CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 205

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2205A205AA385AsyngcCgcT10235101360.9903271418-1420
ORF1ab/nsp2205A205AA385AsyngcCgcA10235970.009477281418-1420
ORF1ab/nsp2205A205AA385AsyngcCgcG1023520.0001954081418-1420
ORF1ab/nsp2205A205VA385VnonsyngCcgTc344234340.9976761418-1420
ORF1ab/nsp2205A205VA385VnonsyngCCgTT344280.002324231418-1420
ORF1ab/nsp2205A205TA385TnonsynGccAcc45045011418-1420
ORF1ab/nsp2205A205delA385deldelGCC---737311418-1420
ORF1ab/nsp2205A205SA385SnonsynGccTcc555511418-1420
ORF1ab/nsp2205A205GA385GnonsyngCcgGc202011418-1420
ORF1ab/nsp2205A205DA385DnonsyngCcgAc111111418-1420
ORF1ab/nsp2205A205PA385PnonsynGccCcc6611418-1420
ORF1ab/nsp2205A205del1A385del1delgCcg-c320.6666671418-1420
ORF1ab/nsp2205A205del1A385del1delGCc-Ac310.3333331418-1420
ORF1ab/nsp2205A205YA385YnonsynGCcTAc1111418-1420
ORF1ab/nsp2205A205NA385NnonsynGCcAAc1111418-1420
ORF1ab/nsp2205A205CA385CnonsynGCcTGc1111418-1420
ORF1ab/nsp2205A205del2A385del2delGCc--c1111418-1420

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2205A205AgcCgcT1013610235All0.001939
ORF1ab/nsp2205A205AgcCgcA9710235All0.000019
ORF1ab/nsp2205A205AgcCgcG210235All0
ORF1ab/nsp2205A205VgCcgTc34343442All0.000657
ORF1ab/nsp2205A205VgCCgTT83442All0.000002
ORF1ab/nsp2205A205AgcCgcT28392843B.1.617.20.01069
ORF1ab/nsp2205A205AgcCgcA42843B.1.617.20.000015
ORF1ab/nsp2205A205AgcCgcT13311342B.1.1.70.001192
ORF1ab/nsp2205A205AgcCgcA101342B.1.1.70.000009
ORF1ab/nsp2205A205AgcCgcG11342B.1.1.70.000001
ORF1ab/nsp2205A205AgcCgcT833837AY.40.001297
ORF1ab/nsp2205A205AgcCgcA4837AY.40.000006
ORF1ab/nsp2205A205VgCcgTc818818B.1.1.2790.91704
ORF1ab/nsp2205A205AgcCgcT802804AY.1020.021264
ORF1ab/nsp2205A205AgcCgcA2804AY.1020.000053
ORF1ab/nsp2205A205TGccAcc450450All0.000086
ORF1ab/nsp2205A205AgcCgcT434435P.10.006837
ORF1ab/nsp2205A205AgcCgcA1435P.10.000016
ORF1ab/nsp2205A205VgCcgTc395400AY.40.000615
ORF1ab/nsp2205A205VgCCgTT5400AY.40.000008
ORF1ab/nsp2205A205AgcCgcT369372AY.430.001635
ORF1ab/nsp2205A205AgcCgcA3372AY.430.000013
ORF1ab/nsp2205A205AgcCgcT365365B.1.1.830.98916
ORF1ab/nsp2205A205VgCcgTc365365B.1.6280.128612
ORF1ab/nsp2205A205VgCcgTc314314R.10.028263
ORF1ab/nsp2205A205VgCcgTc237237AY.250.001426
ORF1ab/nsp2205A205AgcCgcT177178AY.390.004374
ORF1ab/nsp2205A205AgcCgcA1178AY.390.000025
ORF1ab/nsp2205A205VgCcgTc178178B.1.1.70.000159
ORF1ab/nsp2205A205VgCcgTc169169P.1.140.008078
ORF1ab/nsp2205A205AgcCgcT165165AY.330.011018
ORF1ab/nsp2205A205VgCcgTc151151AY.160.057327
ORF1ab/nsp2205A205AgcCgcT142142AY.440.000864
ORF1ab/nsp2205A205AgcCgcT119130B.1.20.001048
ORF1ab/nsp2205A205AgcCgcA11130B.1.20.000097
ORF1ab/nsp2205A205AgcCgcT118118B.1.5950.030793
ORF1ab/nsp2205A205AgcCgcT113113B.1.4290.002659
ORF1ab/nsp2205A205TGccAcc109109AY.30.001084
ORF1ab/nsp2205A205AgcCgcT9495B.10.000861
ORF1ab/nsp2205A205AgcCgcA195B.10.000009
ORF1ab/nsp2205A205AgcCgcT8694AY.1030.000534
ORF1ab/nsp2205A205AgcCgcA894AY.1030.00005
ORF1ab/nsp2205A205TGccAcc9292AY.440.00056
ORF1ab/nsp2205A205AgcCgcT8686R.10.007741
ORF1ab/nsp2205A205AgcCgcT7575AY.4.20.001627
ORF1ab/nsp2205A205AgcCgcT7575B.1.2210.005327
ORF1ab/nsp2205A205delGCC---7373All0.000014
ORF1ab/nsp2205A205VgCcgTc7171B.1.10.001288
