CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 185

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2185V185IV365InonsynGttAtt2613261311358-1360
ORF1ab/nsp2185V185FV365FnonsynGttTtt82482411358-1360
ORF1ab/nsp2185V185VV365VsyngtTgtC118780.6610171358-1360
ORF1ab/nsp2185V185VV365VsyngtTgtA118230.1949151358-1360
ORF1ab/nsp2185V185VV365VsyngtTgtG118170.1440681358-1360
ORF1ab/nsp2185V185AV365AnonsyngTtgCt1131120.991151358-1360
ORF1ab/nsp2185V185AV365AnonsyngTTgCC11310.008849561358-1360
ORF1ab/nsp2185V185delV365deldelGTT---505011358-1360
ORF1ab/nsp2185V185LV365LnonsynGttCtt303011358-1360
ORF1ab/nsp2185V185del1V365del1delGtt-tt860.751358-1360
ORF1ab/nsp2185V185del1V365del1delgtTgt-810.1251358-1360
ORF1ab/nsp2185V185del1V365del1delgTTgC-810.1251358-1360
ORF1ab/nsp2185V185GV365GnonsyngTtgGt7711358-1360
ORF1ab/nsp2185V185DV365DnonsyngTtgAt1111358-1360
ORF1ab/nsp2185V185PV365PnonsynGTtCCt1111358-1360

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2185V185IGttAtt26132613All0.0005
ORF1ab/nsp2185V185IGttAtt16481648B.1.20.014511
ORF1ab/nsp2185V185FGttTtt824824All0.000158
ORF1ab/nsp2185V185IGttAtt642642AY.40.000999
ORF1ab/nsp2185V185FGttTtt371371B.1.258.220.989333
ORF1ab/nsp2185V185FGttTtt135135B.1.2580.008984
ORF1ab/nsp2185V185VgtTgtC78118All0.000015
ORF1ab/nsp2185V185VgtTgtA23118All0.000004
ORF1ab/nsp2185V185VgtTgtG17118All0.000003
ORF1ab/nsp2185V185AgTtgCt112113All0.000021
ORF1ab/nsp2185V185AgTTgCC1113All0
ORF1ab/nsp2185V185FGttTtt104104B.1.1.70.000093
ORF1ab/nsp2185V185IGttAtt6060B.1.1770.00079
ORF1ab/nsp2185V185IGttAtt5454B.1.1.70.000048
ORF1ab/nsp2185V185delGTT---5050All0.00001
ORF1ab/nsp2185V185AgTtgCt3536B.1.1.70.000031
ORF1ab/nsp2185V185AgTTgCC136B.1.1.70.000001
ORF1ab/nsp2185V185LGttCtt3030All0.000006
ORF1ab/nsp2185V185IGttAtt2929AY.430.000128
ORF1ab/nsp2185V185LGttCtt2626AY.250.000156
ORF1ab/nsp2185V185VgtTgtC2526AY.40.000039
ORF1ab/nsp2185V185VgtTgtA126AY.40.000002
ORF1ab/nsp2185V185FGttTtt2323AY.40.000036
ORF1ab/nsp2185V185VgtTgtC1323B.1.1.70.000012
ORF1ab/nsp2185V185VgtTgtA623B.1.1.70.000005
ORF1ab/nsp2185V185VgtTgtG423B.1.1.70.000004
ORF1ab/nsp2185V185IGttAtt1919B.1.617.20.000072
ORF1ab/nsp2185V185FGttTtt1818B.1.1.2770.013657
ORF1ab/nsp2185V185IGttAtt1818B.1.3510.000535
ORF1ab/nsp2185V185FGttTtt1818P.20.003359
ORF1ab/nsp2185V185AgTtgCt1717AY.40.000026
