9.20.000331
ORF1ab/nsp2215T215IaCcaTc99B.1.1.340.118421
ORF1ab/nsp2215T215TacCacT99B.1.20.000079
ORF1ab/nsp2215T215IaCcaTc88AY.1170.000676
ORF1ab/nsp2215T215TacCacT88AY.390.000198
ORF1ab/nsp2215T215IaCcaTc88AY.980.000632
ORF1ab/nsp2215T215IaCcaTc88B.1.20.00007
ORF1ab/nsp2215T215TacCacT57AY.1000.00023
ORF1ab/nsp2215T215TacCacA27AY.1000.000092
ORF1ab/nsp2215T215IaCcaTc77AY.460.000729
ORF1ab/nsp2215T215IaCcaTc77AY.710.003325
ORF1ab/nsp2215T215NaCcaAc77B.1.10.000127
ORF1ab/nsp2215T215TacCacT77B.1.6160.170732
ORF1ab/nsp2215T215IaCcaTc66AY.39.10.000238
ORF1ab/nsp2215T215TacCacT66B.1.36.220.007246
ORF1ab/nsp2215T215IaCcaTc66P.10.000095
ORF1ab/nsp2215T215TacCacT35AY.1020.00008
ORF1ab/nsp2215T215TacCacA25AY.1020.000053
ORF1ab/nsp2215T215IaCcaTc55AY.610.000524
ORF1ab/nsp2215T215NaCcaAc55B.10.000046
ORF1ab/nsp2215T215IaCcaTc55B.1.10.000091
ORF1ab/nsp2215T215delACC---55B.1.1.330.002104
ORF1ab/nsp2215T215TacCacT55B.1.1.3540.02193
ORF1ab/nsp2215T215NaCcaAc55B.1.1.70.000004
ORF1ab/nsp2215T215AAccGcc55B.1.1310.04386
ORF1ab/nsp2215T215IaCcaTc55B.1.1600.000156
ORF1ab/nsp2215T215IaCcaTc44AY.1000.000184
ORF1ab/nsp2215T215PAccCcc44AY.200.000155
ORF1ab/nsp2215T215IaCcaTc44AY.260.000113
ORF1ab/nsp2215T215TacCacT44AY.290.000063
ORF1ab/nsp2215T215delACC---44AY.4.50.00043
ORF1ab/nsp2215T215TacCacT44AY.460.000416
ORF1ab/nsp2215T215TacCacT44AY.600.003752
ORF1ab/nsp2215T215AAccGcc44B.10.000037
ORF1ab/nsp2215T215IaCcaTc44B.1.1.2910.00297
ORF1ab/nsp2215T215TacCacT34B.1.1770.00004
ORF1ab/nsp2215T215TacCacA14B.1.1770.000013
ORF1ab/nsp2215T215IaCcaTc44B.1.4330.01278
ORF1ab/nsp2215T215TacCacT34P.10.000047
ORF1ab/nsp2215T215TacCacA14P.10.000016
ORF1ab/nsp2215T215AAccGcc33AY.1030.000019
ORF1ab/nsp2215T215IaCcaTc33AY.1100.000338
ORF1ab/nsp2215T215IaCcaTc33AY.1160.00086
ORF1ab/nsp2215T215TacCacT33AY.1190.000106
ORF1ab/nsp2215T215AAccGcc33AY.250.000018
ORF1ab/nsp2215T215TacCacT33AY.260.000085
ORF1ab/nsp2215T215TacCacT33AY.30.00003
ORF1ab/nsp2215T215NaCcaAc33AY.30.00003
ORF1ab/nsp2215T215IaCcaTc33AY.30.00003
ORF1ab/nsp2215T215NaCcaAc33AY.40.000005
ORF1ab/nsp2215T215NaCcaAc33AY.440.000018
ORF1ab/nsp2215T215IaCcaTc33AY.50.000062
ORF1ab/nsp2215T215IaCcaTc33AY.620.001307
ORF1ab/nsp2215T215NaCcaAc33AY.700.000626
ORF1ab/nsp2215T215IaCcaTc33B.1.1.1280.021277
ORF1ab/nsp2215T215delACC---33B.1.1.3480.002389
ORF1ab/nsp2215T215AAccGcc33B.1.1770.00004