ORF1ab/nsp2205A205VgCcgTc6767AY.440.000408
ORF1ab/nsp2205A205AgcCgcT6666AY.140.005809
ORF1ab/nsp2205A205AgcCgcT6565AY.250.000391
ORF1ab/nsp2205A205AgcCgcT6363B.1.6120.167109
ORF1ab/nsp2205A205TGccAcc6161B.1.1.70.000055
ORF1ab/nsp2205A205AgcCgcT5858AY.1170.004902
ORF1ab/nsp2205A205AgcCgcT5456AY.230.003766
ORF1ab/nsp2205A205AgcCgcA256AY.230.000139
ORF1ab/nsp2205A205SGccTcc5555All0.000011
ORF1ab/nsp2205A205AgcCgcT5353AY.34.10.027027
ORF1ab/nsp2205A205AgcCgcT5052B.1.3510.001486
ORF1ab/nsp2205A205AgcCgcA252B.1.3510.000059
ORF1ab/nsp2205A205AgcCgcT4951AY.1190.00173
ORF1ab/nsp2205A205AgcCgcA251AY.1190.000071
ORF1ab/nsp2205A205AgcCgcT4546AY.30.000448
ORF1ab/nsp2205A205AgcCgcA146AY.30.00001
ORF1ab/nsp2205A205AgcCgcT4546B.1.4270.002272
ORF1ab/nsp2205A205AgcCgcA146B.1.4270.00005
ORF1ab/nsp2205A205AgcCgcT4545A.210.124654
ORF1ab/nsp2205A205AgcCgcT4444AY.1210.005954
ORF1ab/nsp2205A205VgCcgTc4444AY.46.60.003177
ORF1ab/nsp2205A205TGccAcc4444B.1.617.20.000166
ORF1ab/nsp2205A205VgCcgTc4343P.10.000677
ORF1ab/nsp2205A205VgCcgTc4242AY.4.20.000911
ORF1ab/nsp2205A205AgcCgcT4040B.1.1.10.013068
ORF1ab/nsp2205A205VgCcgTc3939B.1.617.20.000147
ORF1ab/nsp2205A205AgcCgcT3535B.1.1.250.019898
ORF1ab/nsp2205A205VgCcgTc3334AY.1030.000205
ORF1ab/nsp2205A205VgCCgTT134AY.1030.000006
ORF1ab/nsp2205A205AgcCgcT3434AY.590.018008
ORF1ab/nsp2205A205VgCcgTc3334B.1.20.000291
ORF1ab/nsp2205A205VgCCgTT134B.1.20.000009
ORF1ab/nsp2205A205VgCcgTc3333B.10.000302
ORF1ab/nsp2205A205AgcCgcT3333B.1.3690.009412
ORF1ab/nsp2205A205AgcCgcT3232B.1.1770.000421
ORF1ab/nsp2205A205AgcCgcT3030AY.1200.001115
ORF1ab/nsp2205A205AgcCgcT2626AY.470.000809
ORF1ab/nsp2205A205AgcCgcT2526B.1.10.000454
ORF1ab/nsp2205A205AgcCgcA126B.1.10.000018
ORF1ab/nsp2205A205AgcCgcT2626P.1.150.006041
ORF1ab/nsp2205A205VgCcgTc2323B.1.3510.000684
ORF1ab/nsp2205A205delGCC---2222B.1.1.70.00002
ORF1ab/nsp2205A205AgcCgcT2121AY.460.002186
ORF1ab/nsp2205A205AgcCgcT1721AY.50.000351
ORF1ab/nsp2205A205AgcCgcA421AY.50.000083
ORF1ab/nsp2205A205GgCcgGc2020All0.000004
ORF1ab/nsp2205A205SGccTcc2020AY.40.000031
ORF1ab/nsp2205A205VgCcgTc2020B.1.1770.000263
ORF1ab/nsp2205A205AgcCgcT1919AY.360.002816
ORF1ab/nsp2205A205VgCcgTc1818AY.30.000179
ORF1ab/nsp2205A205AgcCgcT1718AY.420.000684
ORF1ab/nsp2205A205AgcCgcG118AY.420.00004
ORF1ab/nsp2205A205GgCcgGc1818B.1.1.70.000016
ORF1ab/nsp2205A205AgcCgcT1818B.1.4700.025281
ORF1ab/nsp2205A205VgCcgTc1717AD.20.003722
ORF1ab/nsp2205A205AgcCgcT1717AY.200.000661
ORF1ab/nsp2205A205TGccAcc1717AY.40.000026
ORF1ab/nsp2205A205AgcCgcT1717AY.450.002069
ORF1ab/nsp2205A205AgcCgcT1717AY.730.011311
ORF1ab/nsp2205A205AgcCgcT1717C.370.001973
ORF1ab/nsp2205A205AgcCgcT1616AY.980.001264
ORF1ab/nsp2205A205AgcCgcT1616B.1.1.370.003086
ORF1ab/nsp2205A205AgcCgcT1616B.1.4020.156863
ORF1ab/nsp2205A205AgcCgcT1616B.1.5260.000376
ORF1ab/nsp2205A205AgcCgcT1515AY.1160.004302
ORF1ab/nsp2205A205VgCcgTc1515AY.430.000066
ORF1ab/nsp2205A205AgcCgcT1515AY.770.016911
ORF1ab/nsp2205A205AgcCgcT1515AY.9.20.000551
ORF1ab/nsp2205A205AgcCgcT1515B.1.177.520.026362
ORF1ab/nsp2205A205AgcCgcT1515B.1.5820.00736
ORF1ab/nsp2205A205AgcCgcT1515B.1.6210.001328
ORF1ab/nsp2205A205AgcCgcT1414AY.1000.000644
ORF1ab/nsp2205A205VgCcgTc1414AY.1020.000371
ORF1ab/nsp2205A205AgcCgcT1414AY.130.002254
