CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 205 | A205A | A385A | syn | gcC | gcT | 10235 | 10136 | 0.990327 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205A | A385A | syn | gcC | gcA | 10235 | 97 | 0.00947728 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205A | A385A | syn | gcC | gcG | 10235 | 2 | 0.000195408 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205V | A385V | nonsyn | gCc | gTc | 3442 | 3434 | 0.997676 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205V | A385V | nonsyn | gCC | gTT | 3442 | 8 | 0.00232423 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205T | A385T | nonsyn | Gcc | Acc | 450 | 450 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205del | A385del | del | GCC | --- | 73 | 73 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205S | A385S | nonsyn | Gcc | Tcc | 55 | 55 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205G | A385G | nonsyn | gCc | gGc | 20 | 20 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205D | A385D | nonsyn | gCc | gAc | 11 | 11 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205P | A385P | nonsyn | Gcc | Ccc | 6 | 6 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205del1 | A385del1 | del | gCc | g-c | 3 | 2 | 0.666667 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205del1 | A385del1 | del | GCc | -Ac | 3 | 1 | 0.333333 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205Y | A385Y | nonsyn | GCc | TAc | 1 | 1 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205N | A385N | nonsyn | GCc | AAc | 1 | 1 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205C | A385C | nonsyn | GCc | TGc | 1 | 1 | 1 | 1418-1420 |
ORF1ab/nsp2 | 205 | A205del2 | A385del2 | del | GCc | --c | 1 | 1 | 1 | 1418-1420 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 10136 | 10235 | All | 0.001939 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 97 | 10235 | All | 0.000019 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcG | 2 | 10235 | All | 0 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3434 | 3442 | All | 0.000657 |
ORF1ab/nsp2 | 205 | A205V | gCC | gTT | 8 | 3442 | All | 0.000002 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2839 | 2843 | B.1.617.2 | 0.01069 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 4 | 2843 | B.1.617.2 | 0.000015 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1331 | 1342 | B.1.1.7 | 0.001192 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 10 | 1342 | B.1.1.7 | 0.000009 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcG | 1 | 1342 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 833 | 837 | AY.4 | 0.001297 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 4 | 837 | AY.4 | 0.000006 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 818 | 818 | B.1.1.279 | 0.91704 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 802 | 804 | AY.102 | 0.021264 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 804 | AY.102 | 0.000053 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 450 | 450 | All | 0.000086 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 434 | 435 | P.1 | 0.006837 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 435 | P.1 | 0.000016 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 395 | 400 | AY.4 | 0.000615 |
ORF1ab/nsp2 | 205 | A205V | gCC | gTT | 5 | 400 | AY.4 | 0.000008 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 369 | 372 | AY.43 | 0.001635 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 3 | 372 | AY.43 | 0.000013 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 365 | 365 | B.1.1.83 | 0.98916 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 365 | 365 | B.1.628 | 0.128612 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 314 | 314 | R.1 | 0.028263 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 237 | 237 | AY.25 | 0.001426 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 177 | 178 | AY.39 | 0.004374 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 178 | AY.39 | 0.000025 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 178 | 178 | B.1.1.7 | 0.000159 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 169 | 169 | P.1.14 | 0.008078 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 165 | 165 | AY.33 | 0.011018 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 151 | 151 | AY.16 | 0.057327 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 142 | 142 | AY.44 | 0.000864 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 119 | 130 | B.1.2 | 0.001048 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 11 | 130 | B.1.2 | 0.000097 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 118 | 118 | B.1.595 | 0.030793 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 113 | 113 | B.1.429 | 0.002659 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 109 | 109 | AY.3 | 0.001084 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 94 | 95 | B.1 | 0.000861 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 95 | B.1 | 0.000009 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 86 | 94 | AY.103 | 0.000534 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 8 | 94 | AY.103 | 0.00005 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 92 | 92 | AY.44 | 0.00056 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 86 | 86 | R.1 | 0.007741 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 75 | 75 | AY.4.2 | 0.001627 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 75 | 75 | B.1.221 | 0.005327 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 73 | 73 | All | 0.000014 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 71 | 71 | B.1.1 | 0.001288 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 67 | 67 | AY.44 | 0.000408 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 66 | 66 | AY.14 | 0.005809 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 65 | 65 | AY.25 | 0.000391 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 63 | 63 | B.1.612 | 0.167109 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 61 | 61 | B.1.1.7 | 0.000055 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 58 | 58 | AY.117 | 0.004902 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 54 | 56 | AY.23 | 0.003766 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 56 | AY.23 | 0.000139 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 55 | 55 | All | 0.000011 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 53 | 53 | AY.34.1 | 0.027027 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 50 | 52 | B.1.351 | 0.001486 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 52 | B.1.351 | 0.000059 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 49 | 51 | AY.119 | 0.00173 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 51 | AY.119 | 0.000071 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 45 | 46 | AY.3 | 0.000448 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 46 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 45 | 46 | B.1.427 | 0.002272 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 46 | B.1.427 | 0.00005 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 45 | 45 | A.21 | 0.124654 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 44 | 44 | AY.121 | 0.005954 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 44 | 44 | AY.46.6 | 0.003177 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 44 | 44 | B.1.617.2 | 0.000166 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 43 | 43 | P.1 | 0.000677 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 42 | 42 | AY.4.2 | 0.000911 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 40 | 40 | B.1.1.1 | 0.013068 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 39 | 39 | B.1.617.2 | 0.000147 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 35 | 35 | B.1.1.25 | 0.019898 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 33 | 34 | AY.103 | 0.000205 |