ORF1ab/nsp2215T215TacCacT33B.1.4290.000071
ORF1ab/nsp2215T215NaCcaAc33B.1.617.20.000011
ORF1ab/nsp2215T215AAccGcc33C.370.000348
ORF1ab/nsp2215T215IaCcaTc33P.1.20.003468
ORF1ab/nsp2215T215QACCCAG220.111111
ORF1ab/nsp2215T215AAcCGcT220.111111
ORF1ab/nsp2215T215LACCCTG220.111111
ORF1ab/nsp2215T215EACCGAG220.111111
ORF1ab/nsp2215T215VACCGTG220.111111
ORF1ab/nsp2215T215TacCacT220.111111
ORF1ab/nsp2215T215SAccTcc22All0
ORF1ab/nsp2215T215VACCGTG22All0
ORF1ab/nsp2215T215EACCGAG22All0
ORF1ab/nsp2215T215LACCCTG22All0
ORF1ab/nsp2215T215QACCCAG22All0
ORF1ab/nsp2215T215NaCcaAc22AY.1030.000012
ORF1ab/nsp2215T215IaCcaTc22AY.1190.000071
ORF1ab/nsp2215T215NaCcaAc22AY.290.000032
ORF1ab/nsp2215T215TacCacT22AY.3.10.000171
ORF1ab/nsp2215T215NaCcaAc22AY.370.000632
ORF1ab/nsp2215T215TacCacA22AY.4.20.000043
ORF1ab/nsp2215T215delACC---22AY.430.000009
ORF1ab/nsp2215T215IaCcaTc22AY.5.30.000675
ORF1ab/nsp2215T215IaCcaTc22AY.540.000191
ORF1ab/nsp2215T215TacCacT22AY.690.000373
ORF1ab/nsp2215T215IaCcaTc22AY.690.000373
ORF1ab/nsp2215T215TacCacT22AY.930.000546
ORF1ab/nsp2215T215delACC---22B.10.000018
ORF1ab/nsp2215T215TacCacT22B.1.10.000036
ORF1ab/nsp2215T215AAccGcc22B.1.10.000036
ORF1ab/nsp2215T215IaCcaTc22B.1.1.2220.000408
ORF1ab/nsp2215T215delACC---22B.1.1.2840.000215
ORF1ab/nsp2215T215PAccCcc22B.1.1.630.000772
ORF1ab/nsp2215T215IaCcaTc22B.1.1.700.000682
ORF1ab/nsp2215T215IaCcaTc22B.1.177.440.001038
ORF1ab/nsp2215T215IaCcaTc22B.1.2210.000142
ORF1ab/nsp2215T215IaCcaTc22B.1.2340.000264
ORF1ab/nsp2215T215TacCacT22B.1.2430.000139
ORF1ab/nsp2215T215IaCcaTc22B.1.3060.011429
ORF1ab/nsp2215T215IaCcaTc22B.1.3510.000059
ORF1ab/nsp2215T215TacCacT22B.1.3510.000059
ORF1ab/nsp2215T215TacCacA22B.1.351.30.001753
ORF1ab/nsp2215T215TacCacT22B.1.4270.000101
ORF1ab/nsp2215T215AAccGcc22B.1.4290.000047
ORF1ab/nsp2215T215IaCcaTc22B.1.4990.002101
ORF1ab/nsp2215T215NaCcaAc22B.1.4990.002101
ORF1ab/nsp2215T215TacCacA22C.140.008658
ORF1ab/nsp2215T215delACC---22N.60.014184
ORF1ab/nsp2215T215delACC---22P.20.000373
ORF1ab/nsp2215T215TacCacT11A.60.005128
ORF1ab/nsp2215T215FACcTTc11All0
ORF1ab/nsp2215T215KaCCaAA11All0
ORF1ab/nsp2215T215TacCacT11AY.1010.00049
ORF1ab/nsp2215T215NaCcaAc11AY.1020.000027
ORF1ab/nsp2215T215delACC---11AY.1030.000006
ORF1ab/nsp2215T215TacCacT11AY.1070.000466
ORF1ab/nsp2215T215IaCcaTc11AY.1070.000466