ORF1ab/nsp2185V185VgtTgtG1017AY.440.000061
ORF1ab/nsp2185V185VgtTgtC717AY.440.000043
ORF1ab/nsp2185V185IGttAtt1616B.1.2210.001137
ORF1ab/nsp2185V185FGttTtt1616B.1.5250.001811
ORF1ab/nsp2185V185IGttAtt1414B.1.5960.00122
ORF1ab/nsp2185V185IGttAtt1313B.1.1.3970.029279
ORF1ab/nsp2185V185IGttAtt1212AY.250.000072
ORF1ab/nsp2185V185VgtTgtC1212B.1.617.20.000045
ORF1ab/nsp2185V185AgTtgCt1111B.1.9.50.0625
ORF1ab/nsp2185V185FGttTtt1010AY.1030.000062
ORF1ab/nsp2185V185FGttTtt1010AY.400.009643
ORF1ab/nsp2185V185FGttTtt1010B.1.177.600.002184
ORF1ab/nsp2185V185FGttTtt99B.1.617.20.000034
ORF1ab/nsp2185V185del1Gtt-tt68All0.000001
ORF1ab/nsp2185V185del1gTTgC-18All0
ORF1ab/nsp2185V185del1gtTgt-18All0
ORF1ab/nsp2185V185FGttTtt88AY.1020.000212
ORF1ab/nsp2185V185IGttAtt88AY.440.000049
ORF1ab/nsp2185V185GgTtgGt77All0.000001
ORF1ab/nsp2185V185IGttAtt77AY.60.000288
ORF1ab/nsp2185V185AgTtgCt66AY.250.000036
ORF1ab/nsp2185V185FGttTtt66AY.440.000037
ORF1ab/nsp2185V185FGttTtt66B.1.4700.008427
ORF1ab/nsp2185V185IGttAtt66P.10.000095
ORF1ab/nsp2185V185VgtTgtC56P.10.000079
ORF1ab/nsp2185V185VgtTgtA16P.10.000016
ORF1ab/nsp2185V185AgTtgCt55B.10.000046
ORF1ab/nsp2185V185delGTT---55B.10.000046
ORF1ab/nsp2185V185delGTT---55B.1.1.330.002104
ORF1ab/nsp2185V185delGTT---55B.1.1.70.000004
ORF1ab/nsp2185V185AgTtgCt44AY.1000.000184
ORF1ab/nsp2185V185AgTtgCt44AY.1030.000025
ORF1ab/nsp2185V185FGttTtt44AY.30.00004
ORF1ab/nsp2185V185VgtTgtA44AY.30.00004
ORF1ab/nsp2185V185IGttAtt44AY.330.000267
ORF1ab/nsp2185V185FGttTtt44B.10.000037
ORF1ab/nsp2185V185IGttAtt44B.10.000037
ORF1ab/nsp2185V185VgtTgtA24B.1.10.000036
ORF1ab/nsp2185V185VgtTgtC14B.1.10.000018
ORF1ab/nsp2185V185VgtTgtG14B.1.10.000018
ORF1ab/nsp2185V185FGttTtt44B.1.1.3180.001207
ORF1ab/nsp2185V185VgtTgtA44B.1.1.5190.000159
ORF1ab/nsp2185V185AgTtgCt44B.1.1770.000053
ORF1ab/nsp2185V185FGttTtt44B.1.1770.000053
ORF1ab/nsp2185V185FGttTtt44B.1.20.000035
ORF1ab/nsp2185V185FGttTtt44P.10.000063
ORF1ab/nsp2185V185IGttAtt33AY.260.000085
ORF1ab/nsp2185V185AgTtgCt33AY.390.000074
ORF1ab/nsp2185V185IGttAtt33AY.390.000074
ORF1ab/nsp2185V185FGttTtt33AY.740.000347
ORF1ab/nsp2185V185IGttAtt33AY.790.003632
ORF1ab/nsp2185V185delGTT---33B.1.1.3480.002389
ORF1ab/nsp2185V185VgtTgtC33B.1.1600.000094
ORF1ab/nsp2185V185IGttAtt33B.1.36.290.001552
ORF1ab/nsp2185V185FGttTtt33B.1.617.10.000387
ORF1ab/nsp2185V185delGTT---33B.1.617.20.000011
