CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 205 & Codon = Tcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2205A205SA385SnonsynGccTcc555511418-1420

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2205A205SGccTcc5555All0.000011
ORF1ab/nsp2205A205SGccTcc2020AY.40.000031
ORF1ab/nsp2205A205SGccTcc88AY.30.00008
ORF1ab/nsp2205A205SGccTcc88B.1.1.70.000007
ORF1ab/nsp2205A205SGccTcc22B.10.000018
ORF1ab/nsp2205A205SGccTcc11AY.1000.000046
ORF1ab/nsp2205A205SGccTcc11AY.1060.000335
ORF1ab/nsp2205A205SGccTcc11AY.270.000065
ORF1ab/nsp2205A205SGccTcc11AY.46.40.000165
ORF1ab/nsp2205A205SGccTcc11AY.50.000021
ORF1ab/nsp2205A205SGccTcc11AY.5.30.000337
ORF1ab/nsp2205A205SGccTcc11AY.610.000105
ORF1ab/nsp2205A205SGccTcc11AY.690.000187
ORF1ab/nsp2205A205SGccTcc11B.1.1.2400.004695
ORF1ab/nsp2205A205SGccTcc11B.1.20.000009
ORF1ab/nsp2205A205SGccTcc11B.1.2430.00007
ORF1ab/nsp2205A205SGccTcc11B.1.258.170.000104
ORF1ab/nsp2205A205SGccTcc11B.1.3510.00003
ORF1ab/nsp2205A205SGccTcc11B.1.5250.000113
ORF1ab/nsp2205A205SGccTcc11B.1.5260.000024
ORF1ab/nsp2205A205SGccTcc11B.1.617.20.000004
ORF1ab/nsp2205A205SGccTcc11D.20.000075