ORF1ab/nsp2215T215TacCacT11AY.1080.001103
ORF1ab/nsp2215T215TacCacT11AY.1130.000142
ORF1ab/nsp2215T215IaCcaTc11AY.1140.000231
ORF1ab/nsp2215T215TacCacT11AY.1140.000231
ORF1ab/nsp2215T215AAccGcc11AY.1170.000085
ORF1ab/nsp2215T215IaCcaTc11AY.1180.000063
ORF1ab/nsp2215T215TacCacA11AY.120.000316
ORF1ab/nsp2215T215IaCcaTc11AY.1200.000037
ORF1ab/nsp2215T215delACC---11AY.1200.000037
ORF1ab/nsp2215T215IaCcaTc11AY.120.10.000321
ORF1ab/nsp2215T215TacCacT11AY.160.00038
ORF1ab/nsp2215T215delACC---11AY.190.00114
ORF1ab/nsp2215T215IaCcaTc11AY.230.00007
ORF1ab/nsp2215T215delACC---11AY.250.000006
ORF1ab/nsp2215T215TacCacT11AY.270.000065
ORF1ab/nsp2215T215IaCcaTc11AY.290.000016
ORF1ab/nsp2215T215TacCacT11AY.300.000396
ORF1ab/nsp2215T215TacCacT11AY.330.000067
ORF1ab/nsp2215T215IaCcaTc11AY.330.000067
ORF1ab/nsp2215T215TacCacT11AY.340.000097
ORF1ab/nsp2215T215AAccGcc11AY.390.000025
ORF1ab/nsp2215T215TacCacT11AY.39.10.00004
ORF1ab/nsp2215T215delACC---11AY.40.000002
ORF1ab/nsp2215T215KaCCaAA11AY.400.000964
ORF1ab/nsp2215T215IaCcaTc11AY.420.00004
ORF1ab/nsp2215T215SAccTcc11AY.430.000004
ORF1ab/nsp2215T215IaCcaTc11AY.46.20.000635
ORF1ab/nsp2215T215TacCacT11AY.46.30.000934
ORF1ab/nsp2215T215AAccGcc11AY.470.000031
ORF1ab/nsp2215T215TacCacT11AY.50.000021
ORF1ab/nsp2215T215TacCacT11AY.5.30.000337
ORF1ab/nsp2215T215IaCcaTc11AY.5.40.000277
ORF1ab/nsp2215T215TacCacT11AY.510.000909
ORF1ab/nsp2215T215TacCacT11AY.540.000095
ORF1ab/nsp2215T215delACC---11AY.60.000041
ORF1ab/nsp2215T215TacCacT11AY.610.000105
ORF1ab/nsp2215T215IaCcaTc11AY.740.000116
ORF1ab/nsp2215T215delACC---11AY.750.000056
ORF1ab/nsp2215T215IaCcaTc11AY.750.000056
ORF1ab/nsp2215T215IaCcaTc11AY.800.001129
ORF1ab/nsp2215T215IaCcaTc11AY.90.000068
ORF1ab/nsp2215T215TacCacT11AY.920.000287
ORF1ab/nsp2215T215TacCacT11AY.98.10.000048
ORF1ab/nsp2215T215TacCacT11AY.99.20.000092
ORF1ab/nsp2215T215IaCcaTc11B0.000128
ORF1ab/nsp2215T215AAccGcc11B.1.1.1610.003534
ORF1ab/nsp2215T215TacCacT11B.1.1.2140.000055
ORF1ab/nsp2215T215TacCacT11B.1.1.2910.000742
ORF1ab/nsp2215T215delACC---11B.1.1.3150.008475
ORF1ab/nsp2215T215TacCacT11B.1.1.3180.000302
ORF1ab/nsp2215T215delACC---11B.1.1.3720.000689
ORF1ab/nsp2215T215delACC---11B.1.1.4480.002033
ORF1ab/nsp2215T215AAccGcc11B.1.1.5190.00004
ORF1ab/nsp2215T215IaCcaTc11B.1.1.5190.00004
ORF1ab/nsp2215T215PAcCCcA11B.1.110.30.000718