ORF1ab/nsp2185V185IGttAtt33C.370.000348
ORF1ab/nsp2185V185FGttTtt33P.1.140.000143
ORF1ab/nsp2185V185IGttAtt220.111111
ORF1ab/nsp2185V185FGttTtt220.111111
ORF1ab/nsp2185V185IGttAtt22AY.1030.000012
ORF1ab/nsp2185V185IGttAtt22AY.200.000078
ORF1ab/nsp2185V185FGttTtt22AY.250.000012
ORF1ab/nsp2185V185FGttTtt22AY.260.000057
ORF1ab/nsp2185V185AgTtgCt22AY.30.00002
ORF1ab/nsp2185V185delGTT---22AY.440.000012
ORF1ab/nsp2185V185IGttAtt22AY.540.000191
ORF1ab/nsp2185V185FGttTtt22AY.60.000082
ORF1ab/nsp2185V185IGttAtt22AY.610.00021
ORF1ab/nsp2185V185IGttAtt22AY.98.10.000097
ORF1ab/nsp2185V185IGttAtt22B.1.1.4340.000697
ORF1ab/nsp2185V185AgTtgCt22B.1.20.000018
ORF1ab/nsp2185V185FGttTtt22B.1.36.380.003284
ORF1ab/nsp2185V185IGttAtt22B.1.4270.000101
ORF1ab/nsp2185V185FGttTtt22B.1.6210.000177
ORF1ab/nsp2185V185FGttTtt22C.370.000232
ORF1ab/nsp2185V185FGttTtt22D.20.00015
ORF1ab/nsp2185V185del1Gtt-tt22D.20.00015
ORF1ab/nsp2185V185delGTT---22N.60.014184
ORF1ab/nsp2185V185delGTT---22P.20.000373
ORF1ab/nsp2185V185IGttAtt11AD.20.000219
ORF1ab/nsp2185V185DgTtgAt11All0
ORF1ab/nsp2185V185PGTtCCt11All0
ORF1ab/nsp2185V185VgtTgtG11AY.10.000396
ORF1ab/nsp2185V185FGttTtt11AY.1010.00049
ORF1ab/nsp2185V185AgTtgCt11AY.1020.000027
ORF1ab/nsp2185V185del1Gtt-tt11AY.1030.000006
ORF1ab/nsp2185V185VgtTgtC11AY.1160.000287
ORF1ab/nsp2185V185FGttTtt11AY.116.10.000311
ORF1ab/nsp2185V185IGttAtt11AY.1180.000063
ORF1ab/nsp2185V185delGTT---11AY.1200.000037
ORF1ab/nsp2185V185IGttAtt11AY.1200.000037
ORF1ab/nsp2185V185AgTtgCt11AY.120.10.000321
ORF1ab/nsp2185V185IGttAtt11AY.120.10.000321
ORF1ab/nsp2185V185IGttAtt11AY.1210.000135
ORF1ab/nsp2185V185delGTT---11AY.190.00114
ORF1ab/nsp2185V185AgTtgCt11AY.20.000356
ORF1ab/nsp2185V185VgtTgtC11AY.230.00007
ORF1ab/nsp2185V185FGttTtt11AY.290.000016
ORF1ab/nsp2185V185IGttAtt11AY.290.000016
ORF1ab/nsp2185V185IGttAtt11AY.30.00001
ORF1ab/nsp2185V185VgtTgtC11AY.330.000067
ORF1ab/nsp2185V185AgTtgCt11AY.330.000067
ORF1ab/nsp2185V185AgTtgCt11AY.340.000097
ORF1ab/nsp2185V185FGttTtt11AY.340.000097
ORF1ab/nsp2185V185FGttTtt11AY.350.000233
ORF1ab/nsp2185V185delGTT---11AY.350.000233
ORF1ab/nsp2185V185FGttTtt11AY.380.000499
ORF1ab/nsp2185V185delGTT---11AY.40.000002
ORF1ab/nsp2185V185LGttCtt11AY.40.000002
ORF1ab/nsp2185V185GgTtgGt11AY.40.000002
ORF1ab/nsp2185V185IGttAtt11AY.4.20.000022
