CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 208 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2208H208LH388LnonsyncAtcTt68610.8970591427-1429

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2208H208LcAtcTt6168All0.000012
ORF1ab/nsp2208H208LcAtcTt3535AY.260.000991
ORF1ab/nsp2208H208LcAtcTt280.111111
ORF1ab/nsp2208H208LcAtcTt77B.1.1.70.000006
ORF1ab/nsp2208H208LcAtcTt33B.1.1600.000094
ORF1ab/nsp2208H208LcAtcTt22AY.4.20.000043
ORF1ab/nsp2208H208LcAtcTt12B.1.1770.000013
ORF1ab/nsp2208H208LcAtcTt11AY.250.000006
ORF1ab/nsp2208H208LcAtcTt11AY.360.000148
ORF1ab/nsp2208H208LcAtcTt11AY.430.000004
ORF1ab/nsp2208H208LcAtcTt11AY.5.40.000277
ORF1ab/nsp2208H208LcAtcTt11AY.7.10.000113
ORF1ab/nsp2208H208LcAtcTt11AY.740.000116
ORF1ab/nsp2208H208LcAtcTt11B.1.1.500.000679
ORF1ab/nsp2208H208LcAtcTt11B.1.177.690.001484
ORF1ab/nsp2208H208LcAtcTt11B.1.20.000009
ORF1ab/nsp2208H208LcAtcTt11B.1.2340.000132
ORF1ab/nsp2208H208LcAtcTt11B.1.617.20.000004