ORF1ab/nsp2205A205AgcCgcT1414AY.290.000221
ORF1ab/nsp2205A205AgcCgcA1414B.1.258.170.001456
ORF1ab/nsp2205A205TGccAcc1414B.1.36.180.005882
ORF1ab/nsp2205A205AgcCgcT1414B.1.4000.006006
ORF1ab/nsp2205A205AgcCgcT1313B.1.177.790.030445
ORF1ab/nsp2205A205TGccAcc1313B.1.4290.000306
ORF1ab/nsp2205A205AgcCgcT1212AY.1110.002198
ORF1ab/nsp2205A205VgCcgTc1212AY.260.00034
ORF1ab/nsp2205A205AgcCgcT1212B.1.1.2580.039088
ORF1ab/nsp2205A205AgcCgcT1212B.1.177.810.002272
ORF1ab/nsp2205A205AgcCgcT1212B.1.2340.001583
ORF1ab/nsp2205A205TGccAcc1212B.1.3510.000357
ORF1ab/nsp2205A205AgcCgcT1212B.1.36.250.02649
ORF1ab/nsp2205A205AgcCgcT1212P.1.140.000574
ORF1ab/nsp2205A205DgCcgAc1111All0.000002
ORF1ab/nsp2205A205AgcCgcT1111AY.120.10.003531
ORF1ab/nsp2205A205VgCcgTc1111B.1.1.2220.002244
ORF1ab/nsp2205A205AgcCgcT1111B.1.36.180.004622
ORF1ab/nsp2205A205AgcCgcT1111N.50.019435
ORF1ab/nsp2205A205VgCcgTc1010AY.50.000206
ORF1ab/nsp2205A205TGccAcc1010B.10.000092
ORF1ab/nsp2205A205VgCcgTc99AY.1190.000318
ORF1ab/nsp2205A205VgCcgTc99B.1.1.3060.003946
ORF1ab/nsp2205A205AgcCgcT99B.1.177.40.0019
ORF1ab/nsp2205A205AgcCgcT99B.1.617.10.001161
ORF1ab/nsp2205A205AgcCgcT88AY.1180.000501
ORF1ab/nsp2205A205AgcCgcT58AY.260.000142
ORF1ab/nsp2205A205AgcCgcA38AY.260.000085
ORF1ab/nsp2205A205SGccTcc88AY.30.00008
ORF1ab/nsp2205A205delGCC---88AY.40.000012
ORF1ab/nsp2205A205TGccAcc88AY.430.000035
ORF1ab/nsp2205A205AgcCgcT88AY.46.60.000578
ORF1ab/nsp2205A205VgCcgTc88AY.5.30.002699
ORF1ab/nsp2205A205AgcCgcT88AY.690.001493
ORF1ab/nsp2205A205AgcCgcT88AY.840.0035
ORF1ab/nsp2205A205VgCcgTc88B.1.1.2410.016563
ORF1ab/nsp2205A205SGccTcc88B.1.1.70.000007
ORF1ab/nsp2205A205AgcCgcT78B.1.1600.000218
ORF1ab/nsp2205A205AgcCgcA18B.1.1600.000031
ORF1ab/nsp2205A205AgcCgcT78B.1.36.10.007982
ORF1ab/nsp2205A205AgcCgcA18B.1.36.10.00114
ORF1ab/nsp2205A205VgCcgTc77A.2.5.20.011006
ORF1ab/nsp2205A205AgcCgcT77AY.1090.005178
ORF1ab/nsp2205A205TGccAcc77AY.1170.000592
ORF1ab/nsp2205A205AgcCgcT77AY.29.10.001544
ORF1ab/nsp2205A205AgcCgcT77AY.340.000679
ORF1ab/nsp2205A205AgcCgcT77AY.4.50.000752
ORF1ab/nsp2205A205VgCcgTc77AY.420.000282
ORF1ab/nsp2205A205AgcCgcT77AY.60.000288
ORF1ab/nsp2205A205AgcCgcT67AY.750.000336
ORF1ab/nsp2205A205AgcCgcA17AY.750.000056
ORF1ab/nsp2205A205AgcCgcT77B.1.1.3180.002112
ORF1ab/nsp2205A205VgCcgTc77B.1.4290.000165
ORF1ab/nsp2205A205AgcCgcT77B.1.5250.000792
ORF1ab/nsp2205A205AgcCgcT77B.1.5960.00061
ORF1ab/nsp2205A205AgcCgcT77C.350.005418
ORF1ab/nsp2205A205AgcCgcT77Q.80.001154
ORF1ab/nsp2205A205AgcCgcT460.222222
ORF1ab/nsp2205A205AgcCgcA260.111111
ORF1ab/nsp2205A205PGccCcc66All0.000001
ORF1ab/nsp2205A205AgcCgcT66AY.46.40.000987
ORF1ab/nsp2205A205AgcCgcT66AY.5.30.002024
ORF1ab/nsp2205A205VgCcgTc66AY.530.001725
ORF1ab/nsp2205A205AgcCgcT66B.1.1.2770.004552
ORF1ab/nsp2205A205VgCcgTc66B.1.1.2940.007595
ORF1ab/nsp2205A205AgcCgcT66B.1.1.330.002525
ORF1ab/nsp2205A205VgCcgTc66B.1.1.5190.000238
ORF1ab/nsp2205A205AgcCgcT66B.1.2430.000418
ORF1ab/nsp2205A205AgcCgcT66B.1.2580.000399
ORF1ab/nsp2205A205AgcCgcT66B.1.466.20.002347
ORF1ab/nsp2205A205AgcCgcT66B.1.5410.026549
ORF1ab/nsp2205A205VgCcgTc66C.370.000696
ORF1ab/nsp2205A205AgcCgcT66P.20.00112
ORF1ab/nsp2205A205VgCcgTc55A.20.003309
ORF1ab/nsp2205A205AgcCgcT55AD.20.001095