ORF1ab/nsp2215T215delACC---11B.1.1400.018868
ORF1ab/nsp2215T215AAccGcc11B.1.1600.000031
ORF1ab/nsp2215T215TacCacT11B.1.160.160.000929
ORF1ab/nsp2215T215AAccGcc11B.1.177.200.001517
ORF1ab/nsp2215T215delACC---11B.1.177.730.000566
ORF1ab/nsp2215T215TacCacT11B.1.177.750.001041
ORF1ab/nsp2215T215IaCcaTc11B.1.177.860.000183
ORF1ab/nsp2215T215NaCcaAc11B.1.20.000009
ORF1ab/nsp2215T215IaCcaTc11B.1.220.001318
ORF1ab/nsp2215T215IaCcaTc11B.1.230.006061
ORF1ab/nsp2215T215TacCacT11B.1.2340.000132
ORF1ab/nsp2215T215TacCacT11B.1.2400.000216
ORF1ab/nsp2215T215PAccCcc11B.1.2400.000216
ORF1ab/nsp2215T215IaCcaTc11B.1.2410.000812
ORF1ab/nsp2215T215delACC---11B.1.2420.018868
ORF1ab/nsp2215T215AAccGcc11B.1.2580.000067
ORF1ab/nsp2215T215TacCacT11B.1.351.20.000303
ORF1ab/nsp2215T215AAccGcc11B.1.351.20.000303
ORF1ab/nsp2215T215AAccGcc11B.1.351.50.0006
ORF1ab/nsp2215T215TacCacT11B.1.360.000146
ORF1ab/nsp2215T215IaCcaTc11B.1.36.100.004785
ORF1ab/nsp2215T215SAccTcc11B.1.36.170.000494
ORF1ab/nsp2215T215AAccGcc11B.1.36.80.001
ORF1ab/nsp2215T215TacCacA11B.1.36.80.001
ORF1ab/nsp2215T215PAccCcc11B.1.3990.001934
ORF1ab/nsp2215T215TacCacT11B.1.4000.000429
ORF1ab/nsp2215T215delACC---11B.1.4270.00005
ORF1ab/nsp2215T215IaCcaTc11B.1.466.20.000391
ORF1ab/nsp2215T215IaCcaTc11B.1.5250.000113
ORF1ab/nsp2215T215IaCcaTc11B.1.5260.000024
ORF1ab/nsp2215T215TacCacA11B.1.5760.000907
ORF1ab/nsp2215T215TacCacT11B.1.5800.004065
ORF1ab/nsp2215T215delACC---11B.1.5850.027778
ORF1ab/nsp2215T215delACC---11B.1.617.20.000004
ORF1ab/nsp2215T215FACcTTc11B.1.617.20.000004
ORF1ab/nsp2215T215AAccGcc11B.1.617.20.000004
ORF1ab/nsp2215T215delACC---11B.1.6210.000089
ORF1ab/nsp2215T215TacCacT11B.1.6280.000352
ORF1ab/nsp2215T215TacCacA11B.6.30.026316
ORF1ab/nsp2215T215TacCacT11C.80.004464
ORF1ab/nsp2215T215IaCcaTc11D.20.000075
ORF1ab/nsp2215T215PAccCcc11D.20.000075
ORF1ab/nsp2215T215TacCacT11D.20.000075
ORF1ab/nsp2215T215TacCacT11L.30.003546
ORF1ab/nsp2215T215TacCacT11P.1.120.000484
ORF1ab/nsp2215T215IaCcaTc11P.1.140.000048
ORF1ab/nsp2215T215NaCcaAc11P.1.140.000048
ORF1ab/nsp2215T215TacCacT11P.1.140.000048
ORF1ab/nsp2215T215TacCacT11P.1.170.000162
ORF1ab/nsp2215T215delACC---11Q.10.000126
ORF1ab/nsp2215T215IaCcaTc11Q.20.000613
ORF1ab/nsp2215T215IaCcaTc11Q.80.000165
ORF1ab/nsp2215T215delACC---11Q.80.000165
ORF1ab/nsp2215T215IaCcaTc11R.10.00009
ORF1ab/nsp2215T215TacCacT11R.10.00009