ORF1ab/nsp2 | 205 | A205V | gCC | gTT | 1 | 34 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 34 | 34 | AY.59 | 0.018008 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 33 | 34 | B.1.2 | 0.000291 |
ORF1ab/nsp2 | 205 | A205V | gCC | gTT | 1 | 34 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 33 | 33 | B.1 | 0.000302 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 33 | 33 | B.1.369 | 0.009412 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 32 | 32 | B.1.177 | 0.000421 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 30 | 30 | AY.120 | 0.001115 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 26 | 26 | AY.47 | 0.000809 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 25 | 26 | B.1.1 | 0.000454 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 26 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 26 | 26 | P.1.15 | 0.006041 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 23 | 23 | B.1.351 | 0.000684 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 22 | 22 | B.1.1.7 | 0.00002 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 21 | 21 | AY.46 | 0.002186 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 21 | AY.5 | 0.000351 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 4 | 21 | AY.5 | 0.000083 |
ORF1ab/nsp2 | 205 | A205G | gCc | gGc | 20 | 20 | All | 0.000004 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 20 | 20 | AY.4 | 0.000031 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 20 | 20 | B.1.177 | 0.000263 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 19 | 19 | AY.36 | 0.002816 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 18 | AY.42 | 0.000684 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcG | 1 | 18 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 205 | A205G | gCc | gGc | 18 | 18 | B.1.1.7 | 0.000016 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 18 | 18 | B.1.470 | 0.025281 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 17 | 17 | AD.2 | 0.003722 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 17 | AY.20 | 0.000661 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 17 | 17 | AY.4 | 0.000026 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 17 | AY.45 | 0.002069 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 17 | AY.73 | 0.011311 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 17 | 17 | C.37 | 0.001973 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 16 | 16 | AY.98 | 0.001264 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 16 | 16 | B.1.1.37 | 0.003086 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 16 | 16 | B.1.402 | 0.156863 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 16 | 16 | B.1.526 | 0.000376 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | AY.116 | 0.004302 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 15 | 15 | AY.43 | 0.000066 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | AY.77 | 0.016911 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | AY.9.2 | 0.000551 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | B.1.177.52 | 0.026362 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | B.1.582 | 0.00736 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 15 | 15 | B.1.621 | 0.001328 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 14 | 14 | AY.100 | 0.000644 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 14 | 14 | AY.102 | 0.000371 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 14 | 14 | AY.13 | 0.002254 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 14 | 14 | B.1.258.17 | 0.001456 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 14 | 14 | B.1.36.18 | 0.005882 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 14 | 14 | B.1.400 | 0.006006 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 13 | 13 | B.1.177.79 | 0.030445 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 13 | 13 | B.1.429 | 0.000306 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | AY.111 | 0.002198 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 12 | 12 | AY.26 | 0.00034 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | B.1.1.258 | 0.039088 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | B.1.177.81 | 0.002272 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | B.1.234 | 0.001583 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | B.1.36.25 | 0.02649 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 12 | 12 | P.1.14 | 0.000574 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 11 | 11 | All | 0.000002 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 11 | 11 | AY.120.1 | 0.003531 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 11 | 11 | B.1.1.222 | 0.002244 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 11 | 11 | B.1.36.18 | 0.004622 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 11 | 11 | N.5 | 0.019435 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 10 | 10 | AY.5 | 0.000206 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 10 | 10 | B.1 | 0.000092 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 9 | 9 | B.1.1.306 | 0.003946 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 9 | 9 | B.1.177.4 | 0.0019 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 9 | 9 | B.1.617.1 | 0.001161 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 8 | AY.26 | 0.000142 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 3 | 8 | AY.26 | 0.000085 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 8 | 8 | AY.3 | 0.00008 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 8 | 8 | AY.4 | 0.000012 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 8 | 8 | AY.46.6 | 0.000578 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 8 | 8 | AY.5.3 | 0.002699 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 8 | 8 | AY.69 | 0.001493 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 8 | 8 | AY.84 | 0.0035 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 8 | 8 | B.1.1.241 | 0.016563 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 8 | B.1.160 | 0.000218 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 8 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 8 | B.1.36.1 | 0.007982 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 8 | B.1.36.1 | 0.00114 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 7 | 7 | A.2.5.2 | 0.011006 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | AY.109 | 0.005178 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | AY.29.1 | 0.001544 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | AY.4.5 | 0.000752 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 7 | 7 | AY.42 | 0.000282 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | AY.6 | 0.000288 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 7 | AY.75 | 0.000336 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 7 | AY.75 | 0.000056 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | B.1.1.318 | 0.002112 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 7 | 7 | B.1.429 | 0.000165 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | B.1.525 | 0.000792 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | C.35 | 0.005418 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 7 | 7 | Q.8 | 0.001154 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 6 | 0.222222 | |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 6 | 0.111111 | |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 6 | 6 | All | 0.000001 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | AY.46.4 | 0.000987 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | AY.5.3 | 0.002024 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 6 | 6 | AY.53 | 0.001725 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.1.277 | 0.004552 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 6 | 6 | B.1.1.294 | 0.007595 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.1.33 | 0.002525 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 6 | 6 | B.1.1.519 | 0.000238 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | B.1.541 | 0.026549 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 6 | 6 | P.2 | 0.00112 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | A.2 | 0.003309 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | AD.2 | 0.001095 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | AY.46.1 | 0.005133 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | AY.96 | 0.010373 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | B | 0.000639 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 5 | 5 | B.1.1.33 | 0.002104 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | B.1.1.337 | 0.017986 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | B.1.1.50 | 0.003394 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 5 | 5 | B.1.239 | 0.006105 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | B.1.241 | 0.004058 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | B.1.516 | 0.009785 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | AY.110 | 0.000451 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 4 | AY.39.1 | 0.000119 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 4 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | AY.46.2 | 0.002541 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | AY.68 | 0.001095 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | AY.7.1 | 0.000451 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 4 | 4 | B.1.1.141 | 0.008048 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 4 | 4 | B.1.1.377 | 0.005525 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 4 | 4 | B.1.236 | 0.008214 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | B.1.338 | 0.034483 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 4 | 4 | B.1.36.29 | 0.002069 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 4 | 4 | P.3 | 0.00638 |
ORF1ab/nsp2 | 205 | A205del1 | gCc | g-c | 2 | 3 | All | 0 |
ORF1ab/nsp2 | 205 | A205del1 | GCc | -Ac | 1 | 3 | All | 0 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | AP.1 | 0.004505 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.41 | 0.000882 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.87 | 0.002498 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.1.434 | 0.001046 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.1.521 | 0.016043 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 3 | 3 | B.1.177.23 | 0.009709 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.177.33 | 0.004934 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.177.53 | 0.007177 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.177.6 | 0.00293 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 3 | B.1.177.73 | 0.001133 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 3 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.177.88 | 0.037037 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.298 | 0.006342 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | B.1.361 | 0.003866 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.399 | 0.005803 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.416 | 0.003807 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.597 | 0.013889 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.1.599 | 0.010949 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 3 | B.1.637 | 0.000146 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 3 | B.1.637 | 0.000073 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | C.32 | 0.069767 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp2 | 205 | A205del1 | gCc | g-c | 2 | 2 | 0.111111 | |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AE.1 | 0.022727 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.49 | 0.00639 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.50 | 0.001599 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B | 0.000256 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.135 | 0.00939 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.163 | 0.015267 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 2 | B.1.1.207 | 0.001182 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 2 | B.1.1.207 | 0.001182 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.1.298 | 0.001724 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 2 | B.1.1.306 | 0.000438 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 2 | B.1.1.306 | 0.000438 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.337 | 0.007194 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.369 | 0.000892 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.1.517 | 0.013605 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.378 | 0.013699 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.389 | 0.002004 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.443 | 0.009346 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.1.620 | 0.001892 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AA.7 | 0.009174 |
ORF1ab/nsp2 | 205 | A205C | GCc | TGc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 205 | A205del2 | GCc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 205 | A205Y | GCc | TAc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 205 | A205N | GCc | AAc | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp2 | 205 | A205Y | GCc | TAc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 205 | A205V | gCC | gTT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 205 | A205C | GCc | TGc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 205 | A205del1 | GCc | -Ac | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp2 | 205 | A205G | gCc | gGc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 205 | A205G | gCc | gGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.169 | 0.018182 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.1.429 | 0.004608 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | B.1.1.482 | 0.023256 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp2 | 205 | A205del2 | GCc | --c | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 205 | A205N | GCc | AAc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.118 | 0.006711 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.24 | 0.001295 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.245 | 0.03125 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.330 | 0.028571 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | B.1.473 | 0.019231 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp2 | 205 | A205D | gCc | gAc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.557 | 0.05 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | B.4.7 | 0.010101 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 1 | B.6.3 | 0.026316 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | C.8 | 0.004464 |
ORF1ab/nsp2 | 205 | A205S | Gcc | Tcc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 205 | A205P | Gcc | Ccc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | P.1.11 | 0.010204 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp2 | 205 | A205T | Gcc | Acc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcA | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp2 | 205 | A205A | gcC | gcT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp2 | 205 | A205V | gCc | gTc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp2 | 205 | A205del | GCC | --- | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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