ORF1ab/nsp2205A205TGccAcc55AY.1030.000031
ORF1ab/nsp2205A205VgCcgTc55AY.46.10.005133
ORF1ab/nsp2205A205AgcCgcT55AY.530.001438
ORF1ab/nsp2205A205VgCcgTc55AY.90.000338
ORF1ab/nsp2205A205AgcCgcT55AY.960.010373
ORF1ab/nsp2205A205AgcCgcT55B0.000639
ORF1ab/nsp2205A205delGCC---55B.1.1.330.002104
ORF1ab/nsp2205A205VgCcgTc55B.1.1.3370.017986
ORF1ab/nsp2205A205VgCcgTc55B.1.1.500.003394
ORF1ab/nsp2205A205AgcCgcT55B.1.1.5190.000199
ORF1ab/nsp2205A205TGccAcc55B.1.20.000044
ORF1ab/nsp2205A205TGccAcc55B.1.2390.006105
ORF1ab/nsp2205A205AgcCgcT55B.1.2410.004058
ORF1ab/nsp2205A205AgcCgcT55B.1.5160.009785
ORF1ab/nsp2205A205VgCcgTc55B.1.6210.000443
ORF1ab/nsp2205A205AgcCgcT55P.1.120.00242
ORF1ab/nsp2205A205AgcCgcT44AY.1100.000451
ORF1ab/nsp2205A205AgcCgcT34AY.39.10.000119
ORF1ab/nsp2205A205AgcCgcA14AY.39.10.00004
ORF1ab/nsp2205A205delGCC---44AY.4.50.00043
ORF1ab/nsp2205A205AgcCgcT44AY.46.20.002541
ORF1ab/nsp2205A205AgcCgcT44AY.680.001095
ORF1ab/nsp2205A205AgcCgcT44AY.7.10.000451
ORF1ab/nsp2205A205VgCcgTc44AY.750.000224
ORF1ab/nsp2205A205AgcCgcT44AY.99.20.000369
ORF1ab/nsp2205A205VgCcgTc44B.1.1.1410.008048
ORF1ab/nsp2205A205AgcCgcT44B.1.1.2220.000816
ORF1ab/nsp2205A205AgcCgcT44B.1.1.280.001245
ORF1ab/nsp2205A205VgCcgTc44B.1.1.3770.005525
ORF1ab/nsp2205A205TGccAcc44B.1.2360.008214
ORF1ab/nsp2205A205AgcCgcT44B.1.3380.034483
ORF1ab/nsp2205A205AgcCgcT44B.1.36.290.002069
ORF1ab/nsp2205A205VgCcgTc44P.30.00638
ORF1ab/nsp2205A205del1gCcg-c23All0
ORF1ab/nsp2205A205del1GCc-Ac13All0
ORF1ab/nsp2205A205VgCcgTc33AP.10.004505
ORF1ab/nsp2205A205AgcCgcT33AY.10.001187
ORF1ab/nsp2205A205TGccAcc33AY.1020.00008
ORF1ab/nsp2205A205AgcCgcT33AY.1130.000427
ORF1ab/nsp2205A205TGccAcc33AY.200.000117
ORF1ab/nsp2205A205AgcCgcT33AY.240.001293
ORF1ab/nsp2205A205VgCcgTc33AY.270.000194
ORF1ab/nsp2205A205TGccAcc33AY.390.000074
ORF1ab/nsp2205A205AgcCgcT33AY.410.000882
ORF1ab/nsp2205A205TGccAcc33AY.50.000062
ORF1ab/nsp2205A205AgcCgcT33AY.5.40.00083
ORF1ab/nsp2205A205AgcCgcT33AY.610.000314
ORF1ab/nsp2205A205AgcCgcT33AY.670.001393
ORF1ab/nsp2205A205AgcCgcT33AY.740.000347
ORF1ab/nsp2205A205AgcCgcT33AY.75.10.000541
ORF1ab/nsp2205A205AgcCgcT33AY.870.002498
ORF1ab/nsp2205A205VgCcgTc33AY.9.20.00011
ORF1ab/nsp2205A205AgcCgcT33AY.920.000862
ORF1ab/nsp2205A205AgcCgcT33AY.930.000819
ORF1ab/nsp2205A205AgcCgcT33B.1.1.2840.000322
ORF1ab/nsp2205A205delGCC---33B.1.1.3480.002389
ORF1ab/nsp2205A205AgcCgcT33B.1.1.4340.001046
ORF1ab/nsp2205A205AgcCgcT33B.1.1.5210.016043
ORF1ab/nsp2205A205delGCC---33B.1.1770.00004
ORF1ab/nsp2205A205AgcCgcA33B.1.177.230.009709
ORF1ab/nsp2205A205AgcCgcT33B.1.177.330.004934
ORF1ab/nsp2205A205AgcCgcT33B.1.177.530.007177
ORF1ab/nsp2205A205AgcCgcT33B.1.177.60.00293
ORF1ab/nsp2205A205VgCcgTc33B.1.177.70.000495
ORF1ab/nsp2205A205AgcCgcT23B.1.177.730.001133
ORF1ab/nsp2205A205AgcCgcA13B.1.177.730.000566
ORF1ab/nsp2205A205AgcCgcT33B.1.177.880.037037
ORF1ab/nsp2205A205AgcCgcT33B.1.2980.006342
ORF1ab/nsp2205A205AgcCgcT33B.1.3110.000824
ORF1ab/nsp2205A205AgcCgcT33B.1.36.80.003
ORF1ab/nsp2205A205VgCcgTc33B.1.3610.003866
ORF1ab/nsp2205A205AgcCgcT33B.1.3990.005803
ORF1ab/nsp2205A205AgcCgcT33B.1.4160.003807
ORF1ab/nsp2205A205TGccAcc33B.1.4270.000151
ORF1ab/nsp2205A205VgCcgTc33B.1.5260.000071
ORF1ab/nsp2205A205AgcCgcT33B.1.5970.013889