ORF1ab/nsp2185V185IGttAtt11AY.4.30.000842
ORF1ab/nsp2185V185GgTtgGt11AY.4.50.000107
ORF1ab/nsp2185V185IGttAtt11AY.420.00004
ORF1ab/nsp2185V185FGttTtt11AY.420.00004
ORF1ab/nsp2185V185FGttTtt11AY.430.000004
ORF1ab/nsp2185V185delGTT---11AY.430.000004
ORF1ab/nsp2185V185VgtTgtA11AY.450.000122
ORF1ab/nsp2185V185IGttAtt11AY.450.000122
ORF1ab/nsp2185V185delGTT---11AY.460.000104
ORF1ab/nsp2185V185FGttTtt11AY.46.60.000072
ORF1ab/nsp2185V185IGttAtt11AY.46.60.000072
ORF1ab/nsp2185V185GgTtgGt11AY.60.000041
ORF1ab/nsp2185V185FGttTtt11AY.610.000105
ORF1ab/nsp2185V185FGttTtt11AY.70.000196
ORF1ab/nsp2185V185VgtTgtC11AY.750.000056
ORF1ab/nsp2185V185delGTT---11AY.750.000056
ORF1ab/nsp2185V185delGTT---11AY.75.10.00018
ORF1ab/nsp2185V185AgTtgCt11AY.75.10.00018
ORF1ab/nsp2185V185IGttAtt11AY.780.001541
ORF1ab/nsp2185V185IGttAtt11AY.9.20.000037
ORF1ab/nsp2185V185DgTtgAt11B.10.000009
ORF1ab/nsp2185V185LGttCtt11B.10.000009
ORF1ab/nsp2185V185VgtTgtA11B.10.000009
ORF1ab/nsp2185V185del1Gtt-tt11B.10.000009
ORF1ab/nsp2185V185GgTtgGt11B.1.10.000018
ORF1ab/nsp2185V185delGTT---11B.1.10.000018
ORF1ab/nsp2185V185del1Gtt-tt11B.1.10.000018
ORF1ab/nsp2185V185AgTtgCt11B.1.10.000018
ORF1ab/nsp2185V185IGttAtt11B.1.10.000018
ORF1ab/nsp2185V185IGttAtt11B.1.1.10.000327
ORF1ab/nsp2185V185FGttTtt11B.1.1.1530.001095
ORF1ab/nsp2185V185IGttAtt11B.1.1.2430.004082
ORF1ab/nsp2185V185FGttTtt11B.1.1.2840.000107
ORF1ab/nsp2185V185FGttTtt11B.1.1.2980.000862
ORF1ab/nsp2185V185FGttTtt11B.1.1.3060.000438
ORF1ab/nsp2185V185delGTT---11B.1.1.3150.008475
ORF1ab/nsp2185V185delGTT---11B.1.1.3370.003597
ORF1ab/nsp2185V185IGttAtt11B.1.1.3620.005618
ORF1ab/nsp2185V185VgtTgtC11B.1.1.3850.004464
ORF1ab/nsp2185V185AgTtgCt11B.1.1.390.00051
ORF1ab/nsp2185V185AgTtgCt11B.1.1.4060.006494
ORF1ab/nsp2185V185FGttTtt11B.1.1.4340.000349
ORF1ab/nsp2185V185delGTT---11B.1.1.4480.002033
ORF1ab/nsp2185V185FGttTtt11B.1.1.5190.00004
ORF1ab/nsp2185V185del1gTTgC-11B.1.1.70.000001
ORF1ab/nsp2185V185VgtTgtC11B.1.1.700.000341
ORF1ab/nsp2185V185AgTtgCt11B.1.1040.00369
ORF1ab/nsp2185V185AgTtgCt11B.1.1200.007692
ORF1ab/nsp2185V185PGTtCCt11B.1.1200.007692
ORF1ab/nsp2185V185LGttCtt11B.1.1200.007692
ORF1ab/nsp2185V185delGTT---11B.1.1400.018868
ORF1ab/nsp2185V185FGttTtt11B.1.1460.004237
ORF1ab/nsp2185V185FGttTtt11B.1.1600.000031
ORF1ab/nsp2185V185FGttTtt11B.1.1650.011905
ORF1ab/nsp2185V185del1Gtt-tt11B.1.1770.000013