ORF1ab/nsp2205A205AgcCgcT33B.1.5990.010949
ORF1ab/nsp2205A205AgcCgcT23B.1.6370.000146
ORF1ab/nsp2205A205AgcCgcA13B.1.6370.000073
ORF1ab/nsp2205A205AgcCgcT33B.400.001093
ORF1ab/nsp2205A205AgcCgcT33C.320.069767
ORF1ab/nsp2205A205AgcCgcT33P.1.70.000958
ORF1ab/nsp2205A205del1gCcg-c220.111111
ORF1ab/nsp2205A205VgCcgTc22A.10.000564
ORF1ab/nsp2205A205AgcCgcT22A.2.50.000998
ORF1ab/nsp2205A205VgCcgTc22AE.10.022727
ORF1ab/nsp2205A205TGccAcc22AY.1000.000092
ORF1ab/nsp2205A205PGccCcc22AY.1030.000012
ORF1ab/nsp2205A205AgcCgcT22AY.1080.002205
ORF1ab/nsp2205A205AgcCgcT22AY.1140.000462
ORF1ab/nsp2205A205VgCcgTc22AY.1200.000074
ORF1ab/nsp2205A205delGCC---22AY.1200.000074
ORF1ab/nsp2205A205VgCcgTc22AY.16.10.00094
ORF1ab/nsp2205A205VgCcgTc22AY.200.000078
ORF1ab/nsp2205A205AgcCgcT22AY.270.000129
ORF1ab/nsp2205A205VgCcgTc22AY.290.000032
ORF1ab/nsp2205A205delGCC---22AY.30.00002
ORF1ab/nsp2205A205VgCcgTc22AY.360.000296
ORF1ab/nsp2205A205VgCcgTc22AY.390.000049
ORF1ab/nsp2205A205DgCcgAc22AY.40.000003
ORF1ab/nsp2205A205VgCcgTc22AY.400.001929
ORF1ab/nsp2205A205TGccAcc22AY.470.000062
ORF1ab/nsp2205A205AgcCgcT22AY.480.00093
ORF1ab/nsp2205A205AgcCgcT22AY.490.00639
ORF1ab/nsp2205A205AgcCgcT22AY.500.001599
ORF1ab/nsp2205A205VgCcgTc22AY.60.000082
ORF1ab/nsp2205A205VgCcgTc22AY.620.000871
ORF1ab/nsp2205A205VgCcgTc22AY.7.10.000225
ORF1ab/nsp2205A205AgcCgcT22AY.700.000417
ORF1ab/nsp2205A205AgcCgcT22AY.780.003082
ORF1ab/nsp2205A205VgCcgTc22AY.840.000875
ORF1ab/nsp2205A205AgcCgcT22AY.910.001461
ORF1ab/nsp2205A205VgCcgTc22AY.980.000158
ORF1ab/nsp2205A205AgcCgcT22AY.98.10.000097
ORF1ab/nsp2205A205AgcCgcT22AY.990.002099
ORF1ab/nsp2205A205VgCcgTc22B0.000256
ORF1ab/nsp2205A205SGccTcc22B.10.000018
ORF1ab/nsp2205A205delGCC---22B.10.000018
ORF1ab/nsp2205A205TGccAcc22B.1.10.000036
ORF1ab/nsp2205A205AgcCgcT22B.1.1.1350.00939
ORF1ab/nsp2205A205AgcCgcT22B.1.1.1630.015267
ORF1ab/nsp2205A205VgCcgTc22B.1.1.1700.002494
ORF1ab/nsp2205A205AgcCgcA22B.1.1.1890.003026
ORF1ab/nsp2205A205AgcCgcT12B.1.1.2070.001182
ORF1ab/nsp2205A205AgcCgcA12B.1.1.2070.001182
ORF1ab/nsp2205A205AgcCgcT22B.1.1.2160.001781
ORF1ab/nsp2205A205VgCcgTc22B.1.1.2980.001724
ORF1ab/nsp2205A205AgcCgcT12B.1.1.3060.000438
ORF1ab/nsp2205A205AgcCgcA12B.1.1.3060.000438
ORF1ab/nsp2205A205AgcCgcT22B.1.1.3160.00185
ORF1ab/nsp2205A205AgcCgcT22B.1.1.3260.003521
ORF1ab/nsp2205A205VgCcgTc22B.1.1.330.000842
ORF1ab/nsp2205A205AgcCgcT22B.1.1.3370.007194
ORF1ab/nsp2205A205AgcCgcT22B.1.1.3690.000892
ORF1ab/nsp2205A205AgcCgcA22B.1.1.4320.002532
ORF1ab/nsp2205A205AgcCgcT22B.1.1.5170.013605
ORF1ab/nsp2205A205AgcCgcT22B.1.177.210.000153
ORF1ab/nsp2205A205VgCcgTc22B.1.177.810.000379
ORF1ab/nsp2205A205VgCcgTc22B.1.2060.001631
ORF1ab/nsp2205A205VgCcgTc22B.1.2580.000133
ORF1ab/nsp2205A205TGccAcc22B.1.360.000292
ORF1ab/nsp2205A205VgCcgTc22B.1.3780.013699
ORF1ab/nsp2205A205AgcCgcT22B.1.3890.002004
ORF1ab/nsp2205A205VgCcgTc22B.1.4040.002604
ORF1ab/nsp2205A205VgCcgTc22B.1.4280.002041
ORF1ab/nsp2205A205AgcCgcT22B.1.438.10.000215
ORF1ab/nsp2205A205VgCcgTc22B.1.4430.009346
ORF1ab/nsp2205A205AgcCgcT22B.1.5650.001621
ORF1ab/nsp2205A205VgCcgTc22B.1.5960.000174
ORF1ab/nsp2205A205VgCcgTc22B.1.617.10.000258
ORF1ab/nsp2205A205AgcCgcT22B.1.6200.001892
ORF1ab/nsp2205A205TGccAcc22B.1.6210.000177
ORF1ab/nsp2205A205AgcCgcT22B.60.00182
ORF1ab/nsp2205A205AgcCgcT22B.6.60.001778
ORF1ab/nsp2205A205AgcCgcT22D.20.00015
ORF1ab/nsp2205A205delGCC---22N.60.014184
ORF1ab/nsp2205A205VgCcgTc22P.1.120.000968
ORF1ab/nsp2205A205delGCC---22P.20.000373
ORF1ab/nsp2205A205AgcCgcT22Q.40.00091
ORF1ab/nsp2205A205VgCcgTc11A0.000387
ORF1ab/nsp2205A205AgcCgcA11A0.000387
ORF1ab/nsp2205A205AgcCgcT11A.10.000282
ORF1ab/nsp2205A205VgCcgTc11A.2.50.000499
ORF1ab/nsp2205A205AgcCgcT11A.23.10.000704
ORF1ab/nsp2205A205VgCcgTc11AA.70.009174
ORF1ab/nsp2205A205CGCcTGc11All0
ORF1ab/nsp2205A205del2GCc--c11All0
ORF1ab/nsp2205A205YGCcTAc11All0
ORF1ab/nsp2205A205NGCcAAc11All0
ORF1ab/nsp2205A205SGccTcc11AY.1000.000046
ORF1ab/nsp2205A205VgCcgTc11AY.1000.000046
ORF1ab/nsp2205A205AgcCgcT11AY.1010.00049
ORF1ab/nsp2205A205AgcCgcT11AY.1050.000643
ORF1ab/nsp2205A205SGccTcc11AY.1060.000335
ORF1ab/nsp2205A205VgCcgTc11AY.1160.000287
ORF1ab/nsp2205A205VgCcgTc11AY.1180.000063
ORF1ab/nsp2205A205YGCcTAc11AY.1190.000035
ORF1ab/nsp2205A205TGccAcc11AY.1190.000035
ORF1ab/nsp2205A205TGccAcc11AY.1200.000037
ORF1ab/nsp2205A205VgCCgTT11AY.120.10.000321
ORF1ab/nsp2205A205AgcCgcA11AY.120.20.001285
ORF1ab/nsp2205A205VgCcgTc11AY.1210.000135
ORF1ab/nsp2205A205TGccAcc11AY.130.000161
ORF1ab/nsp2205A205DgCcgAc11AY.16.10.00047
ORF1ab/nsp2205A205AgcCgcT11AY.190.00114
ORF1ab/nsp2205A205AgcCgcT11AY.20.000356
ORF1ab/nsp2205A205VgCcgTc11AY.230.00007
ORF1ab/nsp2205A205TGccAcc11AY.250.000006
ORF1ab/nsp2205A205SGccTcc11AY.270.000065
ORF1ab/nsp2205A205DgCcgAc11AY.30.00001
ORF1ab/nsp2205A205AgcCgcT11AY.300.000396
ORF1ab/nsp2205A205AgcCgcT11AY.320.000532
ORF1ab/nsp2205A205VgCcgTc11AY.370.000316
ORF1ab/nsp2205A205AgcCgcT11AY.380.000499
ORF1ab/nsp2205A205VgCcgTc11AY.380.000499
ORF1ab/nsp2205A205VgCcgTc11AY.39.10.00004
ORF1ab/nsp2205A205TGccAcc11AY.4.20.000022
ORF1ab/nsp2205A205delGCC---11AY.430.000004
ORF1ab/nsp2205A205PGccCcc11AY.430.000004
ORF1ab/nsp2205A205DgCcgAc11AY.440.000006
ORF1ab/nsp2205A205CGCcTGc11AY.440.000006
ORF1ab/nsp2205A205del1GCc-Ac11AY.440.000006
ORF1ab/nsp2205A205VgCcgTc11AY.450.000122
ORF1ab/nsp2205A205VgCcgTc11AY.460.000104
ORF1ab/nsp2205A205AgcCgcT11AY.46.10.001027
ORF1ab/nsp2205A205VgCcgTc11AY.46.40.000165
ORF1ab/nsp2205A205SGccTcc11AY.46.40.000165
ORF1ab/nsp2205A205VgCcgTc11AY.470.000031
ORF1ab/nsp2205A205SGccTcc11AY.50.000021
ORF1ab/nsp2205A205SGccTcc11AY.5.30.000337
ORF1ab/nsp2205A205VgCcgTc11AY.540.000095
ORF1ab/nsp2205A205AgcCgcT11AY.550.000917
ORF1ab/nsp2205A205VgCcgTc11AY.550.000917
ORF1ab/nsp2205A205VgCcgTc11AY.570.000656
ORF1ab/nsp2205A205AgcCgcT11AY.570.000656
ORF1ab/nsp2205A205AgcCgcT11AY.580.000907
ORF1ab/nsp2205A205TGccAcc11AY.590.00053
ORF1ab/nsp2205A205delGCC---11AY.60.000041
ORF1ab/nsp2205A205TGccAcc11AY.60.000041
ORF1ab/nsp2205A205SGccTcc11AY.610.000105
ORF1ab/nsp2205A205GgCcgGc11AY.620.000436
ORF1ab/nsp2205A205TGccAcc11AY.620.000436
ORF1ab/nsp2205A205AgcCgcT11AY.640.000595
ORF1ab/nsp2205A205AgcCgcT11AY.650.000533
ORF1ab/nsp2205A205VgCcgTc11AY.650.000533
ORF1ab/nsp2205A205VgCcgTc11AY.680.000274
ORF1ab/nsp2205A205SGccTcc11AY.690.000187
ORF1ab/nsp2205A205TGccAcc11AY.70.000196
ORF1ab/nsp2205A205AgcCgcT11AY.70.000196
ORF1ab/nsp2205A205AgcCgcT11AY.710.000475
ORF1ab/nsp2205A205PGccCcc11AY.740.000116