ORF1ab/nsp2185V185AgTtgCt11B.1.177.40.000211
ORF1ab/nsp2185V185delGTT---11B.1.177.510.004566
ORF1ab/nsp2185V185delGTT---11B.1.177.730.000566
ORF1ab/nsp2185V185GgTtgGt11B.1.20.000009
ORF1ab/nsp2185V185delGTT---11B.1.20.000009
ORF1ab/nsp2185V185VgtTgtC11B.1.20.000009
ORF1ab/nsp2185V185del1gtTgt-11B.1.20.000009
ORF1ab/nsp2185V185IGttAtt11B.1.2060.000816
ORF1ab/nsp2185V185AgTtgCt11B.1.2210.000071
ORF1ab/nsp2185V185FGttTtt11B.1.2320.000537
ORF1ab/nsp2185V185VgtTgtA11B.1.2340.000132
ORF1ab/nsp2185V185IGttAtt11B.1.2410.000812
ORF1ab/nsp2185V185delGTT---11B.1.2420.018868
ORF1ab/nsp2185V185IGttAtt11B.1.2430.00007
ORF1ab/nsp2185V185delGTT---11B.1.2580.000067
ORF1ab/nsp2185V185AgTtgCt11B.1.2580.000067
ORF1ab/nsp2185V185IGttAtt11B.1.2980.002114
ORF1ab/nsp2185V185VgtTgtC11B.1.3060.005714
ORF1ab/nsp2185V185GgTtgGt11B.1.3320.003497
ORF1ab/nsp2185V185IGttAtt11B.1.3360.002439
ORF1ab/nsp2185V185VgtTgtC11B.1.3510.00003
ORF1ab/nsp2185V185FGttTtt11B.1.36.290.000517
ORF1ab/nsp2185V185FGttTtt11B.1.36.310.001751
ORF1ab/nsp2185V185IGttAtt11B.1.3610.001289
ORF1ab/nsp2185V185LGttCtt11B.1.416.10.001563
ORF1ab/nsp2185V185VgtTgtA11B.1.4290.000024
ORF1ab/nsp2185V185FGttTtt11B.1.4290.000024
ORF1ab/nsp2185V185delGTT---11B.1.4290.000024
ORF1ab/nsp2185V185VgtTgtA11B.1.466.20.000391
ORF1ab/nsp2185V185VgtTgtC11B.1.5150.014493
ORF1ab/nsp2185V185IGttAtt11B.1.5200.021739
ORF1ab/nsp2185V185IGttAtt11B.1.5260.000024
ORF1ab/nsp2185V185VgtTgtG11B.1.5260.000024
ORF1ab/nsp2185V185delGTT---11B.1.5610.000397
ORF1ab/nsp2185V185AgTtgCt11B.1.5640.000426
ORF1ab/nsp2185V185IGttAtt11B.1.5800.004065
ORF1ab/nsp2185V185FGttTtt11B.1.5950.000261
ORF1ab/nsp2185V185delGTT---11B.1.5960.000087
ORF1ab/nsp2185V185FGttTtt11B.1.5960.000087
ORF1ab/nsp2185V185AgTtgCt11B.1.617.20.000004
ORF1ab/nsp2185V185delGTT---11B.1.6210.000089
ORF1ab/nsp2185V185VgtTgtC11B.1.6210.000089
ORF1ab/nsp2185V185FGttTtt11B.1.6280.000352
ORF1ab/nsp2185V185FGttTtt11B.1.9.50.005682
ORF1ab/nsp2185V185AgTtgCt11B.40.002208
ORF1ab/nsp2185V185GgTtgGt11B.400.000364
ORF1ab/nsp2185V185delGTT---11C.360.000911
ORF1ab/nsp2185V185FGttTtt11C.360.000911
ORF1ab/nsp2185V185AgTtgCt11D.20.000075
ORF1ab/nsp2185V185AgTtgCt11P.10.000016
ORF1ab/nsp2185V185FGttTtt11P.1.170.000162
ORF1ab/nsp2185V185IGttAtt11P.20.000187
ORF1ab/nsp2185V185FGttTtt11R.10.00009
ORF1ab/nsp2185V185VgtTgtC11R.10.00009