ORF1ab/nsp2205A205delGCC---11AY.750.000056
ORF1ab/nsp2205A205VgCcgTc11AY.75.10.00018
ORF1ab/nsp2205A205TGccAcc11AY.770.001127
ORF1ab/nsp2205A205AgcCgcT11AY.790.001211
ORF1ab/nsp2205A205AgcCgcT11AY.820.001357
ORF1ab/nsp2205A205VgCcgTc11AY.850.000427
ORF1ab/nsp2205A205AgcCgcT11AY.850.000427
ORF1ab/nsp2205A205DgCcgAc11AY.880.000884
ORF1ab/nsp2205A205AgcCgcT11AY.890.004902
ORF1ab/nsp2205A205delGCC---11AY.9.20.000037
ORF1ab/nsp2205A205VgCcgTc11AY.99.20.000092
ORF1ab/nsp2205A205DgCcgAc11B.10.000009
ORF1ab/nsp2205A205GgCcgGc11B.10.000009
ORF1ab/nsp2205A205DgCcgAc11B.1.10.000018
ORF1ab/nsp2205A205VgCcgTc11B.1.1.1590.004673
ORF1ab/nsp2205A205VgCcgTc11B.1.1.1690.018182
ORF1ab/nsp2205A205AgcCgcT11B.1.1.1760.000439
ORF1ab/nsp2205A205AgcCgcT11B.1.1.2140.000055
ORF1ab/nsp2205A205SGccTcc11B.1.1.2400.004695
ORF1ab/nsp2205A205AgcCgcT11B.1.1.2410.00207
ORF1ab/nsp2205A205VgCcgTc11B.1.1.2650.003155
ORF1ab/nsp2205A205delGCC---11B.1.1.2840.000107
ORF1ab/nsp2205A205VgCcgTc11B.1.1.2910.000742
ORF1ab/nsp2205A205AgcCgcT11B.1.1.3110.000358
ORF1ab/nsp2205A205delGCC---11B.1.1.3150.008475
ORF1ab/nsp2205A205AgcCgcT11B.1.1.3150.008475
ORF1ab/nsp2205A205AgcCgcT11B.1.1.3720.000689
ORF1ab/nsp2205A205VgCcgTc11B.1.1.390.00051
ORF1ab/nsp2205A205VgCcgTc11B.1.1.3980.003226
ORF1ab/nsp2205A205AgcCgcT11B.1.1.4130.006897
ORF1ab/nsp2205A205AgcCgcT11B.1.1.4160.000905
ORF1ab/nsp2205A205TGccAcc11B.1.1.4290.004608
ORF1ab/nsp2205A205AgcCgcT11B.1.1.4480.002033
ORF1ab/nsp2205A205delGCC---11B.1.1.4480.002033
ORF1ab/nsp2205A205DgCcgAc11B.1.1.4820.023256
ORF1ab/nsp2205A205AgcCgcA11B.1.1.5250.005464
ORF1ab/nsp2205A205VgCcgTc11B.1.1.630.000386
ORF1ab/nsp2205A205del2GCc--c11B.1.1.70.000001
ORF1ab/nsp2205A205NGCcAAc11B.1.1.70.000001
ORF1ab/nsp2205A205AgcCgcT11B.1.1.700.000341
ORF1ab/nsp2205A205TGccAcc11B.1.110.30.000718
ORF1ab/nsp2205A205VgCcgTc11B.1.1180.006711
ORF1ab/nsp2205A205VgCcgTc11B.1.1280.000635
ORF1ab/nsp2205A205delGCC---11B.1.1400.018868
ORF1ab/nsp2205A205AgcCgcT11B.1.1470.000756
ORF1ab/nsp2205A205TGccAcc11B.1.1770.000013
ORF1ab/nsp2205A205DgCcgAc11B.1.1770.000013
ORF1ab/nsp2205A205AgcCgcT11B.1.177.100.000878
ORF1ab/nsp2205A205VgCcgTc11B.1.177.210.000076
ORF1ab/nsp2205A205AgcCgcT11B.1.177.240.001295
ORF1ab/nsp2205A205VgCcgTc11B.1.177.50.001242
ORF1ab/nsp2205A205delGCC---11B.1.177.510.004566
ORF1ab/nsp2205A205delGCC---11B.1.177.540.000606
ORF1ab/nsp2205A205AgcCgcT11B.1.177.560.000668
ORF1ab/nsp2205A205VgCcgTc11B.1.177.560.000668
ORF1ab/nsp2205A205AgcCgcT11B.1.177.630.002703
ORF1ab/nsp2205A205AgcCgcT11B.1.177.70.000165
ORF1ab/nsp2205A205VgCcgTc11B.1.177.730.000566
ORF1ab/nsp2205A205delGCC---11B.1.177.730.000566
ORF1ab/nsp2205A205VgCcgTc11B.1.177.790.002342
ORF1ab/nsp2205A205AgcCgcT11B.1.177.860.000183
ORF1ab/nsp2205A205AgcCgcT11B.1.1790.003759
ORF1ab/nsp2205A205SGccTcc11B.1.20.000009
ORF1ab/nsp2205A205PGccCcc11B.1.2100.002132
ORF1ab/nsp2205A205VgCcgTc11B.1.214.20.0006
ORF1ab/nsp2205A205VgCcgTc11B.1.2340.000132
ORF1ab/nsp2205A205AgcCgcT11B.1.2400.000216
ORF1ab/nsp2205A205VgCcgTc11B.1.2410.000812
ORF1ab/nsp2205A205delGCC---11B.1.2420.018868
ORF1ab/nsp2205A205SGccTcc11B.1.2430.00007
ORF1ab/nsp2205A205VgCcgTc11B.1.2430.00007
ORF1ab/nsp2205A205AgcCgcT11B.1.2450.03125
ORF1ab/nsp2205A205SGccTcc11B.1.258.170.000104
ORF1ab/nsp2205A205VgCcgTc11B.1.258.30.001675
ORF1ab/nsp2205A205AgcCgcT11B.1.3010.005917
ORF1ab/nsp2205A205VgCcgTc11B.1.3300.028571
ORF1ab/nsp2205A205AgcCgcT11B.1.3400.004292
ORF1ab/nsp2205A205SGccTcc11B.1.3510.00003
ORF1ab/nsp2205A205AgcCgcT11B.1.351.20.000303
ORF1ab/nsp2205A205AgcCgcT11B.1.360.000146
ORF1ab/nsp2205A205VgCcgTc11B.1.36.10.00114
ORF1ab/nsp2205A205VgCcgTc11B.1.36.170.000494
ORF1ab/nsp2205A205AgcCgcT11B.1.36.170.000494
ORF1ab/nsp2205A205AgcCgcT11B.1.36.220.001208
ORF1ab/nsp2205A205AgcCgcT11B.1.36.240.006173
ORF1ab/nsp2205A205VgCcgTc11B.1.36.290.000517
ORF1ab/nsp2205A205TGccAcc11B.1.36.290.000517
ORF1ab/nsp2205A205AgcCgcT11B.1.36.310.001751
ORF1ab/nsp2205A205AgcCgcT11B.1.36.70.004
ORF1ab/nsp2205A205VgCcgTc11B.1.3620.001541
ORF1ab/nsp2205A205TGccAcc11B.1.3960.000706
ORF1ab/nsp2205A205VgCcgTc11B.1.4090.000781
ORF1ab/nsp2205A205AgcCgcT11B.1.4110.003704
ORF1ab/nsp2205A205AgcCgcT11B.1.4130.004255
ORF1ab/nsp2205A205TGccAcc11B.1.4160.001269
ORF1ab/nsp2205A205delGCC---11B.1.4290.000024
ORF1ab/nsp2205A205AgcCgcT11B.1.4620.007246
ORF1ab/nsp2205A205VgCcgTc11B.1.466.20.000391
ORF1ab/nsp2205A205TGccAcc11B.1.466.20.000391
ORF1ab/nsp2205A205TGccAcc11B.1.4730.019231
ORF1ab/nsp2205A205AgcCgcT11B.1.4970.000315
ORF1ab/nsp2205A205VgCcgTc11B.1.5090.000866
ORF1ab/nsp2205A205AgcCgcT11B.1.5240.001406
ORF1ab/nsp2205A205VgCcgTc11B.1.5250.000113
ORF1ab/nsp2205A205SGccTcc11B.1.5250.000113
ORF1ab/nsp2205A205DgCcgAc11B.1.5260.000024
ORF1ab/nsp2205A205SGccTcc11B.1.5260.000024
ORF1ab/nsp2205A205AgcCgcT11B.1.5300.007143
ORF1ab/nsp2205A205VgCcgTc11B.1.5380.008065
ORF1ab/nsp2205A205AgcCgcT11B.1.5510.00129
ORF1ab/nsp2205A205AgcCgcT11B.1.5570.05
ORF1ab/nsp2205A205VgCcgTc11B.1.5750.000303
ORF1ab/nsp2205A205VgCcgTc11B.1.5950.000261
ORF1ab/nsp2205A205VgCcgTc11B.1.6090.000479
ORF1ab/nsp2205A205delGCC---11B.1.617.20.000004
ORF1ab/nsp2205A205SGccTcc11B.1.617.20.000004
ORF1ab/nsp2205A205delGCC---11B.1.6210.000089
ORF1ab/nsp2205A205AgcCgcT11B.1.6250.002353
ORF1ab/nsp2205A205AgcCgcT11B.1.6280.000352
ORF1ab/nsp2205A205AgcCgcT11B.1.6330.041667
ORF1ab/nsp2205A205AgcCgcT11B.1.6340.003425
ORF1ab/nsp2205A205AgcCgcT11B.310.003731
ORF1ab/nsp2205A205AgcCgcT11B.40.002208
ORF1ab/nsp2205A205AgcCgcT11B.4.70.010101
ORF1ab/nsp2205A205AgcCgcA11B.6.30.026316
ORF1ab/nsp2205A205VgCcgTc11B.6.60.000889
ORF1ab/nsp2205A205AgcCgcT11C.10.002392
ORF1ab/nsp2205A205AgcCgcT11C.160.00106
ORF1ab/nsp2205A205AgcCgcT11C.230.005814
ORF1ab/nsp2205A205delGCC---11C.360.000911
ORF1ab/nsp2205A205VgCcgTc11C.360.000911
ORF1ab/nsp2205A205AgcCgcT11C.80.004464
ORF1ab/nsp2205A205SGccTcc11D.20.000075
ORF1ab/nsp2205A205VgCcgTc11D.20.000075
ORF1ab/nsp2205A205PGccCcc11D.20.000075
ORF1ab/nsp2205A205VgCcgTc11N.50.001767
ORF1ab/nsp2205A205VgCcgTc11N.60.007092
ORF1ab/nsp2205A205AgcCgcT11P.1.100.000269
ORF1ab/nsp2205A205VgCcgTc11P.1.110.010204
ORF1ab/nsp2205A205AgcCgcT11P.1.130.000898
ORF1ab/nsp2205A205TGccAcc11P.1.140.000048
ORF1ab/nsp2205A205AgcCgcT11P.1.20.001156
ORF1ab/nsp2205A205AgcCgcA11P.1.40.000977
ORF1ab/nsp2205A205AgcCgcT11Q.10.000126
ORF1ab/nsp2205A205delGCC---11Q.10.000126
ORF1ab/nsp2205A205VgCcgTc11Q.30.000145
ORF1ab/nsp2205A205AgcCgcT11Q.30.000145
ORF1ab/nsp2205A205VgCcgTc11Q.80.000165
ORF1ab/nsp2205A205delGCC---11U.30.003861